Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001655g0250 Nicotiana tabacum HOM05D004223 ORTHO05D004792 3.4e-229 798.1 445 100.0
Nitab4.5_0001040g0160 Nicotiana tabacum HOM05D004223 ORTHO05D004792 2.1e-170 602.8 447 77.2
Sopen02g019940 Solanum pennellii HOM05D004223 ORTHO05D004792 2.0e-165 586.3 445 72.6
Solyc02g070860.4 Solanum lycopersicum HOM05D004223 ORTHO05D004792 2.7e-165 585.9 445 72.4
CAN.G257.3 Capsicum annuum HOM05D004223 ORTHO05D004792 7.0e-158 561.2 445 69.4
Actinidia19511 Actinidia chinensis HOM05D004223 ORTHO05D004792 3.6e-138 495.7 447 60.4
Dinv32277 Davidia involucrata HOM05D004223 ORTHO05D004792 1.4e-137 493.8 440 61.8
Actinidia07682 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.2e-128 464.2 449 57.2
Dinv30715 Davidia involucrata HOM05D004223 ORTHO05D004792 1.2e-128 464.2 299 79.6
Oeu019944.1 Olea europaea HOM05D004223 ORTHO05D004792 1.5e-128 463.8 440 59.3
Cc09_g08890 Coffea canephora HOM05D004223 ORTHO05D004792 1.1e-126 457.6 439 57.6
Peaxi162Scf00214g01114 Petunia axillaris HOM05D004223 ORTHO05D004792 1.6e-125 453.8 284 84.9
GSVIVG01021418001 Vitis vinifera HOM05D004223 ORTHO05D004792 3.3e-123 446.0 449 56.8
DCAR_027947 Daucus carota HOM05D004223 ORTHO05D004792 1.6e-122 443.7 447 56.4
Prupe.4G077600 Prunus persica HOM05D004223 ORTHO05D004792 5.8e-120 435.3 449 53.7
Migut.M00929 Erythranthe guttata HOM05D004223 ORTHO05D004792 9.9e-120 434.5 441 56.0
Nn3g20665 Nelumbo nucifera HOM05D004223 ORTHO05D004792 4.6e-117 425.6 449 53.2
RcHm_v2.0_Chr5g0013511 Rosa chinensis HOM05D004223 ORTHO05D004792 8.7e-116 421.4 454 55.1
Migut.H01375 Erythranthe guttata HOM05D004223 ORTHO05D004792 1.1e-115 421.0 448 55.6
HanXRQChr04g0118281 Helianthus annuus HOM05D004223 ORTHO05D004792 2.5e-115 419.9 447 55.0
MD05G1287300 Malus domestica HOM05D004223 ORTHO05D004792 5.6e-115 418.7 451 52.8
Ciclev10015725m.g Citrus clementina HOM05D004223 ORTHO05D004792 6.9e-113 411.8 452 53.1
Gohir.D10G040000 Gossypium hirsutum HOM05D004223 ORTHO05D004792 2.6e-112 409.8 450 52.7
Gorai.011G042100 Gossypium raimondii HOM05D004223 ORTHO05D004792 2.6e-112 409.8 450 52.7
Rhsim02G0155900 Rhododendron simsii HOM05D004223 ORTHO05D004792 2.6e-112 409.8 283 72.8
MD10G1264700 Malus domestica HOM05D004223 ORTHO05D004792 3.4e-112 409.5 451 52.5
CANSAT35G1433 Cannabis sativa HOM05D004223 ORTHO05D004792 4.4e-112 409.1 452 52.0
Duzib235G1300 Durio zibethinus HOM05D004223 ORTHO05D004792 3.8e-111 406.0 443 54.2
QL05p059118 Quercus lobata HOM05D004223 ORTHO05D004792 1.4e-110 404.1 449 52.3
FvH4_3g05960 Fragaria vesca HOM05D004223 ORTHO05D004792 2.4e-110 403.3 454 52.9
Cfa023352 Carpinus fangiana HOM05D004223 ORTHO05D004792 3.2e-110 402.9 441 51.2
PSO675G0042 Papaver somniferum HOM05D004223 ORTHO05D004792 4.2e-110 402.5 454 51.1
PSO541G2658 Papaver somniferum HOM05D004223 ORTHO05D004792 5.4e-110 402.1 454 51.1
Thecc.06G153700 Theobroma cacao HOM05D004223 ORTHO05D004792 5.4e-110 402.1 450 52.9
Gohir.A10G039200 Gossypium hirsutum HOM05D004223 ORTHO05D004792 1.7e-108 397.1 444 52.0
CiPaw.10G093300 Carya illinoinensis HOM05D004223 ORTHO05D004792 3.9e-108 396.0 449 51.7
arahy.Tifrunner.gnm1.ann1.EM1NUG Arachis hypogaea HOM05D004223 ORTHO05D004792 6.6e-108 395.2 448 50.0
Manes.17G067700 Manihot esculenta HOM05D004223 ORTHO05D004792 6.6e-108 395.2 450 51.1
arahy.Tifrunner.gnm1.ann1.KB83YE Arachis hypogaea HOM05D004223 ORTHO05D004792 7.3e-107 391.7 448 49.6
Aqoxy1G01765 Aquilegia oxysepala HOM05D004223 ORTHO05D004792 2.8e-106 389.8 441 50.6
PGR042G0116 Punica granatum HOM05D004223 ORTHO05D004792 8.1e-106 388.3 455 50.5
Ciclev10031935m.g Citrus clementina HOM05D004223 ORTHO05D004792 1.5e-104 384.0 442 49.5
Lj4g0000090 Lotus japonicus HOM05D004223 ORTHO05D004792 6.4e-103 378.6 449 48.3
Phvul.002G194500 Phaseolus vulgaris HOM05D004223 ORTHO05D004792 1.9e-102 377.1 449 47.9
Glyma.08G084000 Glycine max HOM05D004223 ORTHO05D004792 4.2e-102 375.9 443 47.6
SalBow8G4695 Salvia bowleyana HOM05D004223 ORTHO05D004792 5.4e-102 375.6 492 48.6
SalBow8G5598 Salvia bowleyana HOM05D004223 ORTHO05D004792 5.4e-102 375.6 492 48.6
QL08p044806 Quercus lobata HOM05D004223 ORTHO05D004792 1.3e-100 370.9 296 64.9
Lalb_Chr12g0208891 Lupinus albus HOM05D004223 ORTHO05D004792 1.8e-100 370.5 447 48.1
Lsat_1_v5_gn_7_32901 Lactuca sativa HOM05D004223 ORTHO05D004792 2.3e-100 370.2 425 51.1
TWI59G0075 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 3.0e-100 369.8 449 48.8
Potri.005G203600 Populus trichocarpa HOM05D004223 ORTHO05D004792 3.9e-100 369.4 437 50.1
Glyma.05G129300 Glycine max HOM05D004223 ORTHO05D004792 5.1e-100 369.0 443 46.7
Sc05g0006430 Simmondsia chinensis HOM05D004223 ORTHO05D004792 5.1e-100 369.0 449 49.7
ECA236G2733 Erigeron canadensis HOM05D004223 ORTHO05D004792 6.7e-100 368.6 392 55.4
EL10Ac8g19745 Beta vulgaris HOM05D004223 ORTHO05D004792 1.9e-99 367.1 460 48.3
Atru.chr6.2065 Acer truncatum HOM05D004223 ORTHO05D004792 5.3e-97 359.0 306 61.4
VMungo0251G1974 Vigna mungo HOM05D004223 ORTHO05D004792 3.4e-96 356.3 297 61.3
Medtr4g096650 Medicago truncatula HOM05D004223 ORTHO05D004792 1.0e-95 354.8 443 47.2
TWI53G0125 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 2.9e-95 353.2 279 66.3
FAN11G3669 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.1e-94 351.3 491 45.8
Lsat_1_v5_gn_7_7501 Lactuca sativa HOM05D004223 ORTHO05D004792 1.1e-94 351.3 421 51.1
MSTRG.7472 Avicennia marina HOM05D004223 ORTHO05D004792 4.2e-94 349.4 264 68.9
Psat7g090920 Pisum sativum HOM05D004223 ORTHO05D004792 9.3e-94 348.2 443 46.5
Duzib133G0675 Durio zibethinus HOM05D004223 ORTHO05D004792 1.6e-93 347.4 415 48.2
Thecc.01G170900 Theobroma cacao HOM05D004223 ORTHO05D004792 1.6e-93 347.4 432 47.5
Potri.002G058500 Populus trichocarpa HOM05D004223 ORTHO05D004792 2.1e-93 347.1 444 47.5
MELO3C019676.2 Cucumis melo HOM05D004223 ORTHO05D004792 2.7e-93 346.7 443 47.2
TPR.G4831 Trifolium pratense HOM05D004223 ORTHO05D004792 6.7e-92 342.0 444 46.6
ClCG02G018450 Citrullus lanatus HOM05D004223 ORTHO05D004792 1.5e-91 340.9 444 46.6
Oeu046871.2 Olea europaea HOM05D004223 ORTHO05D004792 1.5e-91 340.9 264 68.9
Gorai.001G092500 Gossypium raimondii HOM05D004223 ORTHO05D004792 6.9e-89 332.0 439 46.5
MD17G1137300 Malus domestica HOM05D004223 ORTHO05D004792 6.9e-89 332.0 445 44.5
Gohir.A07G080900 Gossypium hirsutum HOM05D004223 ORTHO05D004792 2.0e-88 330.5 441 46.3
TPR.G12676 Trifolium pratense HOM05D004223 ORTHO05D004792 4.5e-88 329.3 450 42.7
FvH4_6g38510 Fragaria vesca HOM05D004223 ORTHO05D004792 5.8e-88 328.9 448 44.4
CsaV3_6G013790 Cucumis sativus L. HOM05D004223 ORTHO05D004792 7.6e-88 328.6 443 45.1
RcHm_v2.0_Chr2g0151741 Rosa chinensis HOM05D004223 ORTHO05D004792 5.0e-87 325.9 434 46.1
Sed0004086 Sechium edule HOM05D004223 ORTHO05D004792 5.0e-87 325.9 437 46.0
Prupe.3G175100 Prunus persica HOM05D004223 ORTHO05D004792 1.9e-86 323.9 446 44.2
Sed0020532 Sechium edule HOM05D004223 ORTHO05D004792 1.2e-85 321.2 438 45.2
Ca_06273_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 2.1e-85 320.5 441 42.2
THA.LOC104803347 Tarenaya hassleriana HOM05D004223 ORTHO05D004792 1.8e-84 317.4 447 41.4
Zm00001eb153380 Zea mays HOM05D004223 ORTHO05D004792 3.9e-84 316.2 305 52.8
MELO3C002724.2 Cucumis melo HOM05D004223 ORTHO05D004792 2.5e-83 313.5 450 46.4
PGR042G1019 Punica granatum HOM05D004223 ORTHO05D004792 4.3e-83 312.8 441 44.0
Sed0009895 Sechium edule HOM05D004223 ORTHO05D004792 5.7e-83 312.4 450 46.2
Medtr5g091370 Medicago truncatula HOM05D004223 ORTHO05D004792 7.4e-83 312.0 444 41.0
Aa31LG1G24730 Aethionema arabicum HOM05D004223 ORTHO05D004792 9.7e-83 311.6 448 40.8
Os01g0751300 Oryza sativa ssp. japonica HOM05D004223 ORTHO05D004792 1.6e-82 310.8 442 42.3
AT3G59090 Arabidopsis thaliana HOM05D004223 ORTHO05D004792 2.8e-82 310.1 454 41.0
DCAR_003936 Daucus carota HOM05D004223 ORTHO05D004792 8.2e-82 308.5 257 65.4
unitig_92.g28154 Utricularia gibba HOM05D004223 ORTHO05D004792 8.2e-82 308.5 447 44.3
Actinidia39561 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.1e-81 308.1 316 57.3
AL5G40980 Arabidopsis lyrata HOM05D004223 ORTHO05D004792 1.4e-81 307.8 451 40.6
ATR0585G108 Amborella trichopoda HOM05D004223 ORTHO05D004792 2.0e-80 303.9 434 40.6
TAR624G0476 Trochodendron aralioides HOM05D004223 ORTHO05D004792 1.1e-78 298.1 340 50.9
AUR62030243 Chenopodium quinoa HOM05D004223 ORTHO05D004792 2.5e-78 297.0 303 55.1
Carub.0005s2585 Capsella rubella HOM05D004223 ORTHO05D004792 1.2e-77 294.7 449 39.9
SGA_v2.0_scaffold1G00153 Striga asiatica HOM05D004223 ORTHO05D004792 1.2e-77 294.7 304 57.6
CARHR169510 Cardamine hirsuta HOM05D004223 ORTHO05D004792 2.7e-77 293.5 451 39.2
BraA07t30092Z Brassica rapa HOM05D000230 ORTHO05D000176 7.9e-77 292.0 445 39.6
Gohir.D07G086500 Gossypium hirsutum HOM05D004223 ORTHO05D004792 7.9e-77 292.0 436 43.1
CiPaw.09G126400 Carya illinoinensis HOM05D004223 ORTHO05D004792 1.0e-76 291.6 336 51.2
Thhalv10006050m.g Eutrema salsugineum HOM05D004223 ORTHO05D004792 1.8e-76 290.8 451 39.0
BcaC07g40242 Brassica carinata HOM05D004223 ORTHO05D004792 2.3e-76 290.4 451 39.2
Duzib160G0026 Durio zibethinus HOM05D004223 ORTHO05D004792 3.0e-76 290.0 443 43.3
ClCG03G006980 Citrullus lanatus HOM05D004223 ORTHO05D004792 5.1e-76 289.3 518 40.9
Sp5g03900 Schrenkiella parvula HOM05D004223 ORTHO05D004792 4.3e-75 286.2 450 38.4
HPP92_021479 Vanilla planifolia HOM05D004223 ORTHO05D004792 1.3e-74 284.6 443 40.6
C06p25880 Brassica napus HOM05D000230 ORTHO05D000176 3.1e-73 280.0 445 38.2
BolC6t37750H Brassica oleracea HOM05D000230 ORTHO05D000176 3.1e-73 280.0 445 38.2
Sabra02G0047600 Salix brachista HOM05D004223 ORTHO05D004792 4.1e-73 279.6 259 61.0
BraA09t40587Z Brassica rapa HOM05D004223 ORTHO05D004792 2.0e-72 277.3 447 38.0
BcaC07g40241 Brassica carinata HOM05D004223 ORTHO05D004792 5.9e-72 275.8 308 49.0
C08p34260 Brassica napus HOM05D004223 ORTHO05D004792 5.9e-72 275.8 447 37.6
COL.COLO4_07169 Corchorus olitorius HOM05D000230 ORTHO05D000176 5.9e-72 275.8 280 54.6
CsaV3_1G032560 Cucumis sativus L. HOM05D004223 ORTHO05D004792 5.9e-72 275.8 388 47.7
A07p24480 Brassica napus HOM05D000230 ORTHO05D000176 1.3e-71 274.6 445 37.8
SGA_v2.0_scaffold333G49006 Striga asiatica HOM05D004223 ORTHO05D004792 6.5e-71 272.3 418 44.5
Psat2g016680 Pisum sativum HOM05D004223 ORTHO05D004792 2.7e-69 266.9 382 40.6
BolC8t51023H Brassica oleracea HOM05D004223 ORTHO05D004792 4.7e-69 266.2 303 47.9
Hund21517 Selenicereus undatus HOM05D004223 ORTHO05D004792 6.1e-69 265.8 238 60.1
A09p51500 Brassica napus HOM05D004223 ORTHO05D004792 1.0e-68 265.0 447 37.4
BcaC08g44958 Brassica carinata HOM05D000230 ORTHO05D000176 7.4e-67 258.8 440 37.5
vmacro10944 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 1.3e-66 258.1 427 40.5
CDE09G0669 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 2.8e-66 256.9 265 55.1
Eucgr.A02011 Eucalyptus grandis HOM05D004223 ORTHO05D004792 2.1e-61 240.7 261 52.9
SalBow7G0638 Salvia bowleyana HOM05D004223 ORTHO05D004792 2.1e-61 240.7 291 47.4
FAN16G0695 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.8e-60 237.7 255 56.1
Pp3c6_6380 Physcomitrium patens HOM05D004223 ORTHO05D004792 5.2e-60 236.1 260 49.2
FAN02G1578 Fragaria x ananassa HOM05D004223 ORTHO05D004792 6.7e-60 235.7 266 52.3
Pp3c5_22420 Physcomitrium patens HOM05D004223 ORTHO05D004792 1.5e-59 234.6 261 50.6
BcaB02g07485 Brassica carinata HOM05D004223 ORTHO05D004792 7.4e-59 232.3 489 32.7
COL.COLO4_06072 Corchorus olitorius HOM05D004223 ORTHO05D004792 1.3e-58 231.5 184 70.7
Ah.14g086580 Amaranthus hybridus HOM05D004223 ORTHO05D004792 3.7e-58 229.9 363 42.4
SMO296G0001 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 1.1e-57 228.4 274 47.4
Ca_18272_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 5.3e-57 226.1 186 62.9
Mapoly0056s0052 Marchantia polymorpha HOM05D004223 ORTHO05D004792 3.8e-55 219.9 274 45.3
Pp3c25_8320 Physcomitrium patens HOM05D004223 ORTHO05D004792 8.5e-55 218.8 261 47.5
Atru.chr10.1339 Acer truncatum HOM05D004223 ORTHO05D004792 1.7e-50 204.5 157 68.2
MBI10_g27412_MAGBIO Magnolia biondii HOM05D004223 ORTHO05D004792 1.0e-44 185.3 192 54.7
Actinidia22922 Actinidia chinensis HOM05D004223 ORTHO05D004792 7.0e-41 172.6 156 62.2
Duzib138G1261 Durio zibethinus HOM05D004223 ORTHO05D004792 1.6e-40 171.4 157 59.9
FAN14G4329 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.7e-39 167.9 267 41.9
MSTRG.16215 Avicennia marina HOM05D004223 ORTHO05D004792 8.6e-39 165.6 117 70.9
Atru.chr10.1338 Acer truncatum HOM05D004223 ORTHO05D004792 4.7e-37 159.8 228 39.5
Oeu040113.1 Olea europaea HOM05D004223 ORTHO05D004792 4.7e-37 159.8 158 60.8
Haze_05551 Corylus avellana HOM05D004223 ORTHO05D004792 2.3e-36 157.5 128 64.8
unitig_37.g12104 Utricularia gibba HOM05D004223 ORTHO05D004792 5.2e-36 156.4 137 59.9
unitig_37.g12105 Utricularia gibba HOM05D004223 ORTHO05D004792 4.4e-35 153.3 156 56.4
CSS0012222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 3.7e-34 150.2 109 71.6
Haze_13521 Corylus avellana HOM05D004223 ORTHO05D004792 2.0e-32 144.4 109 63.3
FAN21G3874 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.7e-31 141.4 262 38.9
SMO174G0155 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 2.9e-31 140.6 221 41.2
CSS0013327 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 2.3e-28 131.0 109 67.9
CDE02G0113 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 1.7e-26 124.8 121 53.7
Dinv05252 Davidia involucrata HOM05D004223 ORTHO05D004792 4.1e-25 120.2 72 80.6
PGSC0003DMG400012960 Solanum tuberosum HOM05D004223 ORTHO05D004792 4.1e-25 120.2 82 79.3
Oeu040112.1 Olea europaea HOM05D004223 ORTHO05D004792 2.0e-24 117.9 202 38.1
Dinv05253 Davidia involucrata HOM05D004223 ORTHO05D004792 2.7e-24 117.5 86 72.1
FAN05G0022 Fragaria x ananassa HOM05D004223 ORTHO05D004792 9.8e-19 99.0 223 36.3
Actinidia22925 Actinidia chinensis HOM05D004223 ORTHO05D004792 6.4e-18 96.3 58 75.9
PGSC0003DMG402008294 Solanum tuberosum HOM05D004223 ORTHO05D004792 3.2e-17 94.0 51 94.1
TPR.G14049 Trifolium pratense HOM05D004223 ORTHO05D004792 2.7e-16 90.9 98 51.0
QL05p059167 Quercus lobata HOM05D004223 ORTHO05D004792 1.7e-15 88.2 92 51.1
CSS0014222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 1.1e-12 79.0 75 65.3
vmacro10943 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 8.9e-12 75.9 45 80.0
Actinidia16726 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.6e-08 65.1 45 66.7
SMO174G0183 Selaginella moellendorffii HOM05D010282 ORTHO05D004792 7.3e-06 56.2 257 26.1


User provided reference genes

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