Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001655g0180 Nicotiana tabacum HOM05D015170 ORTHO05D000002 1.5e-161 572.8 281 100.0
Nitab4.5_0005591g0010 Nicotiana tabacum HOM05D015170 ORTHO05D000002 5.2e-50 202.2 164 62.2
Nitab4.5_0005138g0070 Nicotiana tabacum HOM05D015170 ORTHO05D000002 1.9e-47 193.7 175 58.9
Solyc09g020120.1 Solanum lycopersicum HOM05D015170 ORTHO05D000002 1.1e-28 131.3 99 63.6
Peaxi162Scf00006g00316 Petunia axillaris HOM05D015170 ORTHO05D000002 6.4e-24 115.5 72 72.2
MSTRG.15283 Avicennia marina HOM05D000045 ORTHO05D000067 9.3e-15 85.1 331 25.4
QL93p0049_0121 Quercus lobata HOM05D000045 ORTHO05D000067 1.3e-11 74.7 117 41.0
SGA_v2.0_scaffold95G28826 Striga asiatica HOM05D000990 ORTHO05D000810 4.8e-11 72.8 178 30.3
Nitab4.5_0001223g0100 Nicotiana tabacum HOM05D015170 ORTHO05D000002 2.4e-10 70.5 145 36.6
Prupe.2G147900 Prunus persica HOM05D000045 ORTHO05D000067 3.1e-10 70.1 157 33.1
Prupe.6G011300 Prunus persica HOM05D000045 ORTHO05D000067 3.1e-10 70.1 157 33.1
COL.COLO4_15687 Corchorus olitorius HOM05D000045 ORTHO05D010736 1.2e-09 68.2 118 36.4
PGR044G2175 Punica granatum HOM05D000045 ORTHO05D000067 4.9e-08 62.8 93 35.5
Atru.chr1.809 Acer truncatum HOM05D000045 ORTHO05D000067 1.1e-07 61.6 123 38.2
Os06g0166100 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.1e-07 61.6 117 33.3
TPR.G29744 Trifolium pratense HOM05D000045 ORTHO05D000067 1.4e-07 61.2 121 33.9
Nitab4.5_0000009g0050 Nicotiana tabacum HOM05D015170 ORTHO05D000002 1.9e-07 60.8 38 68.4
TWI74G1582 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.9e-07 60.8 124 33.1
FvH4_4g10602 Fragaria vesca HOM05D000045 ORTHO05D017020 7.1e-07 58.9 102 37.3
QL02p025436 Quercus lobata HOM05D000045 ORTHO05D010253 9.3e-07 58.5 73 42.5
Os12g0160900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 2.1e-06 57.4 143 25.9
Prupe.5G053800 Prunus persica HOM05D000045 ORTHO05D000067 3.5e-06 56.6 157 30.6
QL05p056997 Quercus lobata HOM05D000045 ORTHO05D000067 3.5e-06 56.6 73 42.5
QL06p052677 Quercus lobata HOM05D000045 ORTHO05D000067 4.6e-06 56.2 145 30.3
QL06p053907 Quercus lobata HOM05D000045 ORTHO05D011407 4.6e-06 56.2 102 37.3
TWI63G0536 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.9e-06 55.5 127 32.3


User provided reference genes

Program Settings