Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001655g0090 Nicotiana tabacum HOM05D005716 ORTHO05D007885 1.5e-95 352.8 172 100.0
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 4.0e-93 344.7 171 98.2
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 3.4e-92 341.7 171 97.7
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 9.8e-92 340.1 171 97.1
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 1.3e-91 339.7 171 97.7
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 1.3e-91 339.7 171 97.7
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 1.7e-91 339.3 171 95.3
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 2.9e-91 338.6 171 95.9
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 3.7e-91 338.2 171 95.9
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 3.7e-91 338.2 171 94.7
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 4.9e-91 337.8 171 94.7
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 6.4e-91 337.4 171 95.9
RcHm_v2.0_Chr5g0013741 Rosa chinensis HOM05D005716 ORTHO05D007885 1.1e-90 336.7 172 93.6
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 1.1e-90 336.7 171 94.7
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 2.4e-90 335.5 171 94.2
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.4e-90 335.5 171 94.2
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.4e-90 335.5 171 94.2
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 2.4e-90 335.5 170 94.1
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 2.4e-90 335.5 170 94.1
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 3.2e-90 335.1 171 94.2
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 3.2e-90 335.1 171 94.2
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 3.2e-90 335.1 171 94.7
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 4.1e-90 334.7 171 94.2
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 4.1e-90 334.7 171 94.2
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 4.1e-90 334.7 171 94.2
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 7.0e-90 334.0 171 94.2
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 9.2e-90 333.6 171 94.2
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 9.2e-90 333.6 171 94.2
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 9.2e-90 333.6 169 95.3
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 1.2e-89 333.2 171 94.2
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 1.2e-89 333.2 171 93.0
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 1.6e-89 332.8 171 91.8
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 2.0e-89 332.4 171 94.2
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.0e-89 332.4 171 94.2
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.0e-89 332.4 171 94.2
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 2.0e-89 332.4 171 94.2
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 2.0e-89 332.4 171 94.2
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 2.7e-89 332.0 171 94.2
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 2.7e-89 332.0 171 93.6
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 2.7e-89 332.0 182 90.7
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 2.7e-89 332.0 171 93.0
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 3.5e-89 331.6 171 93.6
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 4.6e-89 331.3 169 94.1
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 4.6e-89 331.3 171 94.2
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 4.6e-89 331.3 171 93.0
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 5.9e-89 330.9 171 93.0
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 5.9e-89 330.9 171 93.0
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 7.8e-89 330.5 171 93.0
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 7.8e-89 330.5 171 93.6
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 7.8e-89 330.5 169 93.5
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.0e-88 330.1 171 93.6
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.0e-88 330.1 171 93.6
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 1.0e-88 330.1 171 91.8
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 1.3e-88 329.7 171 92.4
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 1.3e-88 329.7 171 93.6
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 1.3e-88 329.7 171 92.4
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla HOM05D005716 ORTHO05D007885 1.7e-88 329.3 170 92.9
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 2.3e-88 328.9 171 93.6
Haze_05577 Corylus avellana HOM05D005716 ORTHO05D007885 2.3e-88 328.9 171 93.0
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 2.3e-88 328.9 168 94.0
Hund21524 Selenicereus undatus HOM05D005716 ORTHO05D007885 2.3e-88 328.9 182 89.6
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 3.0e-88 328.6 171 93.6
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 3.9e-88 328.2 171 91.8
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 3.9e-88 328.2 171 92.4
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 3.9e-88 328.2 171 92.4
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 3.9e-88 328.2 171 91.2
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 3.9e-88 328.2 171 91.2
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 3.9e-88 328.2 171 91.2
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 3.9e-88 328.2 171 91.2
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 3.9e-88 328.2 171 91.2
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 6.6e-88 327.4 171 93.6
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 1.1e-87 326.6 171 91.2
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 1.5e-87 326.2 171 91.2
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 1.9e-87 325.9 169 92.3
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 1.9e-87 325.9 171 91.2
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 1.9e-87 325.9 171 92.4
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 1.9e-87 325.9 171 90.6
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 2.5e-87 325.5 171 91.2
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 2.5e-87 325.5 167 94.6
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 3.3e-87 325.1 171 92.4
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 4.3e-87 324.7 171 92.4
PSO017G6742 Papaver somniferum HOM05D005716 ORTHO05D007885 4.3e-87 324.7 169 93.5
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 4.3e-87 324.7 171 92.4
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 4.3e-87 324.7 168 92.9
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 5.6e-87 324.3 171 90.6
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 7.3e-87 323.9 171 90.1
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 7.3e-87 323.9 171 91.8
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 7.3e-87 323.9 171 91.2
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 9.5e-87 323.6 171 91.2
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 1.6e-86 322.8 169 90.5
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 2.1e-86 322.4 169 92.3
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 2.8e-86 322.0 171 89.5
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 4.7e-86 321.2 171 90.1
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 4.7e-86 321.2 171 90.1
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 4.7e-86 321.2 169 91.7
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 4.7e-86 321.2 171 90.6
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 1.0e-85 320.1 171 89.5
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 1.0e-85 320.1 171 91.2
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 1.0e-85 320.1 169 89.9
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 9.2e-82 307.0 171 86.5
A04p06350 Brassica napus HOM05D005716 ORTHO05D007885 1.2e-81 306.6 177 85.3
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 1.7e-80 302.8 235 68.1
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 3.9e-80 301.6 169 85.8
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 5.0e-80 301.2 169 85.2
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 1.9e-79 299.3 161 88.8
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 4.3e-79 298.1 169 82.2
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 9.8e-76 287.0 144 96.5
BcaC02g09191 Brassica carinata HOM05D005716 ORTHO05D031863 6.0e-73 277.7 143 94.4
C04p39880 Brassica napus HOM05D005716 ORTHO05D007885 6.2e-70 267.7 147 89.1
BolC4t25559H Brassica oleracea HOM05D005716 ORTHO05D007885 3.1e-69 265.4 155 85.2
PRCOL_00002216 Prasinoderma coloniale HOM05D005716 ORTHO05D007885 3.1e-69 265.4 169 75.7
BraA04t16339Z Brassica rapa HOM05D005716 ORTHO05D007885 2.6e-68 262.3 155 84.5
RcHm_v2.0_Chr5g0013721 Rosa chinensis HOM05D005716 ORTHO05D007885 2.2e-67 259.2 156 82.1
FAN17G1884 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.9e-67 258.8 144 88.2
FAN23G0273 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.4e-66 255.8 144 85.4
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 4.1e-66 255.0 170 72.4
FAN25G2810 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.1e-65 252.7 144 86.1
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 1.9e-63 246.1 138 89.1
RcHm_v2.0_Chr5g0013731 Rosa chinensis HOM05D005716 ORTHO05D007885 1.6e-62 243.0 148 81.8
FAN02G1132 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.0e-60 236.1 181 68.5
Dinv30725 Davidia involucrata HOM05D005716 ORTHO05D007885 1.4e-53 213.4 141 76.6
FAN02G0019 Fragaria x ananassa HOM05D005716 ORTHO05D007885 7.9e-49 197.6 144 70.8
Haze_26810 Corylus avellana HOM05D005716 ORTHO05D164461 2.9e-43 179.1 161 54.7
AUR62030223 Chenopodium quinoa HOM05D005716 ORTHO05D044022 2.1e-41 172.9 167 58.1
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 1.3e-38 163.7 83 94.0
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 1.8e-32 143.3 69 98.6
FAN08G0336 Fragaria x ananassa HOM05D005716 ORTHO05D044022 3.0e-32 142.5 76 92.1
MSTRG.14769 Avicennia marina HOM05D005716 ORTHO05D007885 2.5e-31 139.4 73 89.0
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 8.2e-30 134.4 67 95.5
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea HOM05D005716 ORTHO05D087704 1.7e-27 126.7 109 61.5
CAN.G94.3 Capsicum annuum HOM05D005716 ORTHO05D115662 1.6e-25 120.2 93 65.6
VMungo1309G0118 Vigna mungo HOM05D005716 ORTHO05D437644 5.5e-18 95.1 52 84.6
A04p26400 Brassica napus HOM05D005716 ORTHO05D099386 2.0e-15 86.7 46 80.4


User provided reference genes

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