Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001653g0060 Nicotiana tabacum HOM05D007503 ORTHO05D009487 4.6e-29 130.6 67 100.0
Nitab4.5_0011656g0020 Nicotiana tabacum HOM05D007503 ORTHO05D009487 1.4e-25 119.0 67 89.6
GSVIVG01010020001 Vitis vinifera HOM05D007503 ORTHO05D009487 9.3e-22 106.3 60 85.0
Cc09_g03530 Coffea canephora HOM05D007503 ORTHO05D009487 1.2e-21 105.9 60 86.7
Hma1.2p1_0123F.1_g057900 Hydrangea macrophylla HOM05D007503 ORTHO05D009487 1.0e-20 102.8 65 78.5
Rhsim01G0105600 Rhododendron simsii HOM05D007503 ORTHO05D009487 1.0e-20 102.8 65 76.9
Dinv06977 Davidia involucrata HOM05D007503 ORTHO05D009487 1.8e-20 102.1 64 76.6
vmacro20740 Vaccinium macrocarpon HOM05D007503 ORTHO05D009487 3.0e-20 101.3 65 78.5
HanXRQChr02g0039651 Helianthus annuus HOM05D007503 ORTHO05D009487 3.9e-20 100.9 63 76.2
Actinidia06811 Actinidia chinensis HOM05D007503 ORTHO05D009487 1.9e-19 98.6 63 76.2
Migut.F01879 Erythranthe guttata HOM05D007503 ORTHO05D009487 4.3e-19 97.4 56 83.9
SalBow6G4878 Salvia bowleyana HOM05D007503 ORTHO05D009487 5.6e-19 97.1 62 75.8
Peaxi162Scf00253g00725 Petunia axillaris HOM05D007503 ORTHO05D009487 6.2e-18 93.6 72 70.8
TWI56G0335 Tripterygium wilfordii HOM05D007503 ORTHO05D009487 8.1e-18 93.2 64 68.8
CAN.G326.18 Capsicum annuum HOM05D007503 ORTHO05D009487 1.4e-17 92.4 75 68.0
ECA232G1405 Erigeron canadensis HOM05D007503 ORTHO05D009487 1.8e-17 92.0 61 70.5
Nitab4.5_0002233g0020 Nicotiana tabacum HOM05D007503 ORTHO05D009487 2.4e-17 91.7 62 74.2
Haze_14049 Corylus avellana HOM05D007503 ORTHO05D009487 3.1e-17 91.3 60 75.0
Haze_14060 Corylus avellana HOM05D007503 ORTHO05D009487 3.1e-17 91.3 60 75.0
Lalb_Chr20g0117211 Lupinus albus HOM05D007503 ORTHO05D009487 3.1e-17 91.3 69 69.6
PSO729G0165 Papaver somniferum HOM05D007503 ORTHO05D009487 3.1e-17 91.3 62 72.6
unitig_0.g938 Utricularia gibba HOM05D001953 ORTHO05D001904 3.1e-17 91.3 59 74.6
DCAR_007994 Daucus carota HOM05D007503 ORTHO05D009487 6.9e-17 90.1 61 72.1
FAN26G0784 Fragaria x ananassa HOM05D000757 ORTHO05D000622 9.0e-17 89.7 69 71.0
DCAR_023852 Daucus carota HOM05D007503 ORTHO05D009487 1.2e-16 89.4 61 70.5
Solyc03g058340.3 Solanum lycopersicum HOM05D007503 ORTHO05D009487 2.6e-16 88.2 75 65.3
Sopen03g015570 Solanum pennellii HOM05D007503 ORTHO05D009487 2.6e-16 88.2 75 65.3
CiPaw.03G009100 Carya illinoinensis HOM05D007503 ORTHO05D009487 3.4e-16 87.8 53 81.1
FvH4_1g27230 Fragaria vesca HOM05D007503 ORTHO05D009487 3.4e-16 87.8 72 66.7
FAN19G2707 Fragaria x ananassa HOM05D007503 ORTHO05D009487 3.4e-16 87.8 72 66.7
FAN23G0073 Fragaria x ananassa HOM05D007503 ORTHO05D009487 3.4e-16 87.8 72 66.7
Manes.01G240301 Manihot esculenta HOM05D007503 ORTHO05D009487 4.5e-16 87.4 61 68.9
RcHm_v2.0_Chr3g0487701 Rosa chinensis HOM05D007503 ORTHO05D009487 7.6e-16 86.7 71 66.2
Glyma.18G047300 Glycine max HOM05D007503 ORTHO05D009487 9.9e-16 86.3 68 64.7
MD17G1272500 Malus domestica HOM05D007503 ORTHO05D009487 9.9e-16 86.3 65 70.8
QL02p056384 Quercus lobata HOM05D007503 ORTHO05D009487 9.9e-16 86.3 62 74.2
Glyma.11G203700 Glycine max HOM05D007503 ORTHO05D009487 1.3e-15 85.9 68 64.7
Lj6g0027028 Lotus japonicus HOM05D007503 ORTHO05D009487 1.3e-15 85.9 68 64.7
Potri.014G105250 Populus trichocarpa HOM05D007503 ORTHO05D009487 1.3e-15 85.9 58 70.7
Prupe.3G011500 Prunus persica HOM05D007503 ORTHO05D009487 1.3e-15 85.9 66 66.7
Gohir.A11G170200 Gossypium hirsutum HOM05D007503 ORTHO05D009487 1.7e-15 85.5 56 69.6
Gohir.D11G177200 Gossypium hirsutum HOM05D007503 ORTHO05D009487 1.7e-15 85.5 56 69.6
Gorai.007G189300 Gossypium raimondii HOM05D007503 ORTHO05D009487 1.7e-15 85.5 56 69.6
Sc09g0004610 Simmondsia chinensis HOM05D007503 ORTHO05D009487 1.7e-15 85.5 58 72.4
Phvul.006G084000 Phaseolus vulgaris HOM05D007503 ORTHO05D009487 2.9e-15 84.7 58 70.7
Pp3c11_25150 Physcomitrium patens HOM05D007503 ORTHO05D009487 3.8e-15 84.3 56 75.0
THA.LOC104815587 Tarenaya hassleriana HOM05D007503 ORTHO05D009487 3.8e-15 84.3 63 68.3
Nn1g09784 Nelumbo nucifera HOM05D007503 ORTHO05D009487 4.9e-15 84.0 58 70.7
Thecc.09G340100 Theobroma cacao HOM05D007503 ORTHO05D009487 4.9e-15 84.0 56 75.0
CANSAT80G2883 Cannabis sativa HOM05D007503 ORTHO05D009487 6.4e-15 83.6 65 67.7
Eucgr.I00239 Eucalyptus grandis HOM05D007503 ORTHO05D009487 8.4e-15 83.2 66 68.2
Hund06856 Selenicereus undatus HOM05D007503 ORTHO05D009487 8.4e-15 83.2 58 72.4
MD09G1282700 Malus domestica HOM05D007503 ORTHO05D009487 1.1e-14 82.8 65 69.2
THA.LOC104822606 Tarenaya hassleriana HOM05D007503 ORTHO05D009487 1.4e-14 82.4 61 67.2
Duzib211G0566 Durio zibethinus HOM05D007503 ORTHO05D009487 1.9e-14 82.0 56 71.4
AT3G14430 Arabidopsis thaliana HOM05D007503 ORTHO05D009487 3.2e-14 81.3 58 72.4
A01p39280 Brassica napus HOM05D007503 ORTHO05D009487 3.2e-14 81.3 58 70.7
CARHR089340 Cardamine hirsuta HOM05D007503 ORTHO05D009487 3.2e-14 81.3 58 72.4
Medtr3g063970 Medicago truncatula HOM05D007503 ORTHO05D009487 3.2e-14 81.3 70 61.4
PGR119G1426 Punica granatum HOM05D007503 ORTHO05D009487 4.2e-14 80.9 59 67.8
BcaC09g48410 Brassica carinata HOM05D007503 ORTHO05D009487 5.5e-14 80.5 58 69.0
C01p50080 Brassica napus HOM05D007503 ORTHO05D009487 5.5e-14 80.5 58 69.0
BolC1t04962H Brassica oleracea HOM05D007503 ORTHO05D009487 5.5e-14 80.5 58 69.0
BraA01t03971Z Brassica rapa HOM05D007503 ORTHO05D009487 7.1e-14 80.1 58 69.0
COL.COLO4_13441 Corchorus olitorius HOM05D007503 ORTHO05D009487 7.1e-14 80.1 56 69.6
CDE05G2177 Ceratophyllum demersum HOM05D007503 ORTHO05D009487 9.3e-14 79.7 58 67.2
Aqoxy5G03063 Aquilegia oxysepala HOM05D007503 ORTHO05D009487 1.2e-13 79.3 52 75.0
Carub.0003s1415 Capsella rubella HOM05D007503 ORTHO05D009487 1.2e-13 79.3 58 69.0
AL3G26810 Arabidopsis lyrata HOM05D007503 ORTHO05D009487 2.1e-13 78.6 58 70.7
BcaB06g25385 Brassica carinata HOM05D007503 ORTHO05D009487 3.5e-13 77.8 58 67.2
BolC5t33967H Brassica oleracea HOM05D007503 ORTHO05D009487 3.5e-13 77.8 58 67.2
Thhalv10021919m.g Eutrema salsugineum HOM05D007503 ORTHO05D009487 3.5e-13 77.8 58 69.0
Sabra14G0077600 Salix brachista HOM05D007503 ORTHO05D009487 3.5e-13 77.8 58 65.5
A05p34950 Brassica napus HOM05D007503 ORTHO05D009487 6.0e-13 77.0 58 67.2
C05p52900 Brassica napus HOM05D007503 ORTHO05D009487 6.0e-13 77.0 58 67.2
BraA05t22309Z Brassica rapa HOM05D007503 ORTHO05D009487 6.0e-13 77.0 58 67.2
Ciclev10013261m.g Citrus clementina HOM05D007503 ORTHO05D009487 6.0e-13 77.0 63 61.9
Sp3g12730 Schrenkiella parvula HOM05D007503 ORTHO05D009487 6.0e-13 77.0 58 65.5
BcaC05g29084 Brassica carinata HOM05D007503 ORTHO05D009487 7.9e-13 76.6 58 67.2
Aa31LG8G1690 Aethionema arabicum HOM05D007503 ORTHO05D009487 2.3e-12 75.1 58 63.8
Os08g0528601 Oryza sativa ssp. japonica HOM05D007503 ORTHO05D009487 5.1e-12 73.9 51 72.5
Zm00001eb036330 Zea mays HOM05D007503 ORTHO05D009487 5.1e-12 73.9 56 64.3
Zm00001eb175060 Zea mays HOM05D007503 ORTHO05D009487 1.1e-11 72.8 65 56.9
Pp3c7_7140 Physcomitrium patens HOM05D007503 ORTHO05D009487 2.5e-11 71.6 56 62.5
MELO3C025073.2 Cucumis melo HOM05D007503 ORTHO05D009487 3.3e-11 71.2 52 63.5
CsaV3_5G020250 Cucumis sativus L. HOM05D007503 ORTHO05D009487 3.3e-11 71.2 52 63.5
ClCG01G008330 Citrullus lanatus HOM05D007503 ORTHO05D009487 4.3e-11 70.9 52 63.5
Sabra02G0134700 Salix brachista HOM05D007503 ORTHO05D009487 7.4e-11 70.1 58 56.9
Sed0018329 Sechium edule HOM05D007503 ORTHO05D009487 7.4e-11 70.1 52 65.4
Lsat_1_v5_gn_9_48861 Lactuca sativa HOM05D007503 ORTHO05D009487 1.8e-09 65.5 46 71.7
Mapoly0109s0063 Marchantia polymorpha HOM05D007503 ORTHO05D009487 5.8e-08 60.5 42 73.8
CSS0042421 Camellia sinensis var. sinensis HOM05D007503 ORTHO05D009487 7.6e-08 60.1 42 73.8
Cpa.g.c46349 Carica papaya HOM05D007503 ORTHO05D009487 7.6e-08 60.1 46 58.7
Cpa.g.sc44.91 Carica papaya HOM05D007503 ORTHO05D009487 7.6e-08 60.1 46 58.7
PGSC0003DMG400000976 Solanum tuberosum HOM05D007503 ORTHO05D009487 7.6e-08 60.1 71 50.7
HanXRQChr14g0445891 Helianthus annuus HOM05D007503 ORTHO05D009487 2.2e-07 58.5 44 68.2
Aa31LG10G1620 Aethionema arabicum HOM05D007503 ORTHO05D009487 2.9e-07 58.2 53 54.7
TAR392G0002 Trochodendron aralioides HOM05D007503 ORTHO05D009487 1.9e-06 55.5 37 78.4
HPP92_021450 Vanilla planifolia HOM05D007503 ORTHO05D009487 1.9e-06 55.5 42 69.0
arahy.Tifrunner.gnm1.ann1.CKCH2H Arachis hypogaea HOM05D007503 ORTHO05D009487 2.5e-06 55.1 47 61.7
arahy.Tifrunner.gnm1.ann1.17W1X2 Arachis hypogaea HOM05D007503 ORTHO05D009487 4.2e-06 54.3 47 61.7
Pp3c16_8300 Physcomitrium patens HOM05D005009 ORTHO05D006203 7.1e-06 53.5 50 58.0


User provided reference genes

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