Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001650g0170 Nicotiana tabacum HOM05D007545 ORTHO05D009579 5.0e-141 505.8 635 100.0
Nitab4.5_0001088g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 4.7e-99 366.3 213 89.7
Nitab4.5_0010123g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 4.5e-65 253.4 129 96.9
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 3.2e-63 247.3 210 63.8
Nitab4.5_0001650g0140 Nicotiana tabacum HOM05D007545 ORTHO05D009579 4.6e-62 243.4 138 89.9
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 6.0e-62 243.0 214 58.4
Migut.K00924 Erythranthe guttata HOM05D007545 ORTHO05D009579 6.0e-62 243.0 214 60.7
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 1.3e-61 241.9 232 54.3
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.3e-61 241.9 129 92.2
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 1.1e-60 238.8 265 50.9
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 1.5e-60 238.4 212 58.0
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 9.6e-60 235.7 232 53.0
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 1.2e-57 228.8 211 56.9
CAN.G222.58 Capsicum annuum HOM05D007545 ORTHO05D009579 2.0e-57 228.0 138 79.7
Peaxi162Scf00562g00002 Petunia axillaris HOM05D007545 ORTHO05D009579 2.6e-57 227.6 140 80.0
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 2.9e-56 224.2 259 48.6
Haze_14281 Corylus avellana HOM05D007545 ORTHO05D009579 6.4e-56 223.0 257 54.1
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 1.1e-55 222.2 234 51.3
Solyc11g011410.3 Solanum lycopersicum HOM05D007545 ORTHO05D009579 1.1e-55 222.2 129 83.7
Cfa007791 Carpinus fangiana HOM05D007545 ORTHO05D009579 1.9e-55 221.5 254 51.2
PGSC0003DMG400013237 Solanum tuberosum HOM05D007545 ORTHO05D009579 2.5e-55 221.1 129 83.7
Sopen11g006210 Solanum pennellii HOM05D007545 ORTHO05D009579 9.3e-55 219.2 129 82.9
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 1.0e-53 215.7 248 49.2
CiPaw.03G073600 Carya illinoinensis HOM05D007545 ORTHO05D009579 1.1e-52 212.2 217 54.8
MELO3C032020.2 Cucumis melo HOM05D007545 ORTHO05D009579 4.8e-51 206.8 232 48.7
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 2.4e-50 204.5 232 48.3
Sed0004069 Sechium edule HOM05D007545 ORTHO05D009579 2.0e-49 201.4 222 49.1
MD17G1268500 Malus domestica HOM05D007545 ORTHO05D009579 3.4e-49 200.7 205 53.7
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 6.5e-48 196.4 232 46.1
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 1.1e-47 195.7 217 49.8
Ciclev10011347m.g Citrus clementina HOM05D007545 ORTHO05D009579 1.4e-47 195.3 232 47.4
Lsat_1_v5_gn_2_68461 Lactuca sativa HOM05D007545 ORTHO05D009579 9.3e-47 192.6 239 46.4
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 2.1e-46 191.4 232 45.7
GSVIVG01030674001 Vitis vinifera HOM05D007545 ORTHO05D009579 6.0e-46 189.9 225 49.3
Hma1.2p1_0158F.1_g070060 Hydrangea macrophylla HOM05D007545 ORTHO05D009579 3.9e-45 187.2 214 50.0
Sc14g0006910 Simmondsia chinensis HOM05D007545 ORTHO05D009579 8.7e-45 186.0 214 46.3
Rhsim10G0178600 Rhododendron simsii HOM05D007545 ORTHO05D009579 1.1e-44 185.7 219 48.4
Hund13089 Selenicereus undatus HOM05D007545 ORTHO05D009579 1.1e-44 185.7 232 44.0
HanXRQChr14g0457331 Helianthus annuus HOM05D007545 ORTHO05D009579 2.8e-43 181.0 218 47.7
Potri.017G131400 Populus trichocarpa HOM05D007545 ORTHO05D009579 1.8e-42 178.3 234 44.4
PGR004G2599 Punica granatum HOM05D007545 ORTHO05D009579 1.8e-42 178.3 249 44.2
QL08p020033 Quercus lobata HOM05D007545 ORTHO05D009579 1.8e-42 178.3 232 47.4
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 3.1e-42 177.6 240 41.7
C05p07760 Brassica napus HOM05D007545 ORTHO05D009579 5.3e-42 176.8 240 42.5
BolC5t29527H Brassica oleracea HOM05D007545 ORTHO05D009579 5.3e-42 176.8 240 42.5
CANSAT64G1149 Cannabis sativa HOM05D007545 ORTHO05D009579 6.9e-42 176.4 220 46.4
Aqoxy3G04069 Aquilegia oxysepala HOM05D007545 ORTHO05D009579 2.0e-41 174.9 205 47.3
Manes.01G119900 Manihot esculenta HOM05D007545 ORTHO05D009579 2.0e-41 174.9 232 43.5
Sp1g08270 Schrenkiella parvula HOM05D001024 ORTHO05D009579 4.5e-41 173.7 265 40.0
Atru.chr1.1983 Acer truncatum HOM05D007545 ORTHO05D009579 5.9e-41 173.3 243 41.6
Phvul.008G237700 Phaseolus vulgaris HOM05D007545 ORTHO05D009579 7.7e-41 172.9 231 43.7
FAN26G0753 Fragaria x ananassa HOM05D007545 ORTHO05D009579 1.7e-40 171.8 214 45.8
BraA06t23847Z Brassica rapa HOM05D007545 ORTHO05D009579 2.2e-40 171.4 233 41.6
THA.LOC104805633 Tarenaya hassleriana HOM05D007545 ORTHO05D009579 2.2e-40 171.4 242 40.9
Sed0020460 Sechium edule HOM05D007545 ORTHO05D009579 3.8e-40 170.6 222 45.5
ECA238G0700 Erigeron canadensis HOM05D007545 ORTHO05D009579 1.9e-39 168.3 232 44.8
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 1.9e-39 168.3 214 46.7
AL1G20230 Arabidopsis lyrata HOM05D007545 ORTHO05D009579 3.2e-39 167.5 240 39.6
A06p06360 Brassica napus HOM05D007545 ORTHO05D009579 4.2e-39 167.2 233 41.6
FAN19G0914 Fragaria x ananassa HOM05D007545 ORTHO05D009579 5.5e-39 166.8 217 44.7
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 1.6e-38 165.2 220 41.4
Aa31LG1G5330 Aethionema arabicum HOM05D007545 ORTHO05D009579 2.7e-38 164.5 240 40.8
CARHR009650 Cardamine hirsuta HOM05D007545 ORTHO05D009579 2.7e-38 164.5 240 40.0
VMungo0647G0528 Vigna mungo HOM05D007545 ORTHO05D009579 4.6e-38 163.7 229 40.6
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 6.1e-38 163.3 222 42.8
Cpa.g.sc340.2 Carica papaya HOM05D007545 ORTHO05D009579 7.9e-38 162.9 232 42.7
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 1.8e-37 161.8 248 41.9
Eucgr.F02875 Eucalyptus grandis HOM05D007545 ORTHO05D009579 3.0e-37 161.0 216 44.0
Glyma.02G243500 Glycine max HOM05D007545 ORTHO05D009579 3.0e-37 161.0 222 42.8
AT1G09680 Arabidopsis thaliana HOM05D007545 ORTHO05D009579 5.1e-37 160.2 225 40.9
Carub.0001s0902 Capsella rubella HOM05D007545 ORTHO05D009579 2.5e-36 157.9 237 39.2
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 1.7e-35 155.2 138 56.5
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 1.7e-35 155.2 221 42.1
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 1.4e-31 142.1 141 50.4
ClCG05G010640 Citrullus lanatus HOM05D007545 ORTHO05D009579 3.9e-29 134.0 138 47.8
Gohir.A08G039000 Gossypium hirsutum HOM05D007545 ORTHO05D009579 2.6e-28 131.3 120 52.5
Nn3g18372 Nelumbo nucifera HOM05D007545 ORTHO05D009579 4.8e-27 127.1 128 48.4
Lj4C259T9 Lonicera japonica HOM05D007545 ORTHO05D009579 1.4e-26 125.6 129 48.1
CsaV3_3G017850 Cucumis sativus L. HOM05D007545 ORTHO05D009579 2.2e-24 118.2 136 50.7
Sabra17G0109500 Salix brachista HOM05D007545 ORTHO05D009579 6.5e-24 116.7 138 42.8
QL05p016537 Quercus lobata HOM05D007545 ORTHO05D009579 1.1e-23 115.9 168 41.7
COL.COLO4_13423 Corchorus olitorius HOM05D007545 ORTHO05D009579 1.0e-21 109.4 83 55.4
Psat2g047200 Pisum sativum HOM05D007545 ORTHO05D009579 1.5e-20 105.5 140 38.6
ATR0753G016 Amborella trichopoda HOM05D007545 ORTHO05D009579 8.2e-19 99.8 132 37.9
SEGI_34198 Sequoiadendron giganteum HOM05D007545 ORTHO05D009579 5.3e-18 97.1 208 32.2
Ca_05835_v3 Cicer arietinum L. HOM05D007545 ORTHO05D009579 1.0e-16 92.8 116 38.8
Nitab4.5_0005124g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 3.6e-14 84.3 44 86.4
FvH4_1g30171 Fragaria vesca HOM05D007545 ORTHO05D009579 4.0e-13 80.9 119 44.5
Gorai.007G220500 Gossypium raimondii HOM05D007545 ORTHO05D009579 1.2e-12 79.3 140 35.0
Zm00001eb080530 Zea mays HOM05D007545 ORTHO05D009579 1.3e-11 75.9 239 27.2
CANSAT21G0576 Cannabis sativa HOM05D007496 ORTHO05D009479 3.1e-10 71.2 167 24.6
Cc10_g12620 Coffea canephora HOM05D007496 ORTHO05D009479 4.5e-09 67.4 164 22.6
HPP92_026949 Vanilla planifolia HOM05D007545 ORTHO05D009579 4.5e-09 67.4 88 37.5
Nitab4.5_0009075g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 5.9e-09 67.0 33 93.9
BcaC06g34078 Brassica carinata HOM05D007496 ORTHO05D009479 2.9e-08 64.7 162 25.3
BolC7t43809H Brassica oleracea HOM05D007496 ORTHO05D009479 2.9e-08 64.7 162 25.3
Sp2g13565 Schrenkiella parvula HOM05D007496 ORTHO05D009479 3.8e-08 64.3 162 23.5
C07p33010 Brassica napus HOM05D007496 ORTHO05D009479 8.5e-08 63.2 162 24.7
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 1.1e-07 62.8 185 27.6
Manes.10G064000 Manihot esculenta HOM05D007496 ORTHO05D009479 1.5e-07 62.4 167 21.6
A06p43780 Brassica napus HOM05D007496 ORTHO05D009479 3.2e-07 61.2 162 24.1
BraA06t27256Z Brassica rapa HOM05D007496 ORTHO05D009479 4.2e-07 60.8 161 24.2
Sp3g28900 Schrenkiella parvula HOM05D007083 ORTHO05D008801 1.2e-06 59.3 214 24.8
Carub.0005s0122 Capsella rubella HOM05D007496 ORTHO05D009479 2.7e-06 58.2 161 26.1
THA.LOC104819595 Tarenaya hassleriana HOM05D007083 ORTHO05D008801 2.7e-06 58.2 157 23.6
AL5G11430 Arabidopsis lyrata HOM05D007496 ORTHO05D009479 3.6e-06 57.8 158 24.7
Thhalv10003688m.g Eutrema salsugineum HOM05D007496 ORTHO05D009479 3.6e-06 57.8 167 20.4
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 8.0e-06 56.6 150 27.3
MSTRG.8165 Avicennia marina HOM05D005287 ORTHO05D006893 8.0e-06 56.6 219 27.4
RcHm_v2.0_Chr2g0092171 Rosa chinensis HOM05D003210 ORTHO05D000001 8.0e-06 56.6 197 26.9


User provided reference genes

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