Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001650g0140 Nicotiana tabacum HOM05D007545 ORTHO05D009579 9.6e-90 335.1 524 100.0
Nitab4.5_0010123g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 4.8e-65 253.1 140 92.1
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 4.5e-63 246.5 553 64.9
Nitab4.5_0001650g0170 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.9e-62 243.8 138 89.9
Nitab4.5_0001088g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 6.7e-59 232.6 140 85.7
Peaxi162Scf00562g00002 Petunia axillaris HOM05D007545 ORTHO05D009579 4.8e-57 226.5 153 75.8
CAN.G222.58 Capsicum annuum HOM05D007545 ORTHO05D009579 1.4e-56 224.9 149 75.8
PGSC0003DMG400013237 Solanum tuberosum HOM05D007545 ORTHO05D009579 4.1e-56 223.4 142 79.6
Solyc11g011410.3 Solanum lycopersicum HOM05D007545 ORTHO05D009579 7.7e-55 219.2 139 79.9
Sopen11g006210 Solanum pennellii HOM05D007545 ORTHO05D009579 2.0e-50 204.5 134 78.4
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 3.5e-31 140.6 141 51.8
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 1.7e-30 138.3 148 47.3
Ciclev10011347m.g Citrus clementina HOM05D007545 ORTHO05D009579 3.8e-30 137.1 150 48.0
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 1.5e-29 135.2 148 48.6
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 3.3e-29 134.0 141 53.9
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 5.5e-29 133.3 141 47.5
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 5.5e-29 133.3 141 47.5
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 5.5e-29 133.3 144 46.5
Migut.K00924 Erythranthe guttata HOM05D007545 ORTHO05D009579 9.5e-29 132.5 141 53.9
BraA06t23847Z Brassica rapa HOM05D007545 ORTHO05D009579 3.0e-27 127.5 151 44.4
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 4.0e-27 127.1 151 45.0
Sc14g0006910 Simmondsia chinensis HOM05D007545 ORTHO05D009579 5.2e-27 126.7 145 46.2
A06p06360 Brassica napus HOM05D007545 ORTHO05D009579 1.5e-26 125.2 151 44.4
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 2.6e-26 124.4 135 50.4
Aa31LG1G5330 Aethionema arabicum HOM05D007545 ORTHO05D009579 3.4e-26 124.0 150 44.0
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 3.4e-26 124.0 151 43.7
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 3.4e-26 124.0 135 47.4
Sp1g08270 Schrenkiella parvula HOM05D001024 ORTHO05D009579 5.7e-26 123.2 150 44.0
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 7.5e-26 122.9 143 44.8
CARHR009650 Cardamine hirsuta HOM05D007545 ORTHO05D009579 2.2e-25 121.3 151 42.4
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 4.9e-25 120.2 145 43.4
C05p07760 Brassica napus HOM05D007545 ORTHO05D009579 6.3e-25 119.8 148 42.6
BolC5t29527H Brassica oleracea HOM05D007545 ORTHO05D009579 6.3e-25 119.8 148 42.6
COL.COLO4_13423 Corchorus olitorius HOM05D007545 ORTHO05D009579 8.3e-25 119.4 96 54.2
THA.LOC104805633 Tarenaya hassleriana HOM05D007545 ORTHO05D009579 1.1e-24 119.0 151 41.7
AL1G20230 Arabidopsis lyrata HOM05D007545 ORTHO05D009579 1.4e-24 118.6 151 41.1
Lj4C259T9 Lonicera japonica HOM05D007545 ORTHO05D009579 1.4e-24 118.6 83 61.4
ClCG05G010640 Citrullus lanatus HOM05D007545 ORTHO05D009579 2.4e-24 117.9 144 42.4
Atru.chr1.1983 Acer truncatum HOM05D007545 ORTHO05D009579 3.1e-24 117.5 149 40.3
Sabra17G0109500 Salix brachista HOM05D007545 ORTHO05D009579 3.1e-24 117.5 141 42.6
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 5.4e-24 116.7 145 42.8
Haze_14281 Corylus avellana HOM05D007545 ORTHO05D009579 7.0e-24 116.3 129 48.1
MELO3C032020.2 Cucumis melo HOM05D007545 ORTHO05D009579 9.2e-24 115.9 141 43.3
AT1G09680 Arabidopsis thaliana HOM05D007545 ORTHO05D009579 1.2e-23 115.5 150 41.3
Potri.017G131400 Populus trichocarpa HOM05D007545 ORTHO05D009579 1.6e-23 115.2 89 55.1
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 3.5e-23 114.0 150 43.3
Cpa.g.sc340.2 Carica papaya HOM05D007545 ORTHO05D009579 4.5e-23 113.6 101 54.5
Sed0004069 Sechium edule HOM05D007545 ORTHO05D009579 4.5e-23 113.6 141 41.8
CiPaw.03G073600 Carya illinoinensis HOM05D007545 ORTHO05D009579 7.8e-23 112.8 126 50.0
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 1.3e-22 112.1 126 48.4
Gohir.A08G039000 Gossypium hirsutum HOM05D007545 ORTHO05D009579 1.7e-22 111.7 150 41.3
FAN26G0753 Fragaria x ananassa HOM05D007545 ORTHO05D009579 2.3e-22 111.3 150 41.3
MD17G1268500 Malus domestica HOM05D007545 ORTHO05D009579 2.9e-22 110.9 126 46.8
Nn3g18372 Nelumbo nucifera HOM05D007545 ORTHO05D009579 2.9e-22 110.9 114 47.4
Cfa007791 Carpinus fangiana HOM05D007545 ORTHO05D009579 3.8e-22 110.5 126 46.0
FAN19G0914 Fragaria x ananassa HOM05D007545 ORTHO05D009579 6.6e-22 109.8 150 40.7
Rhsim10G0178600 Rhododendron simsii HOM05D007545 ORTHO05D009579 6.6e-22 109.8 150 39.3
Hma1.2p1_0158F.1_g070060 Hydrangea macrophylla HOM05D007545 ORTHO05D009579 8.6e-22 109.4 82 61.0
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 1.5e-21 108.6 148 39.2
Nitab4.5_0005124g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.5e-21 108.6 57 91.2
Manes.01G119900 Manihot esculenta HOM05D007545 ORTHO05D009579 1.9e-21 108.2 95 50.5
Psat2g047200 Pisum sativum HOM05D007545 ORTHO05D009579 2.5e-21 107.8 153 41.2
Carub.0001s0902 Capsella rubella HOM05D007545 ORTHO05D009579 5.6e-21 106.7 145 40.0
Hund13089 Selenicereus undatus HOM05D007545 ORTHO05D009579 5.6e-21 106.7 138 41.3
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 1.2e-20 105.5 141 41.1
Phvul.008G237700 Phaseolus vulgaris HOM05D007545 ORTHO05D009579 2.1e-20 104.8 150 40.7
QL08p020033 Quercus lobata HOM05D007545 ORTHO05D009579 2.8e-20 104.4 87 56.3
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 3.6e-20 104.0 154 40.3
VMungo0647G0528 Vigna mungo HOM05D007545 ORTHO05D009579 4.7e-20 103.6 154 38.3
Eucgr.F02875 Eucalyptus grandis HOM05D007545 ORTHO05D009579 6.1e-20 103.2 148 40.5
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 1.0e-19 102.4 141 41.1
Ca_05835_v3 Cicer arietinum L. HOM05D007545 ORTHO05D009579 2.3e-19 101.3 108 46.3
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 2.3e-19 101.3 150 39.3
Glyma.02G243500 Glycine max HOM05D007545 ORTHO05D009579 4.0e-19 100.5 154 39.0
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 4.0e-19 100.5 153 38.6
PGR004G2599 Punica granatum HOM05D007545 ORTHO05D009579 5.2e-19 100.1 126 42.1
QL05p016537 Quercus lobata HOM05D007545 ORTHO05D009579 5.2e-19 100.1 87 54.0
GSVIVG01030674001 Vitis vinifera HOM05D007545 ORTHO05D009579 2.0e-18 98.2 129 42.6
HanXRQChr14g0457331 Helianthus annuus HOM05D007545 ORTHO05D009579 6.4e-17 93.2 148 39.9
ATR0753G016 Amborella trichopoda HOM05D007545 ORTHO05D009579 1.1e-16 92.4 94 45.7
Lsat_1_v5_gn_2_68461 Lactuca sativa HOM05D007545 ORTHO05D009579 3.2e-16 90.9 145 38.6
Aqoxy3G04069 Aquilegia oxysepala HOM05D007545 ORTHO05D009579 9.2e-16 89.4 118 39.8
CANSAT64G1149 Cannabis sativa HOM05D007545 ORTHO05D009579 3.5e-15 87.4 125 40.0
Sed0020460 Sechium edule HOM05D007545 ORTHO05D009579 1.1e-13 82.4 141 36.2
ECA238G0700 Erigeron canadensis HOM05D007545 ORTHO05D009579 1.5e-13 82.0 144 34.7
HPP92_026949 Vanilla planifolia HOM05D007545 ORTHO05D009579 1.3e-09 68.9 91 37.4
Nitab4.5_0009075g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.4e-08 65.5 37 83.8
Gorai.007G220500 Gossypium raimondii HOM05D007545 ORTHO05D009579 1.2e-07 62.4 140 31.4
Dinv28181 Davidia involucrata HOM05D007545 ORTHO05D009579 7.8e-07 59.7 47 57.4
SEGI_34198 Sequoiadendron giganteum HOM05D007545 ORTHO05D009579 1.0e-06 59.3 120 32.5
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 8.6e-06 56.2 105 30.5


User provided reference genes

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