Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 3.9e-196 688.0 347 100.0
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 4.0e-185 651.4 355 93.8
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 1.2e-168 596.7 358 84.9
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 6.4e-167 590.9 358 84.6
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 1.6e-165 586.3 358 84.4
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 1.1e-153 547.0 356 80.1
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 3.0e-148 528.9 352 76.7
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 2.4e-145 519.2 361 75.1
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 4.2e-142 508.4 363 73.8
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 2.7e-141 505.8 369 72.6
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 1.4e-140 503.4 360 72.2
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 6.7e-140 501.1 361 73.7
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 3.3e-139 498.8 360 71.9
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 9.7e-139 497.3 303 81.5
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 1.3e-138 496.9 315 80.0
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 1.3e-138 496.9 357 71.4
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 8.2e-138 494.2 281 87.9
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 1.1e-137 493.8 321 77.3
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 1.4e-137 493.4 352 71.9
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 2.4e-137 492.7 354 73.2
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 5.3e-137 491.5 315 78.4
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 6.9e-137 491.1 365 72.6
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 9.1e-137 490.7 357 72.5
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 9.1e-137 490.7 347 74.6
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 1.3e-135 486.9 343 74.6
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 1.3e-135 486.9 349 71.9
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 2.2e-135 486.1 354 72.0
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 2.9e-135 485.7 361 70.4
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 3.8e-135 485.3 302 81.5
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 8.5e-135 484.2 363 70.2
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 1.1e-134 483.8 356 72.2
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 1.1e-134 483.8 366 71.0
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.9e-134 483.0 346 73.1
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 3.2e-134 482.3 346 73.1
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 4.2e-134 481.9 346 71.4
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 4.2e-134 481.9 304 79.3
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 5.5e-134 481.5 365 69.9
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 5.5e-134 481.5 362 69.6
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 7.2e-134 481.1 361 70.4
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 9.4e-134 480.7 359 71.9
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 9.4e-134 480.7 361 69.8
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 2.1e-133 479.6 354 72.6
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 3.6e-133 478.8 352 71.6
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 2.3e-132 476.1 361 69.8
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 5.1e-132 474.9 307 78.5
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 6.7e-132 474.6 332 73.2
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 8.8e-132 474.2 350 71.1
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 5.7e-131 471.5 365 68.8
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 9.7e-131 470.7 366 69.4
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 9.7e-131 470.7 347 71.2
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 1.7e-130 469.9 305 77.0
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 2.2e-130 469.5 361 69.3
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 2.2e-130 469.5 303 78.2
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 2.8e-130 469.2 317 75.1
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 6.3e-130 468.0 352 70.2
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.1e-129 467.2 320 75.0
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 3.1e-129 465.7 327 73.4
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 7.0e-129 464.5 312 77.6
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 7.0e-129 464.5 312 77.9
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 7.0e-129 464.5 411 63.3
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 1.0e-127 460.7 316 75.6
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 2.2e-127 459.5 334 71.0
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 2.9e-127 459.1 313 73.8
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 2.9e-127 459.1 327 73.4
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 5.0e-127 458.4 327 72.5
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 5.0e-127 458.4 298 75.8
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 3.2e-126 455.7 326 71.5
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 9.4e-126 454.1 313 73.5
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 2.7e-125 452.6 327 71.6
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 3.6e-125 452.2 313 73.2
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 4.7e-125 451.8 361 67.0
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 1.4e-124 450.3 308 76.9
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 3.0e-124 449.1 326 71.5
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 3.0e-124 449.1 326 71.5
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.0e-124 449.1 297 77.4
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 1.3e-122 443.7 303 74.6
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 4.8e-122 441.8 360 64.7
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 9.1e-121 437.6 283 77.0
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 8.5e-119 431.0 453 54.3
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 4.4e-115 418.7 300 71.7
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 2.4e-113 412.9 299 70.6
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.9e-111 406.0 306 68.3
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.6e-109 400.2 509 48.9
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 2.7e-109 399.4 302 67.5
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 2.7e-109 399.4 300 68.7
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 1.4e-108 397.1 305 68.5
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 5.2e-108 395.2 313 65.5
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.6e-107 392.9 288 68.1
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 1.8e-105 386.7 453 49.7
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 2.0e-99 366.7 294 68.0
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 2.4e-97 359.8 305 63.0
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.2e-96 357.5 212 84.4
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 2.0e-91 340.1 297 61.6
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.7e-87 327.0 237 71.7
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 9.8e-83 311.2 200 79.0
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 3.7e-82 309.3 341 50.7
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 8.6e-79 298.1 245 65.3
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.9e-78 297.0 245 64.9
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 1.1e-76 291.2 170 86.5
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 5.4e-73 278.9 203 72.4
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 1.3e-71 274.2 166 83.7
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 1.6e-69 267.3 355 47.9
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.1e-68 263.1 194 71.6
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 6.8e-68 261.9 194 71.1
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 6.8e-68 261.9 257 51.8
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 7.6e-67 258.5 189 73.0
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.9e-65 253.8 167 77.2
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.5e-64 249.6 180 71.7
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 7.8e-64 248.4 149 83.9
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 1.9e-62 243.8 144 81.2
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 5.3e-60 235.7 211 59.2
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.3e-55 220.3 259 46.3
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.5e-54 217.6 141 75.9
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 6.9e-44 182.2 106 85.8
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.6e-32 144.4 86 77.9
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 6.7e-31 139.0 109 60.6
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 8.2e-29 132.1 81 80.2
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 2.6e-27 127.1 238 34.0
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.1e-24 117.5 258 33.7
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.0e-23 115.2 102 54.9
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 2.7e-16 90.5 49 81.6


User provided reference genes

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