Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001646g0070 Nicotiana tabacum HOM05D000569 ORTHO05D000418 2.6e-103 378.6 182 100.0
Nitab4.5_0012173g0010 Nicotiana tabacum HOM05D000569 ORTHO05D000418 2.1e-84 315.8 176 86.9
CAN.G416.34 Capsicum annuum HOM05D000569 ORTHO05D000418 4.1e-56 221.9 185 65.9
PGSC0003DMG400004948 Solanum tuberosum HOM05D000569 ORTHO05D000418 5.4e-56 221.5 186 68.8
Solyc04g077260.3 Solanum lycopersicum HOM05D000569 ORTHO05D000418 5.0e-54 214.9 181 68.0
Sopen04g030840 Solanum pennellii HOM05D000569 ORTHO05D000418 1.2e-50 203.8 181 65.2
Peaxi162Scf00160g00722 Petunia axillaris HOM05D000569 ORTHO05D000418 2.6e-42 176.0 212 51.4
Cc10_g07810 Coffea canephora HOM05D000569 ORTHO05D000418 6.4e-41 171.4 187 52.4
Nitab4.5_0005116g0040 Nicotiana tabacum HOM05D000569 ORTHO05D000418 7.1e-40 167.9 214 47.7
Nitab4.5_0001074g0040 Nicotiana tabacum HOM05D000569 ORTHO05D000418 1.2e-39 167.2 218 47.2
Potri.002G113700 Populus trichocarpa HOM05D000569 ORTHO05D000418 5.2e-35 151.8 186 47.8
GSVIVG01009280001 Vitis vinifera HOM05D000569 ORTHO05D000418 5.2e-35 151.8 190 45.3
QL09p016222 Quercus lobata HOM05D000569 ORTHO05D000418 5.8e-34 148.3 184 47.3
Manes.18G051300 Manihot esculenta HOM05D000569 ORTHO05D000418 3.8e-33 145.6 187 46.5
Sabra02G0090100 Salix brachista HOM05D000569 ORTHO05D000418 6.4e-33 144.8 185 46.5
Actinidia19283 Actinidia chinensis HOM05D000569 ORTHO05D000418 1.3e-30 137.1 186 46.8
CSS0029077 Camellia sinensis var. sinensis HOM05D000569 ORTHO05D000418 6.6e-30 134.8 199 43.2
CSS0034271 Camellia sinensis var. sinensis HOM05D000569 ORTHO05D000418 6.6e-30 134.8 199 43.2
Actinidia10236 Actinidia chinensis HOM05D000569 ORTHO05D000418 3.3e-29 132.5 187 45.5
Cfa013721 Carpinus fangiana HOM05D000569 ORTHO05D000418 4.3e-29 132.1 185 47.0
CiPaw.07G170500 Carya illinoinensis HOM05D000569 ORTHO05D000418 4.3e-29 132.1 181 44.8
Oeu053661.1 Olea europaea HOM05D000569 ORTHO05D000418 1.6e-28 130.2 182 42.3
Hma1.2p1_2651F.1_g326170 Hydrangea macrophylla HOM05D000569 ORTHO05D000418 3.6e-28 129.0 173 43.9
Lj4A77T55 Lonicera japonica HOM05D000569 ORTHO05D000418 8.1e-28 127.9 178 46.1
TAR381G0651 Trochodendron aralioides HOM05D000569 ORTHO05D000418 6.9e-27 124.8 178 39.3
TAR628G1027 Trochodendron aralioides HOM05D000569 ORTHO05D000418 8.4e-25 117.9 189 39.2
CiPaw.08G053500 Carya illinoinensis HOM05D000569 ORTHO05D000418 2.4e-24 116.3 192 42.2
Thecc.08G082600 Theobroma cacao HOM05D000569 ORTHO05D000418 3.2e-24 115.9 185 38.9
Lsat_1_v5_gn_9_79301 Lactuca sativa HOM05D000569 ORTHO05D000418 4.2e-24 115.5 170 42.4
Nn6g34550 Nelumbo nucifera HOM05D000569 ORTHO05D000418 4.2e-24 115.5 206 38.8
TAR376G0161 Trochodendron aralioides HOM05D000569 ORTHO05D000418 4.2e-24 115.5 190 36.8
Duzib093G0508 Durio zibethinus HOM05D000569 ORTHO05D000418 7.8e-23 111.3 190 35.8
Duzib116G0003 Durio zibethinus HOM05D000569 ORTHO05D000418 7.8e-23 111.3 185 37.8
vmacro21403 Vaccinium macrocarpon HOM05D000569 ORTHO05D000418 1.0e-22 110.9 168 41.7
Lj4A750T30 Lonicera japonica HOM05D000569 ORTHO05D000418 1.3e-22 110.5 151 45.7
TAR625G0457 Trochodendron aralioides HOM05D000569 ORTHO05D000418 1.3e-22 110.5 176 42.0
Duzib041G0688 Durio zibethinus HOM05D000569 ORTHO05D000418 8.7e-22 107.8 197 38.1
Haze_22365 Corylus avellana HOM05D000569 ORTHO05D000418 1.1e-21 107.5 183 43.7
Rhsim06G0065800 Rhododendron simsii HOM05D000569 ORTHO05D000418 1.5e-21 107.1 182 41.2
Peaxi162Scf01314g00012 Petunia axillaris HOM05D000569 ORTHO05D000418 1.9e-21 106.7 117 58.1
ECA232G4659 Erigeron canadensis HOM05D000569 ORTHO05D000418 3.3e-21 105.9 199 36.2
Glyma.04G048900 Glycine max HOM05D000569 ORTHO05D000418 1.6e-20 103.6 202 36.1
Phvul.009G075000 Phaseolus vulgaris HOM05D000569 ORTHO05D000418 6.2e-20 101.7 188 35.6
Gohir.A05G212850 Gossypium hirsutum HOM05D000569 ORTHO05D000418 1.1e-19 100.9 195 35.9
HanXRQChr09g0253771 Helianthus annuus HOM05D000569 ORTHO05D000418 1.1e-19 100.9 169 39.1
DCAR_009538 Daucus carota HOM05D000569 ORTHO05D000418 3.1e-19 99.4 186 37.6
Gohir.D05G216200 Gossypium hirsutum HOM05D000569 ORTHO05D000418 4.0e-19 99.0 195 35.4
Gorai.009G222900 Gossypium raimondii HOM05D000569 ORTHO05D000418 4.0e-19 99.0 195 35.4
MSTRG.25013 Avicennia marina HOM05D000569 ORTHO05D000418 6.9e-19 98.2 166 38.0
Atru.chr13.889 Acer truncatum HOM05D000569 ORTHO05D000418 5.8e-18 95.1 198 31.3
MBI16_g09810_MAGBIO Magnolia biondii HOM05D000569 ORTHO05D000418 2.9e-17 92.8 180 33.9
Aqoxy7G01408 Aquilegia oxysepala HOM05D000569 ORTHO05D000418 8.4e-17 91.3 186 38.7
CiPaw.07G038200 Carya illinoinensis HOM05D000569 ORTHO05D000418 8.4e-17 91.3 172 40.7
Duzib147G0320 Durio zibethinus HOM05D000569 ORTHO05D000418 8.4e-17 91.3 174 36.2
MBI16_g11015_MAGBIO Magnolia biondii HOM05D000569 ORTHO05D000418 1.9e-16 90.1 188 36.2
Glyma.06G050000 Glycine max HOM05D000569 ORTHO05D000418 5.4e-16 88.6 195 33.8
Dinv39192 Davidia involucrata HOM05D000569 ORTHO05D000418 2.1e-15 86.7 92 53.3
Thecc.01G078100 Theobroma cacao HOM05D000569 ORTHO05D000418 2.7e-15 86.3 185 33.5
Migut.C00438 Erythranthe guttata HOM05D000569 ORTHO05D000418 3.5e-15 85.9 176 34.7
Lalb_Chr23g0267681 Lupinus albus HOM05D000569 ORTHO05D000418 2.5e-13 79.7 187 32.1
Duzib187G0572 Durio zibethinus HOM05D000569 ORTHO05D000418 9.6e-13 77.8 178 32.6
FvH4_2g32440 Fragaria vesca HOM05D000569 ORTHO05D000418 1.3e-12 77.4 236 33.5
TWI12G0388 Tripterygium wilfordii HOM05D000569 ORTHO05D000418 1.6e-12 77.0 136 39.0
FAN24G0336 Fragaria x ananassa HOM05D000569 ORTHO05D000418 2.1e-12 76.6 236 32.6
Gorai.007G227500 Gossypium raimondii HOM05D000569 ORTHO05D000418 2.1e-12 76.6 173 31.2
GSVIVG01004464001 Vitis vinifera HOM05D000569 ORTHO05D000418 2.1e-12 76.6 181 30.9
Lj5g0004608 Lotus japonicus HOM05D000569 ORTHO05D000418 2.8e-12 76.3 183 33.3
Gohir.A11G211300 Gossypium hirsutum HOM05D000569 ORTHO05D000418 4.8e-12 75.5 170 31.8
QL06p038531 Quercus lobata HOM05D000569 ORTHO05D000418 4.8e-12 75.5 169 33.1
TWI56G0346 Tripterygium wilfordii HOM05D000569 ORTHO05D000418 6.2e-12 75.1 198 31.8
PGR031G0087 Punica granatum HOM05D000569 ORTHO05D000418 8.1e-12 74.7 179 31.8
FAN20G2033 Fragaria x ananassa HOM05D000569 ORTHO05D000418 1.4e-11 73.9 235 33.2
SalBow7G2510 Salvia bowleyana HOM05D000569 ORTHO05D000418 1.4e-11 73.9 148 35.8
CSS0006222 Camellia sinensis var. sinensis HOM05D000569 ORTHO05D000418 1.8e-11 73.6 184 33.2
FAN27G0689 Fragaria x ananassa HOM05D000569 ORTHO05D000418 1.8e-11 73.6 211 34.6
Gohir.D11G211800 Gossypium hirsutum HOM05D000569 ORTHO05D000418 1.8e-11 73.6 173 31.2
Hma1.2p1_0424F.1_g150390 Hydrangea macrophylla HOM05D000569 ORTHO05D000418 1.8e-11 73.6 170 31.2
Eucgr.F02207 Eucalyptus grandis HOM05D000569 ORTHO05D000418 2.4e-11 73.2 185 35.1
Glyma.14G090900 Glycine max HOM05D000569 ORTHO05D000418 2.4e-11 73.2 167 32.9
Hund05262 Selenicereus undatus HOM05D000569 ORTHO05D000418 2.4e-11 73.2 208 30.3
Lj1g0025715 Lotus japonicus HOM05D000569 ORTHO05D000418 3.1e-11 72.8 185 31.4
Glyma.17G232220 Glycine max HOM05D000569 ORTHO05D000418 9.0e-11 71.2 157 33.1
Prupe.1G417400 Prunus persica HOM05D000569 ORTHO05D000418 1.5e-10 70.5 189 30.2
Phvul.001G032100 Phaseolus vulgaris HOM05D000569 ORTHO05D000418 2.0e-10 70.1 151 33.8
FAN15G1594 Fragaria x ananassa HOM05D000569 ORTHO05D000418 2.6e-10 69.7 219 32.9
Manes.13G107900 Manihot esculenta HOM05D000569 ORTHO05D000418 3.4e-10 69.3 179 31.3
RcHm_v2.0_Chr6g0310231 Rosa chinensis HOM05D000569 ORTHO05D000418 4.5e-10 68.9 219 33.8
Hma1.2p1_0477F.1_g161050 Hydrangea macrophylla HOM05D000569 ORTHO05D000418 7.6e-10 68.2 181 31.5
MD15G1063300 Malus domestica HOM05D000569 ORTHO05D000418 7.6e-10 68.2 224 30.8
Ciclev10027178m.g Citrus clementina HOM05D000569 ORTHO05D000418 3.8e-09 65.9 184 31.0
Gohir.D12G077700 Gossypium hirsutum HOM05D000569 ORTHO05D000418 1.4e-08 63.9 199 27.6
Gorai.008G086400 Gossypium raimondii HOM05D000569 ORTHO05D000418 1.4e-08 63.9 199 27.6
Potri.007G007900 Populus trichocarpa HOM05D000569 ORTHO05D000418 1.9e-08 63.5 156 32.7
TPR.G30195 Trifolium pratense HOM05D000569 ORTHO05D000418 1.9e-08 63.5 159 36.5
Dinv44920 Davidia involucrata HOM05D000569 ORTHO05D000418 2.4e-08 63.2 161 34.2
Hma1.2p1_2719F.1_g327455 Hydrangea macrophylla HOM05D000569 ORTHO05D000418 2.4e-08 63.2 166 27.1
VMungo0647G1255 Vigna mungo HOM05D000569 ORTHO05D000418 2.4e-08 63.2 157 32.5
EL10Ac1g02338 Beta vulgaris HOM05D000569 ORTHO05D000418 7.1e-08 61.6 184 28.3
MD08G1076200 Malus domestica HOM05D000569 ORTHO05D000418 7.1e-08 61.6 73 46.6
AUR62034976 Chenopodium quinoa HOM05D000569 ORTHO05D000418 9.3e-08 61.2 169 31.4
arahy.Tifrunner.gnm1.ann1.IUPJ20 Arachis hypogaea HOM05D000569 ORTHO05D000418 1.2e-07 60.8 151 30.5
COL.COLO4_11632 Corchorus olitorius HOM05D000569 ORTHO05D000418 2.7e-07 59.7 125 35.2
Medtr3g103570 Medicago truncatula HOM05D000569 ORTHO05D000418 7.9e-07 58.2 192 28.6
Actinidia36413 Actinidia chinensis HOM05D000569 ORTHO05D000418 1.8e-06 57.0 144 27.8
Lj4A167T28 Lonicera japonica HOM05D000569 ORTHO05D000418 1.8e-06 57.0 173 27.7
Medtr1g017140 Medicago truncatula HOM05D000569 ORTHO05D000418 1.8e-06 57.0 148 28.4
Hund28963 Selenicereus undatus HOM05D000569 ORTHO05D000418 1.8e-06 57.0 180 23.9
Hund28965 Selenicereus undatus HOM05D000569 ORTHO05D000418 1.8e-06 57.0 180 23.9
AUR62007558 Chenopodium quinoa HOM05D000569 ORTHO05D000418 3.0e-06 56.2 181 26.0
Sc15g0005310 Simmondsia chinensis HOM05D000569 ORTHO05D000418 3.0e-06 56.2 189 29.1
Rhsim10G0094000 Rhododendron simsii HOM05D000569 ORTHO05D000418 3.9e-06 55.8 170 27.1
Manes.12G118600 Manihot esculenta HOM05D000569 ORTHO05D000418 5.1e-06 55.5 171 28.1
Gohir.A12G080900 Gossypium hirsutum HOM05D000569 ORTHO05D000418 6.7e-06 55.1 175 28.6
TPR.G13130 Trifolium pratense HOM05D000569 ORTHO05D000418 6.7e-06 55.1 145 32.4


User provided reference genes

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