Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 5.4e-100 368.2 278 100.0
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 5.1e-66 255.4 240 63.8
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.6e-59 232.6 238 60.1
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 1.5e-41 174.1 284 45.1
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 6.1e-35 152.1 316 39.2
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 1.0e-34 151.4 316 39.2
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 6.8e-34 148.7 310 39.7
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 4.2e-28 129.4 250 41.2
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 1.5e-17 94.4 341 28.4
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 6.0e-14 82.4 350 42.6
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 6.0e-14 82.4 329 37.1
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 6.6e-13 79.0 345 27.5
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 8.6e-13 78.6 173 32.9
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.6e-11 73.2 95 44.2
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 3.6e-11 73.2 97 42.3
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 6.2e-11 72.4 215 31.2
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 8.0e-11 72.0 100 45.0
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 2.3e-10 70.5 158 34.2
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.3e-10 70.5 96 38.5
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 3.1e-10 70.1 95 37.9
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 3.1e-10 70.1 243 25.5
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 8.9e-10 68.6 99 40.4
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 1.2e-09 68.2 108 39.8
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 3.4e-09 66.6 93 45.2
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 9.8e-09 65.1 166 33.7
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 1.3e-08 64.7 176 30.1
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 1.7e-08 64.3 242 28.1
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 2.2e-08 63.9 228 29.8
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 3.7e-08 63.2 95 38.9
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 8.3e-08 62.0 154 30.5
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 2.4e-07 60.5 181 30.4
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 2.4e-07 60.5 99 37.4
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 3.2e-07 60.1 96 39.6
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 4.1e-07 59.7 99 36.4
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 4.1e-07 59.7 99 36.4
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 9.2e-07 58.5 96 40.6
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 2.1e-06 57.4 241 26.6
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.5e-06 56.6 356 36.8
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 3.5e-06 56.6 197 27.4
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 6.0e-06 55.8 227 25.1
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 6.0e-06 55.8 99 44.4


User provided reference genes

Program Settings