Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 2.9e-249 864.8 434 100.0
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 3.0e-214 748.4 462 82.7
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 6.5e-209 730.7 461 83.1
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 5.5e-208 727.6 455 83.3
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 1.6e-207 726.1 453 83.0
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.4e-198 696.4 443 82.8
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 1.0e-193 680.2 460 77.0
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.9e-192 676.0 464 76.5
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 1.9e-192 676.0 472 74.6
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 4.2e-192 674.9 457 77.7
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 5.5e-192 674.5 457 77.5
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.7e-191 672.2 463 74.5
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 2.7e-191 672.2 462 76.4
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.8e-190 669.5 460 76.1
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 5.2e-190 667.9 460 75.0
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 5.2e-190 667.9 478 73.4
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 6.8e-190 667.5 459 75.8
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 6.8e-190 667.5 458 76.9
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 1.5e-189 666.4 460 76.5
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 3.4e-189 665.2 478 73.4
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 7.5e-189 664.1 455 75.4
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 9.8e-189 663.7 461 73.8
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 2.2e-188 662.5 461 74.8
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 2.8e-188 662.1 462 75.3
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 2.4e-187 659.1 460 74.8
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 2.4e-187 659.1 459 75.6
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 2.4e-187 659.1 460 75.0
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 1.2e-186 656.8 461 74.8
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 2.7e-186 655.6 461 73.8
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 2.7e-186 655.6 461 74.8
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 4.5e-186 654.8 465 74.0
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 5.9e-186 654.4 458 74.7
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 5.9e-186 654.4 460 74.3
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 7.7e-186 654.1 458 74.7
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 1.0e-185 653.7 460 74.6
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.3e-185 653.3 464 73.1
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 2.3e-185 652.5 461 73.8
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 3.8e-185 651.7 460 74.6
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 5.0e-185 651.4 465 73.8
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 6.6e-185 651.0 460 73.9
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 8.6e-185 650.6 461 74.2
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 1.9e-184 649.4 460 73.0
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 4.2e-184 648.3 460 74.1
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 2.1e-183 646.0 430 76.3
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 2.1e-183 646.0 461 72.5
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 3.6e-183 645.2 460 73.7
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 4.7e-183 644.8 461 73.1
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 8.0e-183 644.0 401 81.3
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.0e-182 643.7 460 73.0
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 1.4e-182 643.3 462 73.8
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 1.8e-182 642.9 466 72.3
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 5.2e-182 641.3 459 73.9
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 6.8e-182 641.0 460 73.5
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 1.5e-181 639.8 461 72.9
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 4.4e-181 638.3 408 78.9
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 4.4e-181 638.3 460 72.2
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 1.3e-180 636.7 464 72.4
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 2.2e-180 636.0 425 76.7
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 2.2e-180 636.0 460 73.3
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 3.7e-180 635.2 460 72.0
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 4.9e-180 634.8 466 73.0
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 6.3e-180 634.4 462 72.5
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.4e-179 633.3 386 82.4
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 1.8e-179 632.9 466 71.0
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 2.4e-179 632.5 460 71.7
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 3.1e-179 632.1 460 72.0
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 1.6e-178 629.8 408 79.2
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 2.0e-178 629.4 460 72.0
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 2.0e-178 629.4 477 70.4
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 4.5e-178 628.2 465 70.8
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 4.5e-178 628.2 465 70.8
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 4.5e-178 628.2 462 72.7
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 2.3e-177 625.9 476 70.6
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 6.6e-177 624.4 463 72.8
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 1.1e-176 623.6 458 71.4
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 2.5e-176 622.5 461 70.3
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 1.6e-175 619.8 464 70.3
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 1.6e-175 619.8 461 69.8
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 2.3e-174 615.9 418 74.6
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 3.1e-174 615.5 462 69.9
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 2.0e-173 612.8 526 65.2
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 7.5e-173 610.9 472 68.9
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 2.2e-172 609.4 465 70.3
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 2.4e-171 605.9 366 83.3
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 4.1e-171 605.1 392 76.5
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 8.9e-166 587.4 360 82.5
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 2.4e-163 579.3 386 76.4
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 3.2e-163 578.9 458 69.2
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 1.0e-161 573.9 374 77.8
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.7e-161 573.2 458 68.1
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 4.9e-156 555.1 408 68.9
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 8.3e-156 554.3 428 71.5
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 1.6e-154 550.1 336 82.7
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.2e-151 540.4 336 81.2
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 1.6e-146 523.5 458 61.1
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 3.9e-145 518.8 386 66.8
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 2.6e-141 506.1 394 64.2
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 3.4e-141 505.8 359 73.0
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 9.9e-141 504.2 452 60.0
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 4.9e-140 501.9 359 73.8
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 3.3e-128 462.6 282 81.6
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 3.4e-125 452.6 283 81.3
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.6e-122 443.7 395 61.5
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 1.9e-120 436.8 411 56.2
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 3.3e-120 436.0 303 73.6
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 1.5e-117 427.2 280 77.5
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 7.4e-112 408.3 238 82.4
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 7.4e-112 408.3 238 82.4
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.4e-110 403.3 313 66.5
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.0e-108 397.9 378 60.1
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.8e-108 396.0 327 65.4
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 7.7e-101 371.7 416 46.9
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 4.1e-78 296.2 246 67.9
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 6.1e-74 282.3 322 46.0
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.3e-60 238.0 330 42.4
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.4e-54 217.2 395 35.9
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.2e-47 194.1 121 81.0
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.1e-46 191.8 399 33.3
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 5.4e-46 189.5 99 93.9
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 5.4e-46 189.5 343 35.6
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.2e-42 178.3 101 86.1
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 3.6e-42 176.8 341 34.6
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 2.6e-40 170.6 359 30.9
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 8.4e-39 165.6 151 58.9
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 7.1e-38 162.5 150 56.7
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 3.0e-20 104.0 96 61.5
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 8.7e-20 102.4 51 86.3
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 5.8e-16 89.7 49 93.9
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 9.0e-09 65.9 160 27.5
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 2.6e-08 64.3 43 76.7
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 1.0e-07 62.4 91 46.2
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.3e-07 62.0 37 83.8


User provided reference genes

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