Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001622g0030 Nicotiana tabacum HOM05D007127 ORTHO05D008803 8.2e-67 256.9 129 100.0
Sopen10g001820 Solanum pennellii HOM05D007127 ORTHO05D008803 1.6e-54 216.1 126 86.5
PGSC0003DMG400014371 Solanum tuberosum HOM05D007127 ORTHO05D008803 2.7e-54 215.3 126 85.7
Solyc10g005870.4 Solanum lycopersicum HOM05D007127 ORTHO05D008803 4.8e-51 204.5 126 81.0
CAN.G492.47 Capsicum annuum HOM05D007127 ORTHO05D008803 6.3e-51 204.1 126 79.4
Peaxi162Scf00339g00004 Petunia axillaris HOM05D007127 ORTHO05D008803 1.4e-50 203.0 125 80.8
Dinv40887 Davidia involucrata HOM05D003312 ORTHO05D003792 2.5e-39 165.6 124 65.3
CiPaw.11G207200 Carya illinoinensis HOM05D007127 ORTHO05D008803 2.0e-36 156.0 119 63.0
Cfa021894 Carpinus fangiana HOM05D007127 ORTHO05D008803 1.3e-35 153.3 124 59.7
MSTRG.7016 Avicennia marina HOM05D007127 ORTHO05D008803 1.7e-35 152.9 132 59.1
Haze_09871 Corylus avellana HOM05D007127 ORTHO05D008803 1.7e-35 152.9 124 59.7
Thecc.07G007600 Theobroma cacao HOM05D007127 ORTHO05D008803 2.2e-35 152.5 109 65.1
Potri.001G467100 Populus trichocarpa HOM05D007127 ORTHO05D008803 2.8e-35 152.1 119 63.0
Duzib213G0866 Durio zibethinus HOM05D007127 ORTHO05D008803 2.4e-34 149.1 109 65.1
Rhsim06G0232700 Rhododendron simsii HOM05D007127 ORTHO05D008803 3.1e-34 148.7 126 57.9
QL08p002654 Quercus lobata HOM05D007127 ORTHO05D008803 4.1e-34 148.3 114 60.5
Migut.M01626 Erythranthe guttata HOM05D007127 ORTHO05D008803 5.4e-34 147.9 119 63.9
Gohir.D01G078500 Gossypium hirsutum HOM05D007127 ORTHO05D008803 7.0e-34 147.5 114 63.2
Sabra16G0317000 Salix brachista HOM05D007127 ORTHO05D008803 7.0e-34 147.5 119 62.2
Oeu005465.2 Olea europaea HOM05D007127 ORTHO05D008803 2.0e-33 146.0 119 61.3
DCAR_013258 Daucus carota HOM05D007127 ORTHO05D008803 2.7e-33 145.6 118 62.7
Gohir.A01G094000 Gossypium hirsutum HOM05D007127 ORTHO05D008803 2.7e-33 145.6 114 61.4
Gorai.002G103100 Gossypium raimondii HOM05D007127 ORTHO05D008803 2.7e-33 145.6 114 62.3
Hma1.2p1_0193F.1_g083963 Hydrangea macrophylla HOM05D007127 ORTHO05D008803 2.7e-33 145.6 110 65.5
Cc05_g15330 Coffea canephora HOM05D007127 ORTHO05D008803 4.5e-33 144.8 110 64.5
Ciclev10009425m.g Citrus clementina HOM05D007127 ORTHO05D008803 1.0e-32 143.7 109 62.4
MD03G1036700 Malus domestica HOM05D007127 ORTHO05D008803 2.3e-32 142.5 124 58.1
Eucgr.F03672 Eucalyptus grandis HOM05D007127 ORTHO05D008803 2.9e-32 142.1 110 60.9
TWI39G0351 Tripterygium wilfordii HOM05D007127 ORTHO05D008803 1.2e-30 136.7 124 57.3
MBI14_g43080_MAGBIO Magnolia biondii HOM05D007127 ORTHO05D008803 2.1e-30 136.0 98 65.3
Manes.09G155700 Manihot esculenta HOM05D007127 ORTHO05D008803 2.1e-30 136.0 110 61.8
GSVIVG01014748001 Vitis vinifera HOM05D007127 ORTHO05D008803 2.8e-30 135.6 109 62.4
CsaV3_7G023830 Cucumis sativus L. HOM05D007127 ORTHO05D008803 3.6e-30 135.2 111 60.4
TAR627G0858 Trochodendron aralioides HOM05D007127 ORTHO05D008803 6.1e-30 134.4 109 59.6
SalBow8G4011 Salvia bowleyana HOM05D007127 ORTHO05D008803 8.0e-30 134.0 118 56.8
Prupe.6G028700 Prunus persica HOM05D007127 ORTHO05D008803 1.0e-29 133.7 124 57.3
Nn1g07579 Nelumbo nucifera HOM05D007127 ORTHO05D008803 1.4e-29 133.3 119 58.0
Lalb_Chr15g0082331 Lupinus albus HOM05D007127 ORTHO05D008803 2.3e-29 132.5 118 55.1
RcHm_v2.0_Chr5g0075531 Rosa chinensis HOM05D007127 ORTHO05D008803 2.3e-29 132.5 116 60.3
FAN16G2471 Fragaria x ananassa HOM05D007127 ORTHO05D008803 4.0e-29 131.7 102 65.7
PGR031G3625 Punica granatum HOM05D007127 ORTHO05D008803 4.0e-29 131.7 103 64.1
SGA_v2.0_scaffold171G38842 Striga asiatica HOM05D007127 ORTHO05D008803 8.8e-29 130.6 123 56.1
FAN25G0358 Fragaria x ananassa HOM05D007127 ORTHO05D008803 1.2e-28 130.2 102 64.7
Glyma.18G074000 Glycine max HOM05D007127 ORTHO05D008803 2.6e-28 129.0 114 57.9
Lj8A180T97 Lonicera japonica HOM05D007127 ORTHO05D008803 2.6e-28 129.0 91 69.2
SalBow1G6811 Salvia bowleyana HOM05D007127 ORTHO05D008803 2.6e-28 129.0 118 55.1
FAN11G0992 Fragaria x ananassa HOM05D007127 ORTHO05D008803 3.4e-28 128.6 102 64.7
FvH4_3g42230 Fragaria vesca HOM05D007127 ORTHO05D008803 4.4e-28 128.3 102 64.7
Ca_14836_v3 Cicer arietinum L. HOM05D007127 ORTHO05D008803 7.5e-28 127.5 116 56.0
COL.COLO4_07744 Corchorus olitorius HOM05D007127 ORTHO05D008803 7.5e-28 127.5 165 44.8
Lj6g0006308 Lotus japonicus HOM05D007127 ORTHO05D008803 9.8e-28 127.1 110 60.0
arahy.Tifrunner.gnm1.ann1.I2ZJD2 Arachis hypogaea HOM05D007127 ORTHO05D008803 1.7e-27 126.3 126 51.6
BolC7t45986H Brassica oleracea HOM05D000491 ORTHO05D000359 3.7e-27 125.2 96 65.6
Thhalv10026261m.g Eutrema salsugineum HOM05D007127 ORTHO05D008803 3.7e-27 125.2 107 60.7
Medtr3g060750 Medicago truncatula HOM05D007127 ORTHO05D008803 3.7e-27 125.2 115 56.5
Sp7g24510 Schrenkiella parvula HOM05D007127 ORTHO05D008803 3.7e-27 125.2 108 60.2
BcaC06g32738 Brassica carinata HOM05D007127 ORTHO05D008803 6.3e-27 124.4 96 65.6
C07p55280 Brassica napus HOM05D007127 ORTHO05D008803 6.3e-27 124.4 96 65.6
Carub.0007s1432 Capsella rubella HOM05D007127 ORTHO05D008803 6.3e-27 124.4 106 59.4
A03p56780 Brassica napus HOM05D000491 ORTHO05D008803 8.3e-27 124.0 96 64.6
BraA03t14746Z Brassica rapa HOM05D000491 ORTHO05D000359 8.3e-27 124.0 96 64.6
Actinidia10571 Actinidia chinensis HOM05D007127 ORTHO05D008803 1.4e-26 123.2 123 51.2
TPR.G17936 Trifolium pratense HOM05D007127 ORTHO05D008803 1.4e-26 123.2 119 53.8
vmacro11616 Vaccinium macrocarpon HOM05D007127 ORTHO05D008803 1.4e-26 123.2 120 51.7
THA.LOC104811685 Tarenaya hassleriana HOM05D007127 ORTHO05D008803 2.4e-26 122.5 111 58.6
ClCG09G021550 Citrullus lanatus HOM05D007127 ORTHO05D008803 4.1e-26 121.7 122 54.1
AL7G26340 Arabidopsis lyrata HOM05D007127 ORTHO05D008803 1.2e-25 120.2 107 57.0
AT4G26555 Arabidopsis thaliana HOM05D007127 ORTHO05D008803 1.6e-25 119.8 105 58.1
CANSAT11G1343 Cannabis sativa HOM05D007127 ORTHO05D008803 2.0e-25 119.4 126 53.2
CARHR234140 Cardamine hirsuta HOM05D007127 ORTHO05D008803 2.0e-25 119.4 107 57.0
ECA246G1683 Erigeron canadensis HOM05D007127 ORTHO05D008803 1.7e-24 116.3 114 54.4
PSO210G6734 Papaver somniferum HOM05D007127 ORTHO05D008803 1.7e-24 116.3 102 57.8
HanXRQChr08g0232691 Helianthus annuus HOM05D007127 ORTHO05D008803 3.8e-24 115.2 102 56.9
EL10Ac4g07544 Beta vulgaris HOM05D007127 ORTHO05D008803 1.9e-23 112.8 118 50.8
SEGI_17483 Sequoiadendron giganteum HOM05D007127 ORTHO05D008803 1.9e-23 112.8 119 50.4
Lsat_1_v5_gn_5_2120 Lactuca sativa HOM05D007127 ORTHO05D008803 3.3e-23 112.1 102 55.9
Aqoxy1G04096 Aquilegia oxysepala HOM05D007127 ORTHO05D008803 7.3e-23 110.9 106 56.6
AUR62017126 Chenopodium quinoa HOM05D007127 ORTHO05D008803 1.6e-22 109.8 118 48.3
HPP92_021913 Vanilla planifolia HOM05D007127 ORTHO05D008803 1.8e-21 106.3 99 55.6
CDE11G0730 Ceratophyllum demersum HOM05D007127 ORTHO05D008803 2.0e-20 102.8 110 54.5
AUR62035684 Chenopodium quinoa HOM05D007127 ORTHO05D008803 2.0e-20 102.8 120 45.0
Atru.BG.133.p Acer truncatum HOM05D007127 ORTHO05D008803 3.4e-20 102.1 52 82.7
Actinidia30375 Actinidia chinensis HOM05D007127 ORTHO05D008803 1.3e-19 100.1 53 81.1
Os02g0199300 Oryza sativa ssp. japonica HOM05D007127 ORTHO05D008803 1.3e-19 100.1 66 72.7
FAN16G1842 Fragaria x ananassa HOM05D000097 ORTHO05D008803 3.7e-19 98.6 64 71.9
Aa31LG5G11910 Aethionema arabicum HOM05D007127 ORTHO05D008803 4.9e-19 98.2 63 71.4
Hma1.2p1_0193F.1_g083966 Hydrangea macrophylla HOM05D007127 ORTHO05D008803 6.4e-19 97.8 48 89.6
Cpa.g.sc12.104 Carica papaya HOM05D007127 ORTHO05D008803 8.3e-19 97.4 58 75.9
Zm00001eb205840 Zea mays HOM05D007127 ORTHO05D008803 1.8e-18 96.3 75 65.3
ATR0751G120 Amborella trichopoda HOM05D007127 ORTHO05D008803 3.2e-18 95.5 62 72.6
Glyma.08G333000 Glycine max HOM05D007127 ORTHO05D008803 1.7e-16 89.7 54 75.9
arahy.Tifrunner.gnm1.ann1.SL03ST Arachis hypogaea HOM05D007127 ORTHO05D008803 3.0e-16 89.0 150 36.0
Phvul.006G059272 Phaseolus vulgaris HOM05D007127 ORTHO05D008803 3.0e-16 89.0 86 52.3
Pp3c5_10020 Physcomitrium patens HOM05D007127 ORTHO05D008803 1.5e-15 86.7 116 42.2
Hund01879 Selenicereus undatus HOM05D007127 ORTHO05D008803 7.3e-15 84.3 142 37.3
AagrBONN_evm.TU.Sc2ySwM_368.1220 Anthoceros agrestis HOM05D007127 ORTHO05D008803 3.1e-13 79.0 67 53.7
RcHm_v2.0_Chr5g0075491 Rosa chinensis HOM05D007127 ORTHO05D008803 3.1e-13 79.0 52 69.2
Medtr3g060790 Medicago truncatula HOM05D007127 ORTHO05D008803 2.0e-12 76.3 52 63.5
SMO356G0109 Selaginella moellendorffii HOM05D007127 ORTHO05D008803 5.4e-10 68.2 50 62.0
VMungo0540G0661 Vigna mungo HOM05D007127 ORTHO05D008803 1.6e-09 66.6 117 38.5
Medtr3g060760 Medicago truncatula HOM05D007127 ORTHO05D008803 3.5e-09 65.5 52 57.7
Zm00001eb416620 Zea mays HOM05D000723 ORTHO05D008803 5.0e-08 61.6 77 44.2


User provided reference genes

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