Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 0.0e+00 1207.2 625 100.0
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 1.4e-308 1062.4 608 91.6
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 1.6e-200 703.4 617 66.0
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 1.1e-198 697.2 617 65.0
PGSC0003DMG400012697 Solanum tuberosum HOM05D017238 ORTHO05D009536 4.4e-182 642.1 550 66.7
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 2.7e-179 632.9 624 60.4
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 7.0e-172 608.2 706 52.4
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 1.1e-34 152.5 673 28.1
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 7.1e-31 139.8 317 35.0
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 4.6e-30 137.1 606 28.1
Actinidia09304 Actinidia chinensis HOM05D007911 ORTHO05D009536 1.2e-27 129.0 504 29.8
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 2.8e-27 127.9 152 48.7
Hma1.2p1_0005F.1_g004500 Hydrangea macrophylla HOM05D007911 ORTHO05D009536 1.4e-26 125.6 135 51.9
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 3.1e-26 124.4 173 43.4
CSS0030068 Camellia sinensis var. sinensis HOM05D007911 ORTHO05D009536 4.0e-26 124.0 116 56.9
Gohir.A01G130811 Gossypium hirsutum HOM05D007911 ORTHO05D009536 4.0e-26 124.0 145 44.8
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 8.9e-26 122.9 249 35.7
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 4.4e-25 120.6 168 41.7
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 7.6e-25 119.8 173 41.0
Manes.08G052400 Manihot esculenta HOM05D007911 ORTHO05D009536 9.9e-25 119.4 129 49.6
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 1.7e-24 118.6 141 48.9
Cfa016782 Carpinus fangiana HOM05D007911 ORTHO05D009536 3.8e-24 117.5 150 45.3
RcHm_v2.0_Chr3g0483481 Rosa chinensis HOM05D020102 ORTHO05D009536 1.9e-23 115.2 256 34.4
Haze_19798 Corylus avellana HOM05D007911 ORTHO05D009536 2.4e-23 114.8 414 30.4
Duzib093G1996 Durio zibethinus HOM05D007911 ORTHO05D009536 4.2e-23 114.0 120 50.0
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 4.6e-22 110.5 138 46.4
vmacro21970 Vaccinium macrocarpon HOM05D007911 ORTHO05D009536 1.0e-21 109.4 123 46.3
Ciclev10006879m.g Citrus clementina HOM05D007911 ORTHO05D009536 1.7e-21 108.6 133 44.4
Atru.chr1.1239 Acer truncatum HOM05D007911 ORTHO05D009536 1.1e-20 105.9 133 46.6
Glyma.03G133900 Glycine max HOM05D007911 ORTHO05D009536 1.1e-20 105.9 139 43.2
CiPaw.09G040100 Carya illinoinensis HOM05D007911 ORTHO05D009536 1.5e-20 105.5 205 37.1
TAR636G2018 Trochodendron aralioides HOM05D007911 ORTHO05D009536 5.6e-20 103.6 236 33.5
TWI53G0905 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 7.3e-20 103.2 639 24.9
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 9.6e-20 102.8 186 36.0
TWI77G0280 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 9.6e-20 102.8 587 25.6
Cpa.g.sc1210.2 Carica papaya HOM05D007911 ORTHO05D009536 1.3e-19 102.4 147 44.9
SalBow6G0990 Salvia bowleyana HOM05D007911 ORTHO05D009536 1.6e-19 102.1 374 29.1
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 4.8e-19 100.5 186 35.5
Ca_08429_v3 Cicer arietinum L. HOM05D007911 ORTHO05D009536 6.2e-19 100.1 133 44.4
SalBow6G1456 Salvia bowleyana HOM05D007911 ORTHO05D009536 6.2e-19 100.1 374 29.1
Phvul.001G129400 Phaseolus vulgaris HOM05D007911 ORTHO05D009536 1.1e-18 99.4 642 25.1
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 1.8e-18 98.6 136 42.6
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 1.8e-18 98.6 136 42.6
Duzib106G0073 Durio zibethinus HOM05D007911 ORTHO05D009536 4.0e-18 97.4 143 40.6
PGR004G0024 Punica granatum HOM05D007911 ORTHO05D009536 4.0e-18 97.4 203 32.5
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 4.0e-18 97.4 146 40.4
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 1.2e-17 95.9 599 25.4
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 2.0e-17 95.1 109 41.3
Glyma.19G136200 Glycine max HOM05D007911 ORTHO05D009536 3.4e-17 94.4 143 39.2
TPR.G18258 Trifolium pratense HOM05D007911 ORTHO05D009536 5.8e-17 93.6 133 42.9
Atru.chr12.1999 Acer truncatum HOM05D007911 ORTHO05D009536 9.9e-17 92.8 133 42.9
Eucgr.A02312 Eucalyptus grandis HOM05D007911 ORTHO05D009536 1.3e-16 92.4 593 23.3
Medtr7g091040 Medicago truncatula HOM05D007911 ORTHO05D009536 1.7e-16 92.0 136 39.0
Lj1g0009156 Lotus japonicus HOM05D007911 ORTHO05D009536 2.9e-16 91.3 148 37.2
Lalb_Chr01g0017411 Lupinus albus HOM05D007911 ORTHO05D009536 3.8e-16 90.9 141 42.6
Sopen10g030520 Solanum pennellii HOM05D029882 ORTHO05D037717 4.9e-16 90.5 136 44.1
SGA_v2.0_scaffold105G30375 Striga asiatica HOM05D007911 ORTHO05D009536 6.4e-16 90.1 149 37.6
Potri.006G046700 Populus trichocarpa HOM05D007911 ORTHO05D009536 8.4e-16 89.7 297 29.6
AUR62026093 Chenopodium quinoa HOM05D021336 ORTHO05D009536 1.4e-15 89.0 216 32.9
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 1.4e-15 89.0 141 39.7
Psat3g074440 Pisum sativum HOM05D007911 ORTHO05D009536 1.4e-15 89.0 99 46.5
arahy.Tifrunner.gnm1.ann1.XA9LH2 Arachis hypogaea HOM05D007911 ORTHO05D009536 5.4e-15 87.0 129 40.3
MELO3C026340.2 Cucumis melo HOM05D007911 ORTHO05D009536 5.4e-15 87.0 282 30.1
VMungo0720G0307 Vigna mungo HOM05D007911 ORTHO05D009536 5.4e-15 87.0 109 43.1
Nitab4.5_0000677g0220 Nicotiana tabacum HOM05D017238 ORTHO05D009536 7.1e-15 86.7 61 67.2
Nitab4.5_0000677g0260 Nicotiana tabacum HOM05D029882 ORTHO05D009536 7.1e-15 86.7 584 24.3
Solyc10g079900.3 Solanum lycopersicum HOM05D029882 ORTHO05D037717 7.1e-15 86.7 136 42.6
ClCG04G003660 Citrullus lanatus HOM05D007911 ORTHO05D009536 1.2e-14 85.9 285 28.8
HanXRQChr08g0234551 Helianthus annuus HOM05D007911 ORTHO05D009536 1.2e-14 85.9 144 37.5
ECA247G2582 Erigeron canadensis HOM05D007911 ORTHO05D009536 3.5e-14 84.3 119 42.0
FAN09G4584 Fragaria x ananassa HOM05D020102 ORTHO05D009536 4.6e-14 84.0 141 39.7
FvH4_6g24470 Fragaria vesca HOM05D020102 ORTHO05D009536 6.0e-14 83.6 284 31.3
PSO339G2888 Papaver somniferum HOM05D007911 ORTHO05D009536 6.0e-14 83.6 155 34.8
Medtr2g012890 Medicago truncatula HOM05D007911 ORTHO05D009536 7.8e-14 83.2 110 40.9
Nn2g15134 Nelumbo nucifera HOM05D007911 ORTHO05D009536 7.8e-14 83.2 154 36.4
PGSC0003DMG400029827 Solanum tuberosum HOM05D029882 ORTHO05D037717 1.0e-13 82.8 136 43.4
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 1.0e-13 82.8 629 23.5
Lsat_1_v5_gn_9_31060 Lactuca sativa HOM05D007911 ORTHO05D009536 2.3e-13 81.6 116 42.2
Hund24682 Selenicereus undatus HOM05D007911 ORTHO05D009536 3.9e-13 80.9 149 35.6
FAN05G5247 Fragaria x ananassa HOM05D020102 ORTHO05D009536 8.7e-13 79.7 139 36.7
FAN14G4000 Fragaria x ananassa HOM05D020102 ORTHO05D009536 1.1e-12 79.3 284 30.3
SGA_v2.0_scaffold69G23124 Striga asiatica HOM05D007911 ORTHO05D009536 2.5e-12 78.2 132 36.4
EL10Ac3g07134 Beta vulgaris HOM05D021336 ORTHO05D009536 4.3e-12 77.4 218 30.7
Aqoxy1G00297 Aquilegia oxysepala HOM05D007911 ORTHO05D009536 7.3e-12 76.6 132 33.3
Hund19135 Selenicereus undatus HOM05D021336 ORTHO05D009536 1.6e-11 75.5 220 32.7
PSO384G4398 Papaver somniferum HOM05D007911 ORTHO05D009536 3.6e-11 74.3 155 33.5
AUR62024506 Chenopodium quinoa HOM05D021336 ORTHO05D009536 8.1e-11 73.2 208 30.8
Sed0016742 Sechium edule HOM05D007911 ORTHO05D009536 1.1e-10 72.8 111 37.8
Ah.04g151450 Amaranthus hybridus HOM05D021336 ORTHO05D009536 4.9e-08 63.9 116 36.2
Sc13g0001600 Simmondsia chinensis HOM05D007911 ORTHO05D009536 1.4e-07 62.4 326 26.7


User provided reference genes

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