Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.1e-63 246.5 124 100.0
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.3e-56 223.0 120 93.3
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 2.5e-41 172.2 119 74.8
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 5.7e-41 171.0 113 77.0
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 7.4e-41 170.6 113 77.0
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 3.7e-40 168.3 118 72.9
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 1.8e-39 166.0 103 80.6
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 8.2e-24 114.0 108 54.6
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 9.1e-23 110.5 114 51.8
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 9.1e-23 110.5 84 60.7
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 9.1e-23 110.5 84 60.7
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 9.1e-23 110.5 87 59.8
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 1.2e-22 110.2 134 47.8
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.6e-22 109.8 120 53.3
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 2.0e-22 109.4 87 59.8
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 2.7e-22 109.0 132 50.8
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 3.5e-22 108.6 118 50.8
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 4.5e-22 108.2 129 46.5
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.0e-21 107.1 83 63.9
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 1.7e-21 106.3 88 55.7
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.7e-21 106.3 76 65.8
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.7e-21 106.3 83 59.0
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 2.2e-21 105.9 76 65.8
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.2e-21 105.9 76 65.8
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.2e-21 105.9 76 65.8
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 2.9e-21 105.5 83 62.7
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 2.9e-21 105.5 84 59.5
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 2.9e-21 105.5 83 60.2
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 3.8e-21 105.1 83 60.2
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 3.8e-21 105.1 82 59.8
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 5.0e-21 104.8 69 69.6
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 6.5e-21 104.4 128 50.0
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 6.5e-21 104.4 85 57.6
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 6.5e-21 104.4 81 59.3
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 8.5e-21 104.0 81 61.7
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 1.1e-20 103.6 70 67.1
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 1.5e-20 103.2 123 46.3
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.5e-20 103.2 84 59.5
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 1.9e-20 102.8 68 67.6
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 2.5e-20 102.4 125 48.0
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 2.5e-20 102.4 87 58.6
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 3.2e-20 102.1 85 58.8
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 3.2e-20 102.1 84 56.0
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 3.2e-20 102.1 96 54.2
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.2e-20 102.1 117 50.4
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 7.2e-20 100.9 89 53.9
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 1.2e-19 100.1 116 50.9
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.2e-19 100.1 119 49.6
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.2e-19 100.1 125 48.8
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 1.6e-19 99.8 96 54.2
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 1.6e-19 99.8 119 47.9
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.1e-19 99.4 122 48.4
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.1e-19 99.4 69 66.7
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 2.1e-19 99.4 127 46.5
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 2.7e-19 99.0 128 46.1
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 2.7e-19 99.0 77 59.7
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 3.6e-19 98.6 81 59.3
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 3.6e-19 98.6 65 66.2
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 3.6e-19 98.6 132 40.9
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 3.6e-19 98.6 132 40.9
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.6e-19 98.6 118 50.8
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 3.6e-19 98.6 123 45.5
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 3.6e-19 98.6 77 61.0
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 3.6e-19 98.6 115 49.6
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 3.6e-19 98.6 126 46.0
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 4.7e-19 98.2 131 46.6
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 8.0e-19 97.4 83 57.8
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 1.0e-18 97.1 124 41.9
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 2.3e-18 95.9 62 69.4
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 2.3e-18 95.9 83 55.4
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 3.0e-18 95.5 94 52.1
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 3.0e-18 95.5 94 52.1
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 3.0e-18 95.5 82 52.4
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 3.0e-18 95.5 122 45.9
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 4.0e-18 95.1 92 53.3
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 4.0e-18 95.1 82 53.7
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.2e-17 93.6 96 50.0
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 1.2e-17 93.6 112 46.4
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 3.4e-17 92.0 102 45.1
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 3.4e-17 92.0 83 56.6
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 4.4e-17 91.7 73 57.5
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 4.4e-17 91.7 81 54.3
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 5.7e-17 91.3 81 55.6
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 5.7e-17 91.3 92 48.9
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 7.5e-17 90.9 73 61.6
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 7.5e-17 90.9 63 63.5
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 7.5e-17 90.9 63 63.5
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.7e-16 89.7 72 56.9
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 1.7e-16 89.7 92 51.1
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 2.2e-16 89.4 70 62.9
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.8e-16 89.0 61 65.6
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 2.8e-16 89.0 88 51.1
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 3.7e-16 88.6 94 48.9
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 6.3e-16 87.8 64 60.9
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 1.4e-15 86.7 92 51.1
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.8e-15 86.3 66 59.1
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 2.4e-15 85.9 62 62.9
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 5.4e-15 84.7 76 55.3
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 2.7e-14 82.4 113 42.5
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 3.8e-13 78.6 82 52.4
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 5.0e-13 78.2 70 54.3
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 8.5e-13 77.4 86 47.7
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 8.5e-13 77.4 86 47.7
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 4.2e-12 75.1 85 45.9
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.4e-10 70.1 90 43.3
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 8.8e-10 67.4 79 48.1
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 8.8e-10 67.4 57 54.4
CBR_g41355 Chara braunii HOM05D005503 ORTHO05D008949 4.5e-06 55.1 66 43.9


User provided reference genes

Program Settings