Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 3.7e-148 528.1 254 100.0
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.8e-142 509.2 264 93.9
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 1.5e-109 399.8 261 74.3
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 7.6e-109 397.5 262 73.7
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 1.0e-108 397.1 238 81.9
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 6.3e-87 324.7 269 67.7
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 8.2e-79 297.7 247 57.9
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 2.4e-78 296.2 250 59.2
Nitab4.5_0000826g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 2.1e-74 283.1 158 88.6
SalBow1G4167 Salvia bowleyana HOM05D007529 ORTHO05D007451 8.8e-73 277.7 246 55.3
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 4.4e-72 275.4 258 55.4
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 2.2e-71 273.1 253 51.0
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 7.7e-69 264.6 249 53.8
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 8.5e-68 261.2 260 50.8
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 4.7e-66 255.4 251 48.6
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 5.2e-65 251.9 243 49.0
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 6.8e-65 251.5 257 50.2
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 8.8e-65 251.1 248 48.4
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 2.0e-64 250.0 249 50.6
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 8.3e-63 244.6 246 48.4
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 8.3e-63 244.6 242 50.8
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 1.4e-62 243.8 253 49.0
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 2.4e-62 243.0 253 49.0
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 5.4e-62 241.9 252 52.0
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.2e-61 240.7 245 47.8
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 1.3e-60 237.3 249 49.0
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 1.3e-60 237.3 254 47.6
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 1.9e-59 233.4 262 48.1
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 2.5e-59 233.0 245 46.9
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 2.5e-59 233.0 205 52.2
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 4.7e-58 228.8 252 46.8
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.0e-57 227.6 245 45.7
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 2.0e-56 223.4 246 45.5
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 4.4e-56 222.2 244 44.7
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 4.4e-56 222.2 251 47.8
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 5.7e-56 221.9 250 47.2
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 2.2e-55 219.9 250 45.6
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 3.7e-55 219.2 209 50.2
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 3.7e-55 219.2 277 41.2
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 3.7e-55 219.2 247 44.5
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 3.7e-55 219.2 247 43.7
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 4.9e-55 218.8 261 42.5
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 4.1e-54 215.7 278 39.2
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 7.0e-54 214.9 245 46.9
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 7.0e-54 214.9 244 45.5
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 9.2e-54 214.5 247 45.7
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 2.7e-53 213.0 253 44.3
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.7e-53 213.0 257 45.5
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 4.6e-53 212.2 258 45.3
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 7.8e-53 211.5 257 45.1
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 1.3e-52 210.7 248 45.6
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 5.0e-52 208.8 255 45.5
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 2.1e-50 203.4 257 43.2
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 3.6e-50 202.6 249 45.0
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 6.2e-50 201.8 247 42.5
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.4e-49 200.7 249 45.0
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 5.2e-49 198.7 266 38.7
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 6.8e-49 198.4 272 40.4
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.9e-49 198.0 230 46.1
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 7.5e-48 194.9 241 44.8
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 9.8e-48 194.5 267 40.4
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 9.8e-48 194.5 252 43.3
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 2.9e-47 193.0 246 43.1
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 3.2e-46 189.5 254 39.8
DCAR_013619 Daucus carota HOM05D007529 ORTHO05D007451 1.6e-45 187.2 259 40.5
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 4.6e-45 185.7 209 47.8
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 3.9e-44 182.6 209 44.5
Aqoxy7G01198 Aquilegia oxysepala HOM05D007529 ORTHO05D007451 6.2e-42 175.3 214 42.5
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 6.4e-39 165.2 188 46.8
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 1.1e-38 164.5 248 37.9
Nn1g04791 Nelumbo nucifera HOM05D007529 ORTHO05D007451 9.2e-38 161.4 251 37.5
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 7.8e-37 158.3 251 36.3
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 1.9e-35 153.7 257 37.4
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 2.5e-35 153.3 198 42.9
CiPaw.09G042800 Carya illinoinensis HOM05D007529 ORTHO05D007451 2.1e-34 150.2 261 38.3
Haze_19770 Corylus avellana HOM05D007529 ORTHO05D007451 1.8e-33 147.1 177 44.1
Sabra04G0050900 Salix brachista HOM05D007529 ORTHO05D007451 6.8e-33 145.2 229 35.8
FvH4_2g38461 Fragaria vesca HOM05D007529 ORTHO05D007451 1.6e-29 134.0 186 41.4
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 2.1e-29 133.7 249 34.1
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 6.6e-28 128.6 249 33.3
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 7.3e-27 125.2 126 48.4
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 9.6e-27 124.8 246 30.5
CDE11G0566 Ceratophyllum demersum HOM05D007529 ORTHO05D007451 9.6e-27 124.8 177 36.2
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 6.9e-25 118.6 249 30.5
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 4.4e-24 115.9 248 31.5
Nn1g01084 Nelumbo nucifera HOM05D007529 ORTHO05D007451 7.6e-24 115.2 107 53.3
Potri.004G077301 Populus trichocarpa HOM05D007529 ORTHO05D007451 2.9e-23 113.2 159 38.4
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 1.6e-21 107.5 180 36.1
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 3.5e-21 106.3 123 48.8
AUR62026141 Chenopodium quinoa HOM05D007529 ORTHO05D007451 7.8e-21 105.1 135 41.5
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 1.7e-20 104.0 259 30.5
SEGI_22599 Sequoiadendron giganteum HOM05D007529 ORTHO05D007451 3.3e-19 99.8 250 29.2
FAN17G2871 Fragaria x ananassa HOM05D007529 ORTHO05D011815 6.9e-17 92.0 94 47.9
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 6.9e-17 92.0 256 27.3
THA.LOC104825174 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 4.5e-16 89.4 146 37.7
ClCG04G003940 Citrullus lanatus HOM05D007529 ORTHO05D007451 5.8e-16 89.0 78 52.6
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 9.9e-16 88.2 248 28.6
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 1.3e-15 87.8 248 28.6
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 3.8e-15 86.3 248 29.0
MELO3C014210.2 Cucumis melo HOM05D007529 ORTHO05D007451 3.8e-15 86.3 78 50.0
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 4.9e-15 85.9 248 27.8
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 8.4e-15 85.1 248 28.2
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 8.4e-15 85.1 248 28.2
Cpa.g.sc5.217 Carica papaya HOM05D007529 ORTHO05D007451 1.1e-14 84.7 85 49.4
CsaV3_4G021970 Cucumis sativus L. HOM05D007529 ORTHO05D007451 1.1e-14 84.7 75 49.3
FAN12G3498 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.1e-14 84.7 159 34.6
SMO340G0132 Selaginella moellendorffii HOM05D027965 ORTHO05D007451 1.1e-14 84.7 293 24.6
C04p51340 Brassica napus HOM05D005503 ORTHO05D007451 1.4e-14 84.3 247 27.9
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 1.9e-14 84.0 248 28.6
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.9e-14 84.0 250 26.0
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 2.4e-14 83.6 247 27.5
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 2.4e-14 83.6 247 27.5
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 4.2e-14 82.8 254 26.0
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 7.1e-14 82.0 245 27.3
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 1.2e-13 81.3 248 28.2
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 1.2e-13 81.3 248 28.2
FvH4_4g15602 Fragaria vesca HOM05D007529 ORTHO05D007451 2.1e-13 80.5 161 37.3
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 6.0e-13 79.0 243 28.0
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 2.3e-12 77.0 243 28.0
Cpa.g.sc5.218 Carica papaya HOM05D007529 ORTHO05D007451 3.9e-12 76.3 85 42.4
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 5.1e-12 75.9 243 26.3
FAN22G2112 Fragaria x ananassa HOM05D007529 ORTHO05D007451 6.7e-12 75.5 101 44.6
Sp6g38750 Schrenkiella parvula HOM05D005503 ORTHO05D007451 2.5e-11 73.6 250 27.2
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 3.3e-11 73.2 244 25.0
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 3.3e-11 73.2 248 25.4
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 5.6e-11 72.4 244 25.4
FAN17G0844 Fragaria x ananassa HOM05D007529 ORTHO05D007451 5.6e-11 72.4 102 41.2
Thhalv10015674m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 9.6e-11 71.6 247 25.5
BolC8t51531H Brassica oleracea HOM05D005503 ORTHO05D007451 1.1e-09 68.2 160 30.0
Oeu026328.1 Olea europaea HOM05D000056 ORTHO05D000019 1.8e-09 67.4 71 43.7
AT5G03920 Arabidopsis thaliana HOM05D021302 ORTHO05D021386 3.4e-08 63.2 166 27.1
Oeu029713.1 Olea europaea HOM05D007529 ORTHO05D007451 9.9e-08 61.6 66 48.5
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 4.2e-06 56.2 123 35.8
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 4.2e-06 56.2 112 33.0


User provided reference genes

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