Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001618g0070 Nicotiana tabacum HOM05D005255 ORTHO05D006276 6.0e-67 257.3 124 100.0
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 1.3e-64 249.6 124 96.0
Nitab4.5_0000826g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 1.1e-63 246.5 124 96.0
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 9.0e-63 243.4 124 94.4
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 1.3e-61 239.6 124 91.9
PGSC0003DMG400012725 Solanum tuberosum HOM05D005255 ORTHO05D006276 1.3e-61 239.6 124 92.7
Sopen04g008710 Solanum pennellii HOM05D005255 ORTHO05D006276 1.4e-60 236.1 124 91.9
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 4.2e-60 234.6 124 91.9
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 4.2e-60 234.6 124 91.9
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 3.5e-59 231.5 124 90.3
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 1.9e-52 209.1 124 79.8
vmacro09038 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 9.3e-52 206.8 124 79.0
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 3.9e-50 201.4 124 72.6
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 3.9e-50 201.4 124 74.2
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 2.5e-49 198.7 124 72.6
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 5.7e-49 197.6 124 75.0
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 5.7e-49 197.6 124 74.2
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 9.7e-49 196.8 124 77.4
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 2.8e-48 195.3 124 72.6
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 3.7e-48 194.9 124 74.2
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 1.8e-47 192.6 124 75.0
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 2.4e-47 192.2 124 71.8
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 5.3e-47 191.0 122 73.0
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 9.0e-47 190.3 122 73.8
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 1.5e-46 189.5 124 74.2
MSTRG.6398 Avicennia marina HOM05D005255 ORTHO05D006276 2.6e-46 188.7 124 74.2
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 5.9e-46 187.6 124 68.5
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 2.9e-45 185.3 124 71.0
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 2.9e-45 185.3 124 69.4
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 3.8e-45 184.9 122 71.3
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 5.0e-45 184.5 124 73.4
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 8.5e-45 183.7 124 71.8
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 1.4e-44 183.0 124 71.8
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 1.9e-44 182.6 124 68.5
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 1.9e-44 182.6 124 68.5
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 1.9e-44 182.6 124 71.0
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 3.2e-44 181.8 122 69.7
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 4.2e-44 181.4 122 72.1
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 9.4e-44 180.3 123 71.5
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 1.6e-43 179.5 124 70.2
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 2.1e-43 179.1 124 70.2
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 2.1e-43 179.1 124 70.2
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 2.1e-43 179.1 122 69.7
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 4.6e-43 177.9 124 66.9
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 6.1e-43 177.6 122 68.0
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 7.9e-43 177.2 124 66.9
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 7.9e-43 177.2 124 66.9
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 7.9e-43 177.2 123 70.7
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 1.0e-42 176.8 124 65.3
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 1.8e-42 176.0 124 71.0
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 3.9e-42 174.9 123 69.1
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 3.9e-42 174.9 124 69.4
unitig_8.g3497 Utricularia gibba HOM05D005255 ORTHO05D006276 5.1e-42 174.5 123 67.5
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 6.7e-42 174.1 124 66.9
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 1.1e-41 173.3 123 64.2
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 1.1e-41 173.3 124 62.1
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 1.5e-41 172.9 124 66.9
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 2.5e-41 172.2 123 68.3
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 2.5e-41 172.2 122 66.4
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 5.7e-41 171.0 124 63.7
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 5.7e-41 171.0 124 63.7
RcHm_v2.0_Chr3g0484121 Rosa chinensis HOM05D005255 ORTHO05D006276 7.4e-41 170.6 122 65.6
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 1.7e-40 169.5 121 65.3
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 1.7e-40 169.5 124 65.3
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 2.2e-40 169.1 121 63.6
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 2.2e-40 169.1 121 63.6
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 2.2e-40 169.1 124 66.1
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 2.2e-40 169.1 122 69.7
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 2.8e-40 168.7 123 65.0
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 3.7e-40 168.3 121 62.8
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 4.8e-40 167.9 124 65.3
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 8.2e-40 167.2 124 65.3
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 1.1e-39 166.8 121 63.6
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 1.4e-39 166.4 132 62.9
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 1.8e-39 166.0 124 62.9
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 2.4e-39 165.6 121 62.8
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 2.4e-39 165.6 124 65.3
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 6.9e-39 164.1 124 65.3
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 9.1e-39 163.7 121 62.0
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 9.1e-39 163.7 124 63.7
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 1.2e-38 163.3 121 62.0
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 1.2e-38 163.3 121 62.0
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 2.0e-38 162.5 123 64.2
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 2.6e-38 162.2 123 60.2
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 3.4e-38 161.8 121 60.3
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 5.9e-38 161.0 121 66.1
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 1.7e-37 159.5 124 57.3
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 1.7e-37 159.5 122 61.5
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 8.5e-37 157.1 121 57.9
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 1.1e-36 156.8 124 66.1
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 7.2e-36 154.1 122 65.6
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 7.4e-33 144.1 121 56.2
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 1.3e-32 143.3 104 64.4
SEGI_00937 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 1.3e-32 143.3 123 55.3
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 1.7e-32 142.9 122 52.5
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 2.2e-32 142.5 122 51.6
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 1.2e-30 136.7 72 91.7
Ca_20730_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 7.2e-28 127.5 91 67.0
FAN14G4897 Fragaria x ananassa HOM05D005255 ORTHO05D006276 1.6e-27 126.3 133 49.6
Lsat_1_v5_gn_8_83120 Lactuca sativa HOM05D005255 ORTHO05D006276 1.6e-27 126.3 93 62.4
Lsat_1_v5_gn_5_6521 Lactuca sativa HOM05D005255 ORTHO05D006276 6.1e-27 124.4 92 62.0
CAN.G1237.19 Capsicum annuum HOM05D005255 ORTHO05D006276 1.4e-26 123.2 63 92.1
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 4.8e-24 114.8 126 44.4
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 9.4e-20 100.5 124 39.5
TAR624G0532 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.6e-19 99.8 59 72.9
Ca_08424_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 8.3e-16 87.4 78 55.1
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.4e-15 85.9 115 38.3
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.4e-15 85.9 115 38.3
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 5.4e-15 84.7 117 32.5
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 5.0e-13 78.2 53 66.0
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 2.1e-11 72.8 51 64.7
SMO364G0001 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 6.1e-11 71.2 115 29.6
SGA_v2.0_scaffold11G05759 Striga asiatica HOM05D002556 ORTHO05D003153 7.0e-07 57.8 116 29.3
Sed0002753 Sechium edule HOM05D002556 ORTHO05D003153 9.2e-07 57.4 116 28.4
Eucgr.L01602 Eucalyptus grandis HOM05D002556 ORTHO05D003153 1.6e-06 56.6 116 28.4
Thhalv10019982m.g Eutrema salsugineum HOM05D002556 ORTHO05D003153 1.6e-06 56.6 117 27.4
Nitab4.5_0000295g0100 Nicotiana tabacum HOM05D002556 ORTHO05D003153 1.6e-06 56.6 111 30.6
HanXRQChr13g0410841 Helianthus annuus HOM05D002556 ORTHO05D003153 2.7e-06 55.8 116 31.0
ClCG06G005460 Citrullus lanatus HOM05D002556 ORTHO05D003153 3.5e-06 55.5 117 29.1
AT4G03130 Arabidopsis thaliana HOM05D002556 ORTHO05D003153 5.9e-06 54.7 116 30.2
Peaxi162Scf00936g00220 Petunia axillaris HOM05D002556 ORTHO05D003153 7.7e-06 54.3 116 26.7


User provided reference genes

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