Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001616g0090 Nicotiana tabacum HOM05D006037 ORTHO05D007384 0.0e+00 1159.8 580 100.0
Nitab4.5_0005528g0030 Nicotiana tabacum HOM05D006037 ORTHO05D007384 0.0e+00 1112.4 580 95.2
Sopen05g004860 Solanum pennellii HOM05D006037 ORTHO05D007384 2.1e-255 885.6 569 76.6
CAN.G610.57 Capsicum annuum HOM05D006037 ORTHO05D007384 1.7e-249 865.9 574 75.3
Solyc05g009140.3 Solanum lycopersicum HOM05D006037 ORTHO05D007384 6.0e-242 840.9 513 79.9
Peaxi162Scf00753g00122 Petunia axillaris HOM05D006037 ORTHO05D007384 6.0e-234 814.3 501 80.2
Rhsim09G0105100 Rhododendron simsii HOM05D006037 ORTHO05D007384 4.8e-191 671.8 571 59.9
Cc11_g09830 Coffea canephora HOM05D006037 ORTHO05D007384 4.1e-190 668.7 581 58.7
CSS0045711 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 1.2e-189 667.2 561 60.1
CSS0026176 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 1.7e-188 663.3 561 59.9
SalBow8G4457 Salvia bowleyana HOM05D006037 ORTHO05D007384 5.3e-182 641.7 566 58.7
MSTRG.7652 Avicennia marina HOM05D006037 ORTHO05D007384 9.1e-182 641.0 515 63.3
SalBow8G2496 Salvia bowleyana HOM05D006037 ORTHO05D007384 1.5e-181 640.2 566 58.7
Aqoxy3G00235 Aquilegia oxysepala HOM05D006037 ORTHO05D007384 2.0e-181 639.8 582 57.2
SGA_v2.0_scaffold38G14964 Striga asiatica HOM05D006037 ORTHO05D000229 2.0e-181 639.8 575 56.9
Actinidia14911 Actinidia chinensis HOM05D006037 ORTHO05D007384 4.5e-181 638.6 579 57.0
GSVIVG01011862001 Vitis vinifera HOM05D006037 ORTHO05D007384 7.7e-181 637.9 512 62.3
TAR622G1007 Trochodendron aralioides HOM05D006037 ORTHO05D007384 2.9e-180 636.0 560 57.7
DCAR_007255 Daucus carota HOM05D006037 ORTHO05D007384 6.5e-180 634.8 572 56.3
CiPaw.05G240100 Carya illinoinensis HOM05D006037 ORTHO05D007384 1.1e-179 634.0 572 57.9
vmacro10580 Vaccinium macrocarpon HOM05D006037 ORTHO05D007384 6.1e-178 628.2 633 53.7
Lj5g0002773 Lotus japonicus HOM05D006037 ORTHO05D007384 2.3e-177 626.3 514 61.5
MD16G1039700 Malus domestica HOM05D006037 ORTHO05D007384 5.1e-177 625.2 558 56.8
HanXRQChr17g0551931 Helianthus annuus HOM05D006037 ORTHO05D007384 1.5e-176 623.6 512 61.9
RcHm_v2.0_Chr4g0434781 Rosa chinensis HOM05D006037 ORTHO05D007384 3.3e-176 622.5 512 60.2
ECA246G3707 Erigeron canadensis HOM05D006037 ORTHO05D007384 5.7e-176 621.7 558 56.6
FAN12G3404 Fragaria x ananassa HOM05D006037 ORTHO05D007384 6.3e-175 618.2 559 56.0
Ciclev10014910m.g Citrus clementina HOM05D006037 ORTHO05D007384 3.1e-174 615.9 579 55.4
Psat6g225720 Pisum sativum HOM05D006037 ORTHO05D007384 3.1e-174 615.9 514 61.1
Lsat_1_v5_gn_3_57741 Lactuca sativa HOM05D006037 ORTHO05D007384 9.1e-174 614.4 538 57.4
arahy.Tifrunner.gnm1.ann1.NA36PT Arachis hypogaea HOM05D006037 ORTHO05D007384 2.6e-173 612.8 574 54.7
Lalb_Chr06g0165941 Lupinus albus HOM05D006037 ORTHO05D007384 7.7e-173 611.3 513 60.4
arahy.Tifrunner.gnm1.ann1.CBB0MY Arachis hypogaea HOM05D006037 ORTHO05D007384 1.3e-172 610.5 574 54.7
Potri.010G122000 Populus trichocarpa HOM05D006037 ORTHO05D007384 1.3e-172 610.5 514 60.3
Duzib248G1272 Durio zibethinus HOM05D006037 ORTHO05D007384 2.2e-172 609.8 568 54.6
FvH4_4g26975 Fragaria vesca HOM05D006037 ORTHO05D007384 2.2e-172 609.8 559 55.5
Medtr1g110300 Medicago truncatula HOM05D006037 ORTHO05D007384 2.9e-172 609.4 566 56.0
TPR.G4859 Trifolium pratense HOM05D006037 ORTHO05D007384 6.5e-172 608.2 513 59.5
Potri.010G122100 Populus trichocarpa HOM05D006037 ORTHO05D007384 1.4e-171 607.1 572 54.9
Manes.14G105200 Manihot esculenta HOM05D006037 ORTHO05D007384 3.2e-171 605.9 512 58.2
PGSC0003DMG401014554 Solanum tuberosum HOM05D006037 ORTHO05D007384 3.2e-171 605.9 383 77.5
Prupe.1G314400 Prunus persica HOM05D006037 ORTHO05D007384 5.5e-171 605.1 513 58.1
Nn3g17908 Nelumbo nucifera HOM05D006037 ORTHO05D007384 1.2e-170 604.0 570 53.0
Thecc.02G224800 Theobroma cacao HOM05D006037 ORTHO05D007384 1.2e-170 604.0 510 59.0
Sabra10G0092100 Salix brachista HOM05D006037 ORTHO05D007384 2.7e-170 602.8 530 58.7
Atru.chr11.165 Acer truncatum HOM05D006037 ORTHO05D007384 3.6e-170 602.4 499 62.1
Gohir.A03G147800 Gossypium hirsutum HOM05D006037 ORTHO05D007384 1.8e-169 600.1 510 59.2
Haze_00627 Corylus avellana HOM05D006037 ORTHO05D007384 3.0e-169 599.4 561 56.3
Gorai.005G192200 Gossypium raimondii HOM05D006037 ORTHO05D007384 3.0e-169 599.4 571 55.0
Eucgr.B02995 Eucalyptus grandis HOM05D006037 ORTHO05D007384 5.7e-168 595.1 514 57.6
Gohir.D02G171000 Gossypium hirsutum HOM05D006037 ORTHO05D007384 9.7e-168 594.3 510 59.0
CANSAT01G2894 Cannabis sativa HOM05D006037 ORTHO05D007384 1.3e-167 594.0 577 53.4
Migut.L01043 Erythranthe guttata HOM05D006037 ORTHO05D007384 1.3e-167 594.0 518 60.6
Sabra10G0092200 Salix brachista HOM05D006037 ORTHO05D007384 3.7e-167 592.4 572 53.8
unitig_747.g21203 Utricularia gibba HOM05D006037 ORTHO05D007384 3.7e-167 592.4 570 56.0
FAN22G1751 Fragaria x ananassa HOM05D006037 ORTHO05D007384 1.4e-166 590.5 592 53.0
MD13G1039000 Malus domestica HOM05D006037 ORTHO05D007384 4.1e-166 589.0 494 58.5
PGR102G0142 Punica granatum HOM05D006037 ORTHO05D007384 9.1e-166 587.8 557 54.6
Glyma.20G118000 Glycine max HOM05D006037 ORTHO05D007384 2.2e-164 583.2 517 57.4
EL10Ac6g14338 Beta vulgaris HOM05D006037 ORTHO05D007384 1.5e-163 580.5 574 54.0
MBI09_g07743_MAGBIO Magnolia biondii HOM05D006037 ORTHO05D007384 1.5e-163 580.5 559 53.0
PSO017G5347 Papaver somniferum HOM05D006037 ORTHO05D007384 7.2e-163 578.2 581 51.6
PSO478G0980 Papaver somniferum HOM05D006037 ORTHO05D007384 1.0e-161 574.3 581 51.6
COL.COLO4_38215 Corchorus olitorius HOM05D006037 ORTHO05D007384 5.2e-161 572.0 497 57.1
Phvul.007G029700 Phaseolus vulgaris HOM05D006037 ORTHO05D007384 6.8e-161 571.6 516 55.0
Ca_11141_v3 Cicer arietinum L. HOM05D006037 ORTHO05D007384 8.3e-159 564.7 513 55.9
Ca_11146_v3 Cicer arietinum L. HOM05D006037 ORTHO05D007384 8.3e-159 564.7 513 55.9
VMungo0720G2449 Vigna mungo HOM05D006037 ORTHO05D007384 1.4e-158 563.9 500 57.0
THA.LOC104821921 Tarenaya hassleriana HOM05D006037 ORTHO05D007384 1.2e-157 560.8 574 52.4
TAR622G1402 Trochodendron aralioides HOM05D006037 ORTHO05D007384 4.5e-157 558.9 458 60.7
AUR62037303 Chenopodium quinoa HOM05D006037 ORTHO05D007384 5.5e-155 552.0 512 56.4
Thhalv10007371m.g Eutrema salsugineum HOM05D006037 ORTHO05D007384 8.0e-154 548.1 542 51.8
AUR62002838 Chenopodium quinoa HOM05D006037 ORTHO05D007384 6.8e-153 545.0 512 55.5
Aa31LG7G9120 Aethionema arabicum HOM05D006037 ORTHO05D007384 1.5e-152 543.9 570 50.0
Lj3C1012T17 Lonicera japonica HOM05D006037 ORTHO05D007384 1.1e-150 537.7 576 51.2
BolC5t31246H Brassica oleracea HOM05D006037 ORTHO05D007384 1.0e-148 531.2 572 49.1
Zm00001eb125200 Zea mays HOM05D006037 ORTHO05D007384 2.9e-148 529.6 579 48.9
AUR62037301 Chenopodium quinoa HOM05D006037 ORTHO05D007384 5.0e-148 528.9 685 44.8
AL1G39950 Arabidopsis lyrata HOM05D006037 ORTHO05D007384 1.1e-147 527.7 571 48.7
Carub.0001s2514 Capsella rubella HOM05D006037 ORTHO05D007384 1.5e-147 527.3 571 50.3
AT1G25375 Arabidopsis thaliana HOM05D006037 ORTHO05D007384 2.5e-147 526.6 571 48.9
A09p39240 Brassica napus HOM05D006037 ORTHO05D007384 2.5e-147 526.6 572 49.1
BraA09t39423Z Brassica rapa HOM05D006037 ORTHO05D007384 2.5e-147 526.6 572 49.1
BcaC05g26674 Brassica carinata HOM05D006037 ORTHO05D007384 1.2e-146 524.2 574 48.6
AUR62002836 Chenopodium quinoa HOM05D006037 ORTHO05D007384 1.2e-146 524.2 561 50.4
C05p25140 Brassica napus HOM05D006037 ORTHO05D007384 6.1e-146 521.9 572 49.0
CDE12G0065 Ceratophyllum demersum HOM05D006037 ORTHO05D007384 1.0e-145 521.2 502 52.4
ATR1125G090 Amborella trichopoda HOM05D006037 ORTHO05D007384 2.7e-141 506.5 513 52.6
TWI31G0909 Tripterygium wilfordii HOM05D006037 ORTHO05D007384 1.3e-140 504.2 567 49.4
Os01g0133500 Oryza sativa ssp. japonica HOM05D006037 ORTHO05D007384 1.9e-139 500.4 520 50.2
Cpa.g.sc65.52 Carica papaya HOM05D006037 ORTHO05D007384 6.1e-138 495.4 560 45.5
Sc11g0003550 Simmondsia chinensis HOM05D006037 ORTHO05D007384 5.6e-131 472.2 401 58.6
Aa31LG7G9130 Aethionema arabicum HOM05D006037 ORTHO05D007384 4.1e-126 456.1 465 50.3
BcaC05g26470 Brassica carinata HOM05D006037 ORTHO05D007384 7.1e-126 455.3 495 49.7
Dinv21054 Davidia involucrata HOM05D006037 ORTHO05D007384 3.8e-111 406.4 358 59.2
Mapoly0042s0034 Marchantia polymorpha HOM05D006037 ORTHO05D007384 1.8e-97 360.9 523 39.4
CARHR026110 Cardamine hirsuta HOM05D006037 ORTHO05D007384 2.7e-93 347.1 387 49.4
Pp3c15_25940 Physcomitrium patens HOM05D006037 ORTHO05D007384 1.8e-92 344.4 522 37.2
AagrBONN_evm.TU.Sc2ySwM_117.146 Anthoceros agrestis HOM05D006037 ORTHO05D007384 8.1e-90 335.5 520 38.1
QL01p040434 Quercus lobata HOM05D006037 ORTHO05D007384 6.9e-89 332.4 339 54.9
RcHm_v2.0_Chr7g0243441 Rosa chinensis HOM05D006037 ORTHO05D007384 7.9e-85 318.9 277 58.5
RcHm_v2.0_Chr5g0042931 Rosa chinensis HOM05D006037 ORTHO05D007384 5.1e-84 316.2 277 58.1
FAN07G1837 Fragaria x ananassa HOM05D006037 ORTHO05D007384 3.7e-82 310.1 328 50.3
RcHm_v2.0_Chr6g0261541 Rosa chinensis HOM05D006037 ORTHO05D007384 2.0e-80 304.3 266 58.3
SMO164G0020 Selaginella moellendorffii HOM05D006037 ORTHO05D007384 2.6e-80 303.9 292 49.0
HPP92_008271 Vanilla planifolia HOM05D006037 ORTHO05D007384 2.5e-78 297.4 220 59.5
Ah.02g127690 Amaranthus hybridus HOM05D006037 ORTHO05D007384 9.7e-75 285.4 563 34.6
QL01p040421 Quercus lobata HOM05D006037 ORTHO05D007384 2.2e-74 284.3 321 48.0
BcaC05g26471 Brassica carinata HOM05D006037 ORTHO05D007384 2.2e-66 257.7 294 46.9
CBR_g162 Chara braunii HOM05D006037 ORTHO05D007384 6.3e-58 229.6 370 37.8
Hma1.2p1_1024F.1_g249230 Hydrangea macrophylla HOM05D006037 ORTHO05D007384 2.8e-42 177.6 348 35.1
QL02p008150 Quercus lobata HOM05D006037 ORTHO05D007384 2.8e-42 177.6 234 47.4
Hma1.2p1_1024F.1_g249220 Hydrangea macrophylla HOM05D006037 ORTHO05D007384 4.0e-36 157.1 86 81.4
QL02p008285 Quercus lobata HOM05D000178 ORTHO05D007384 2.0e-35 154.8 182 45.1
Oeu054976.1 Olea europaea HOM05D006037 ORTHO05D007384 8.0e-29 132.9 75 78.7
QL02p008246 Quercus lobata HOM05D006037 ORTHO05D007384 8.9e-20 102.8 93 58.1
SEGI_36031 Sequoiadendron giganteum HOM05D006037 ORTHO05D007384 2.4e-17 94.7 118 44.1
CSS0019302 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 3.0e-15 87.8 53 75.5
SEGI_35277 Sequoiadendron giganteum HOM05D006037 ORTHO05D007384 3.0e-15 87.8 111 41.4
CSS0004694 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 3.9e-15 87.4 53 73.6
HPP92_008272 Vanilla planifolia HOM05D006037 ORTHO05D007384 3.3e-14 84.3 101 41.6
CSS0047987 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 5.6e-14 83.6 53 75.5
CSS0027478 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 7.3e-14 83.2 53 71.7
CSS0028236 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 7.3e-14 83.2 53 71.7
RcHm_v2.0_Chr2g0108931 Rosa chinensis HOM05D006037 ORTHO05D007384 8.1e-13 79.7 76 53.9
QL02p008273 Quercus lobata HOM05D006037 ORTHO05D007384 1.2e-11 75.9 39 84.6
Lsat_1_v5_gn_7_98681 Lactuca sativa HOM05D006037 ORTHO05D007384 5.8e-11 73.6 75 50.7
SEGI_25624 Sequoiadendron giganteum HOM05D006037 ORTHO05D007384 3.7e-10 70.9 132 31.8
PRCOL_00006080 Prasinoderma coloniale HOM05D002042 ORTHO05D003928 1.3e-07 62.4 127 33.1
ECA247G1102 Erigeron canadensis HOM05D003337 ORTHO05D003808 2.3e-07 61.6 54 59.3
CSS0043972 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 7.3e-06 56.6 53 56.6


User provided reference genes

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