Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001611g0150 Nicotiana tabacum HOM05D006182 ORTHO05D007236 0.0e+00 2548.1 1247 100.0
Nitab4.5_0003237g0020 Nicotiana tabacum HOM05D006182 ORTHO05D007236 0.0e+00 2045.4 1253 83.5
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 0.0e+00 1711.0 1249 70.6
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 0.0e+00 1649.8 1255 69.6
Peaxi162Scf00929g00711 Petunia axillaris HOM05D006182 ORTHO05D007236 0.0e+00 1623.2 1237 67.9
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 0.0e+00 1570.1 1264 67.2
Solyc07g021120.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 0.0e+00 1393.3 1139 66.5
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 0.0e+00 1385.2 1259 61.7
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 0.0e+00 1313.5 1031 68.3
Dinv35991 Davidia involucrata HOM05D006182 ORTHO05D007236 1.2e-247 860.9 1311 40.0
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 1.0e-243 847.8 1291 39.5
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 2.0e-226 790.4 1297 38.2
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 2.7e-223 780.0 1255 39.2
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 1.2e-218 764.6 1291 37.6
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 7.6e-218 761.9 1279 38.5
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 1.7e-214 750.7 1281 36.2
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 3.1e-211 740.0 1295 37.0
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 6.9e-211 738.8 1298 36.8
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 1.1e-208 731.5 1295 37.2
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 1.2e-207 728.0 1312 35.6
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 2.1e-207 727.2 1279 36.8
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 1.4e-203 714.5 1292 35.7
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 6.9e-203 712.2 1276 37.3
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 2.9e-201 706.8 1302 35.6
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 1.2e-199 701.4 1314 35.8
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 2.8e-196 690.3 1301 36.6
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 5.5e-192 676.0 1303 35.8
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.6e-191 674.5 1297 35.5
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 1.6e-191 674.5 1288 35.8
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 2.7e-191 673.7 1301 35.6
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 5.1e-190 669.5 1313 35.7
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 3.7e-188 663.3 1286 35.0
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 8.2e-188 662.1 1275 34.7
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 6.9e-187 659.1 1296 35.3
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 2.9e-185 653.7 1302 34.9
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 1.0e-182 645.2 1300 34.9
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 3.9e-182 643.3 1326 34.8
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 1.9e-181 641.0 1304 34.7
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 4.8e-172 609.8 1263 34.5
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 6.5e-169 599.4 1291 33.2
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 2.3e-166 590.9 1212 33.6
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 8.8e-166 589.0 1266 32.6
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 5.7e-165 586.3 1217 32.2
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 2.4e-163 580.9 1294 32.8
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 5.0e-161 573.2 1318 32.4
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 1.5e-160 571.6 1216 33.5
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 1.6e-159 568.2 1336 31.7
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 1.6e-159 568.2 1213 33.0
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 3.6e-159 567.0 1162 32.7
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 1.2e-157 562.0 1303 32.8
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 1.2e-157 562.0 1317 32.6
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 2.0e-157 561.2 1303 32.7
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 1.8e-155 554.7 1305 33.2
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 8.5e-153 545.8 1285 32.5
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 1.4e-150 538.5 1230 32.3
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 9.8e-149 532.3 1285 32.3
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 1.0e-145 522.3 1317 31.3
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 5.7e-141 506.5 1285 31.6
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 2.4e-139 501.1 1292 30.0
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 4.1e-139 500.4 1187 32.3
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 4.1e-139 500.4 1300 30.4
AT4G09680 Arabidopsis thaliana HOM05D006182 ORTHO05D007236 7.0e-139 499.6 1293 30.6
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 7.5e-133 479.6 1176 32.1
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 2.0e-130 471.5 1190 31.6
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 1.1e-128 465.7 1255 29.9
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 1.5e-128 465.3 1255 29.9
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 1.5e-128 465.3 1255 29.9
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 6.2e-127 459.9 1189 30.5
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 3.1e-126 457.6 1190 30.6
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 6.8e-126 456.4 1247 30.2
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 1.2e-125 455.7 1248 30.0
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 2.6e-125 454.5 1295 29.3
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 5.8e-125 453.4 1185 30.3
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 8.3e-124 449.5 1191 31.2
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 5.0e-121 440.3 1290 29.8
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 5.0e-121 440.3 1144 30.7
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 5.1e-105 387.1 1207 28.4
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 9.6e-104 382.9 1248 27.3
Oeu032242.1 Olea europaea HOM05D006182 ORTHO05D007236 8.1e-103 379.8 461 45.6
Migut.C00612 Erythranthe guttata HOM05D006182 ORTHO05D007236 2.4e-102 378.3 1286 27.0
unitig_8.g5014 Utricularia gibba HOM05D006182 ORTHO05D007236 9.0e-102 376.3 810 32.7
Oeu033637.2 Olea europaea HOM05D006182 ORTHO05D007236 7.1e-91 340.1 663 33.2
Cpa.g.c37201 Carica papaya HOM05D006182 ORTHO05D007236 1.1e-88 332.8 403 44.9
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 3.4e-85 321.2 755 30.3
Ciclev10003312m.g Citrus clementina HOM05D006182 ORTHO05D007236 9.9e-85 319.7 768 31.4
Lalb_Chr04g0264231 Lupinus albus HOM05D006182 ORTHO05D007236 1.1e-83 316.2 493 39.8
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 7.9e-82 310.1 845 29.1
Sc15g0006450 Simmondsia chinensis HOM05D006182 ORTHO05D007236 2.4e-78 298.5 799 29.7
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 7.6e-77 293.5 944 27.8
Ciclev10003565m.g Citrus clementina HOM05D006182 ORTHO05D007236 1.9e-75 288.9 368 44.6
HPP92_010557 Vanilla planifolia HOM05D006182 ORTHO05D007236 5.5e-75 287.3 813 29.0
Hma1.2p1_2764F.1_g328150 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 3.5e-74 284.6 363 44.4
Sc15g0006460 Simmondsia chinensis HOM05D006182 ORTHO05D007236 3.5e-74 284.6 409 38.4
Cpa.g.sc376.1 Carica papaya HOM05D006182 ORTHO05D007236 1.3e-73 282.7 664 31.5
FAN10G2690 Fragaria x ananassa HOM05D006182 ORTHO05D007236 6.7e-73 280.4 399 41.9
FAN16G1533 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.8e-68 264.6 399 39.8
FAN19G3122 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.9e-59 235.7 242 48.8
FAN17G1630 Fragaria x ananassa HOM05D006182 ORTHO05D007236 7.9e-58 230.3 237 48.5
Eucgr.F02378 Eucalyptus grandis HOM05D006182 ORTHO05D007236 1.1e-56 226.5 364 36.0
TWI36G0305 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 1.3e-55 223.0 400 36.2
Os09g0376000 Oryza sativa ssp. japonica HOM05D006182 ORTHO05D007236 1.3e-52 213.0 496 33.1
FAN19G0764 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.1e-46 193.4 204 48.0
CDE02G1449 Ceratophyllum demersum HOM05D006182 ORTHO05D007236 1.6e-37 162.9 353 30.9
Pp3c12_3560 Physcomitrium patens HOM05D006182 ORTHO05D007236 3.8e-36 158.3 1274 21.2
Lalb_Chr04g0264191 Lupinus albus HOM05D006182 ORTHO05D007236 1.6e-34 152.9 414 31.9
VMungo1127G0903 Vigna mungo HOM05D006182 ORTHO05D007236 3.0e-33 148.7 217 41.0
Mapoly0037s0065 Marchantia polymorpha HOM05D006182 ORTHO05D007236 3.5e-29 135.2 471 27.4
SEGI_31096 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 7.2e-27 127.5 714 23.0
CARHR260630 Cardamine hirsuta HOM05D006182 ORTHO05D007236 9.5e-27 127.1 620 24.4
Lalb_Chr04g0264211 Lupinus albus HOM05D006182 ORTHO05D007236 2.4e-22 112.5 154 37.0
GSVIVG01009572001 Vitis vinifera HOM05D006182 ORTHO05D007236 4.7e-18 98.2 178 40.4
SMO356G0287 Selaginella moellendorffii HOM05D006182 ORTHO05D007236 1.8e-17 96.3 610 22.3
SEGI_35767 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 2.6e-16 92.4 198 31.8
Dinv00354 Davidia involucrata HOM05D006182 ORTHO05D007236 1.3e-12 80.1 57 63.2
Dinv35387 Davidia involucrata HOM05D013161 ORTHO05D007236 8.0e-10 70.9 51 62.7
SHI08237 Sapria himalayana HOM05D006182 ORTHO05D007236 8.0e-10 70.9 160 26.9


User provided reference genes

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