Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001611g0140 Nicotiana tabacum HOM05D006182 ORTHO05D007236 2.6e-115 418.7 210 100.0
Nitab4.5_0003237g0010 Nicotiana tabacum HOM05D006182 ORTHO05D007236 4.7e-104 381.3 202 95.5
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 3.7e-85 318.5 210 77.1
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 3.3e-81 305.4 210 76.2
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 2.0e-78 296.2 210 73.8
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 2.6e-78 295.8 210 73.8
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 3.4e-78 295.4 210 73.8
Oeu033637.2 Olea europaea HOM05D006182 ORTHO05D007236 2.0e-46 189.9 207 52.2
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 3.7e-40 169.1 206 46.1
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 1.8e-39 166.8 210 46.7
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 6.9e-39 164.9 210 43.3
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 2.6e-38 162.9 206 44.2
GSVIVG01009571001 Vitis vinifera HOM05D006182 ORTHO05D007236 1.3e-37 160.6 207 42.0
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 2.9e-37 159.5 210 42.4
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 3.8e-37 159.1 208 43.8
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 4.9e-37 158.7 209 42.6
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 1.9e-36 156.8 206 43.2
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 2.5e-36 156.4 211 43.1
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 3.2e-36 156.0 207 39.1
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 2.1e-35 153.3 210 41.9
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 2.7e-35 152.9 208 42.3
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.5e-35 152.5 210 41.9
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 3.5e-35 152.5 210 40.5
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.0e-34 151.0 200 43.0
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 1.3e-34 150.6 206 43.2
Sc15g0006450 Simmondsia chinensis HOM05D006182 ORTHO05D007236 1.1e-33 147.5 205 41.0
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 1.9e-33 146.7 209 43.5
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 2.5e-33 146.4 205 39.5
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 9.6e-33 144.4 207 39.6
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 3.7e-32 142.5 205 41.0
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 1.1e-31 141.0 205 40.0
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 1.4e-31 140.6 212 42.0
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 1.4e-31 140.6 165 47.9
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 1.8e-31 140.2 209 42.6
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 9.0e-31 137.9 204 40.2
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 7.6e-30 134.8 206 37.9
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 1.0e-29 134.4 204 40.2
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 1.3e-29 134.0 205 40.5
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 2.2e-29 133.3 214 36.0
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 5.0e-29 132.1 204 36.8
Migut.C00612 Erythranthe guttata HOM05D006182 ORTHO05D007236 6.5e-29 131.7 207 39.1
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 1.4e-28 130.6 210 40.0
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 3.2e-28 129.4 212 40.1
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 3.2e-28 129.4 214 41.6
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 5.5e-28 128.6 210 39.5
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 5.5e-28 128.6 210 39.5
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 7.1e-28 128.3 217 40.6
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 2.1e-27 126.7 178 41.0
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 2.1e-27 126.7 210 38.6
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 2.7e-27 126.3 209 37.3
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 2.7e-27 126.3 209 39.2
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 4.6e-27 125.6 209 38.3
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 6.1e-27 125.2 207 36.2
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 6.7e-26 121.7 209 37.8
Solyc07g021115.1 Solanum lycopersicum HOM05D006182 ORTHO05D007236 2.5e-25 119.8 78 76.9
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 4.3e-25 119.0 211 37.4
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 9.7e-25 117.9 209 36.8
Lalb_Chr04g0264181 Lupinus albus HOM05D006182 ORTHO05D007236 2.8e-24 116.3 210 34.8
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 1.1e-23 114.4 209 36.8
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 1.1e-23 114.4 202 35.1
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 4.1e-23 112.5 207 35.7
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 1.2e-22 110.9 208 33.7
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 4.5e-22 109.0 209 36.4
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 2.9e-21 106.3 213 36.6
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 2.9e-21 106.3 207 35.7
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 5.5e-20 102.1 200 34.5
unitig_8.g5014 Utricularia gibba HOM05D006182 ORTHO05D007236 5.5e-20 102.1 207 34.3
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 7.2e-20 101.7 212 31.1
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 1.2e-19 100.9 179 33.5
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 2.7e-19 99.8 209 33.5
HPP92_010556 Vanilla planifolia HOM05D006182 ORTHO05D007236 3.9e-18 95.9 205 30.7
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 5.1e-18 95.5 210 31.0
SHI08237 Sapria himalayana HOM05D006182 ORTHO05D007236 6.7e-18 95.1 220 32.3
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 2.0e-17 93.6 210 31.0
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 2.0e-17 93.6 210 32.9
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 3.7e-16 89.4 209 29.7
Ca_05108_v3 Cicer arietinum L. HOM05D006182 ORTHO05D007236 3.7e-16 89.4 169 33.1
Ciclev10003312m.g Citrus clementina HOM05D006182 ORTHO05D007236 3.7e-16 89.4 129 41.9
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 4.8e-16 89.0 209 29.7
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 8.2e-16 88.2 147 38.1
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 1.8e-15 87.0 209 28.7
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 1.8e-15 87.0 209 28.7
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 1.8e-15 87.0 210 29.5
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 6.9e-15 85.1 208 27.9
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 6.9e-15 85.1 201 31.8
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 4.5e-14 82.4 206 28.2
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 4.5e-14 82.4 151 35.8
Peaxi162Scf00929g00711 Petunia axillaris HOM05D006182 ORTHO05D007236 4.5e-14 82.4 65 67.7
CDE02G1449 Ceratophyllum demersum HOM05D006182 ORTHO05D007236 2.2e-13 80.1 120 37.5
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 1.9e-12 77.0 206 28.2
SEGI_19792 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 1.8e-07 60.5 167 30.5
unitig_19.g30006 Utricularia gibba HOM05D006182 ORTHO05D007236 3.1e-07 59.7 120 33.3
MBI16_g32432_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 5.3e-07 58.9 62 43.5
Psat2g076400 Pisum sativum HOM05D002050 ORTHO05D001949 7.7e-06 55.1 82 41.5


User provided reference genes

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