Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 0.0e+00 1229.2 679 100.0
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 2.1e-262 909.1 688 77.8
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 8.5e-248 860.5 700 73.0
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 2.3e-237 825.9 701 70.5
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 4.4e-236 821.6 704 70.3
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 2.6e-228 795.8 680 71.8
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 7.0e-210 734.6 692 65.9
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.1e-58 232.3 728 32.6
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 9.0e-56 222.6 402 40.8
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 3.2e-53 214.2 438 44.1
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 1.8e-51 208.4 571 35.7
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 3.9e-51 207.2 298 47.0
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 1.5e-50 205.3 461 38.0
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 3.3e-50 204.1 292 49.3
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 4.8e-49 200.3 382 43.5
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 6.3e-49 199.9 664 35.2
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 1.1e-48 199.1 406 37.9
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 3.1e-48 197.6 580 35.0
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 1.2e-47 195.7 654 35.2
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 2.0e-47 194.9 388 42.3
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 3.4e-47 194.1 568 37.1
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 1.0e-46 192.6 529 36.1
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 2.2e-46 191.4 462 40.3
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 3.8e-46 190.7 498 36.1
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 9.3e-45 186.0 570 36.5
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 2.7e-44 184.5 580 36.2
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 6.1e-44 183.3 255 48.2
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 3.0e-43 181.0 557 32.5
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 5.1e-43 180.3 477 35.0
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 8.7e-43 179.5 304 43.8
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 1.9e-42 178.3 579 34.2
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 3.3e-42 177.6 382 36.6
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 7.4e-42 176.4 671 29.2
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 9.7e-42 176.0 480 34.4
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 2.2e-41 174.9 417 37.9
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.8e-41 173.7 424 41.0
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 4.8e-41 173.7 446 37.2
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 8.2e-41 172.9 426 38.3
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.1e-40 172.6 574 32.8
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.4e-40 172.2 224 48.7
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.8e-40 171.8 409 37.4
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 1.8e-40 171.8 723 31.1
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 2.4e-40 171.4 466 33.5
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.2e-39 169.1 442 39.8
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 3.4e-39 167.5 669 28.7
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 5.9e-39 166.8 430 35.1
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 7.7e-39 166.4 537 33.0
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.2e-38 164.9 415 41.0
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 3.8e-38 164.1 442 39.4
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 6.5e-38 163.3 719 30.3
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 3.2e-37 161.0 407 36.4
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 5.5e-37 160.2 503 32.8
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 9.4e-37 159.5 642 33.2
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 1.2e-36 159.1 401 34.9
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.2e-36 159.1 233 44.2
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 4.6e-36 157.1 232 45.7
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 6.1e-36 156.8 531 32.4
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 1.8e-35 155.2 486 34.4
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 1.8e-35 155.2 194 52.1
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 2.3e-35 154.8 468 32.3
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 2.0e-34 151.8 551 34.1
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 3.3e-34 151.0 485 32.6
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 7.4e-34 149.8 449 32.7
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 7.4e-34 149.8 567 31.9
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 1.7e-33 148.7 427 34.9
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 8.2e-33 146.4 612 31.7
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 8.2e-33 146.4 480 32.5
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 1.8e-32 145.2 358 42.2
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 3.1e-32 144.4 687 29.4
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 5.3e-32 143.7 435 31.0
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 6.9e-32 143.3 650 30.9
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.2e-31 142.5 463 32.6
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 5.9e-31 140.2 411 33.6
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 1.0e-30 139.4 372 36.0
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.3e-30 139.0 468 33.1
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 2.9e-30 137.9 381 33.6
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 2.9e-30 137.9 466 32.4
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 2.9e-30 137.9 586 30.2
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 3.8e-30 137.5 505 31.9
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 3.8e-30 137.5 301 37.5
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.9e-29 135.2 370 35.4
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 3.2e-29 134.4 401 35.4
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 7.2e-29 133.3 425 33.2
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 7.2e-29 133.3 244 36.9
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 2.7e-28 131.3 471 33.8
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 6.1e-28 130.2 264 39.0
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 1.4e-27 129.0 434 31.1
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 3.9e-27 127.5 480 31.5
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 5.1e-27 127.1 637 28.9
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 5.1e-27 127.1 656 28.4
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 8.8e-27 126.3 359 34.8
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.1e-26 125.9 378 33.3
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.5e-26 125.6 257 35.0
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 3.3e-26 124.4 473 33.6
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 4.8e-25 120.6 243 35.8
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 2.4e-24 118.2 635 28.8
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 4.5e-23 114.0 186 41.4
Oeu051588.1 Olea europaea HOM05D054970 ORTHO05D049444 2.9e-22 111.3 244 37.3
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 3.8e-22 110.9 437 29.7
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.8e-22 110.9 420 34.0
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 2.8e-17 94.7 286 31.8
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 8.2e-17 93.2 529 26.5
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 4.5e-15 87.4 562 25.6
Migut.N01879 Erythranthe guttata HOM05D006718 ORTHO05D008492 9.8e-10 69.7 294 32.3
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 2.8e-09 68.2 393 27.0
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 5.4e-08 63.9 338 26.0
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 2.7e-07 61.6 395 24.8
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 7.7e-07 60.1 447 23.7
Lsat_1_v5_gn_4_139860 Lactuca sativa HOM05D006718 ORTHO05D008492 5.0e-06 57.4 149 32.2


User provided reference genes

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