Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001611g0070 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.3e-123 444.1 225 100.0
Nitab4.5_0020090g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.8e-102 375.6 226 86.3
Nitab4.5_0028034g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.0e-101 371.7 236 83.5
Nitab4.5_0000297g0280 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.1e-94 349.4 229 79.0
Nitab4.5_0000506g0250 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.8e-94 349.0 200 87.5
Nitab4.5_0000915g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.4e-90 335.9 218 83.0
Nitab4.5_0002600g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.4e-90 335.9 190 90.5
Nitab4.5_0008299g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.7e-81 305.8 179 88.8
Nitab4.5_0006822g0050 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.7e-73 279.3 183 80.3
Nitab4.5_0003230g0090 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.1e-69 265.8 210 69.0
Nitab4.5_0001614g0210 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.8e-69 264.6 159 87.4
Nitab4.5_0002432g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.2e-68 263.8 236 61.4
Nitab4.5_0000062g0080 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.5e-68 263.5 218 67.4
Nitab4.5_0001796g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 9.9e-60 234.2 188 71.3
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 7.1e-58 228.0 238 51.3
PGSC0003DMG400041016 Solanum tuberosum HOM05D007579 ORTHO05D000285 7.4e-55 218.0 236 50.0
Peaxi162Scf00002g02220 Petunia axillaris HOM05D000876 ORTHO05D000285 2.6e-52 209.5 239 49.4
Peaxi162Scf00593g00324 Petunia axillaris HOM05D007579 ORTHO05D000285 3.2e-50 202.6 237 49.4
Nitab4.5_0012930g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.2e-50 202.2 119 87.4
Nitab4.5_0002356g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 9.3e-50 201.1 224 50.9
Nitab4.5_0005587g0100 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-48 197.2 231 50.2
Nitab4.5_0003708g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.9e-45 184.9 119 82.4
Nitab4.5_0000038g0120 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.0e-44 183.3 184 55.4
Solyc12g039050.3 Solanum lycopersicum HOM05D000876 ORTHO05D000285 3.8e-43 179.1 198 50.5
Nitab4.5_0002414g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.4e-42 177.2 171 59.6
Nitab4.5_0000545g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.8e-38 162.9 92 85.9
Nitab4.5_0000212g0300 Nicotiana tabacum HOM05D007579 ORTHO05D000285 9.0e-37 157.9 167 56.9
Nitab4.5_0002507g0110 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.4e-36 156.0 182 50.5
Nitab4.5_0000287g0210 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.8e-35 152.5 164 54.9
PGSC0003DMG400037326 Solanum tuberosum HOM05D007579 ORTHO05D000285 3.2e-34 149.4 171 50.3
Nitab4.5_0004614g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.6e-33 147.1 182 47.8
Nitab4.5_0014138g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.0e-32 144.4 204 44.1
Peaxi162Scf00174g00006 Petunia axillaris HOM05D007579 ORTHO05D000285 3.0e-32 142.9 157 49.7
Nitab4.5_0003997g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.1e-31 141.0 157 52.9
Nitab4.5_0003606g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.3e-31 139.0 192 47.9
Nitab4.5_0000666g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.8e-30 136.3 140 58.6
Nitab4.5_0012930g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.3e-30 135.2 85 81.2
Nitab4.5_0005324g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.4e-29 134.0 230 43.5
Nitab4.5_0004630g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000037 9.0e-29 131.3 159 49.7
Nitab4.5_0000259g0140 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.4e-28 129.4 126 57.9
Nitab4.5_0002535g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.0e-27 127.9 80 80.0
Nitab4.5_0000391g0290 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.7e-27 127.1 115 59.1
Nitab4.5_0004989g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.7e-27 127.1 125 57.6
Nitab4.5_0007287g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.0e-27 125.6 122 56.6
Nitab4.5_0002668g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.5e-27 125.2 106 63.2
Nitab4.5_0000025g0280 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.1e-26 124.4 91 68.1
Nitab4.5_0000059g0640 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.5e-26 123.2 105 64.8
Peaxi162Scf00024g00024 Petunia axillaris HOM05D007579 ORTHO05D000285 3.2e-26 122.9 171 46.2
Peaxi162Scf00338g00014 Petunia axillaris HOM05D007579 ORTHO05D000285 1.2e-25 120.9 155 49.7
Peaxi162Scf75076g00002 Petunia axillaris HOM05D007579 ORTHO05D000285 1.6e-25 120.6 155 49.7
Nitab4.5_0002060g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.7e-25 119.8 109 60.6
Peaxi162Scf00298g00613 Petunia axillaris HOM05D000034 ORTHO05D000037 2.7e-25 119.8 195 42.6
Nitab4.5_0002588g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.6e-25 119.0 128 50.0
Nitab4.5_0000720g0130 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.1e-24 115.5 130 51.5
Peaxi162Scf00558g00416 Petunia axillaris HOM05D007579 ORTHO05D000285 1.1e-23 114.4 233 32.6
Nitab4.5_0002745g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.0e-23 113.6 118 52.5
Nitab4.5_0002535g0050 Nicotiana tabacum HOM05D007579 ORTHO05D000285 9.7e-23 111.3 77 75.3
Peaxi162Scf00603g00414 Petunia axillaris HOM05D007579 ORTHO05D000285 1.3e-22 110.9 185 41.1
DCAR_020231 Daucus carota HOM05D000876 ORTHO05D000285 4.8e-22 109.0 244 35.2
Nitab4.5_0012419g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.8e-21 107.1 127 45.7
Nitab4.5_0010204g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 9.1e-21 104.8 75 70.7
HanXRQChr14g0461341 Helianthus annuus HOM05D000876 ORTHO05D000285 2.0e-20 103.6 229 33.2
Peaxi162Scf00973g00320 Petunia axillaris HOM05D007579 ORTHO05D000285 3.4e-20 102.8 138 50.0
Nitab4.5_0000072g0060 Nicotiana tabacum HOM05D000876 ORTHO05D000285 4.5e-20 102.4 91 62.6
HanXRQChr05g0143471 Helianthus annuus HOM05D000876 ORTHO05D000285 2.2e-19 100.1 228 32.5
Nitab4.5_0000801g0050 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.2e-19 100.1 95 60.0
CAN.G495.13 Capsicum annuum HOM05D007579 ORTHO05D000285 2.5e-18 96.7 91 53.8
Nitab4.5_0001872g0050 Nicotiana tabacum HOM05D007579 ORTHO05D014074 5.5e-18 95.5 62 75.8
Peaxi162Scf00201g01410 Petunia axillaris HOM05D007579 ORTHO05D000037 1.6e-17 94.0 224 33.0
Lsat_1_v5_gn_5_190881 Lactuca sativa HOM05D009382 ORTHO05D000285 3.6e-17 92.8 234 32.5
Nitab4.5_0004630g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.6e-17 92.8 91 58.2
Nitab4.5_0000072g0050 Nicotiana tabacum HOM05D007579 ORTHO05D014074 6.1e-17 92.0 47 91.5
Nitab4.5_0002588g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.0e-16 91.3 69 62.3
Nitab4.5_0014727g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.8e-16 90.5 70 67.1
Lsat_1_v5_gn_6_85680 Lactuca sativa HOM05D009382 ORTHO05D000285 2.3e-16 90.1 234 32.1
Lsat_1_v5_gn_3_25080 Lactuca sativa HOM05D009382 ORTHO05D000285 3.9e-16 89.4 234 32.1
Lsat_1_v5_gn_9_80960 Lactuca sativa HOM05D009382 ORTHO05D000285 1.1e-15 87.8 234 32.1
Nitab4.5_0001811g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.6e-15 86.7 138 45.7
Nitab4.5_0003679g0080 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.3e-15 86.3 138 40.6
Oeu060831.2 Olea europaea HOM05D000876 ORTHO05D000285 7.4e-15 85.1 283 27.9
Peaxi162Scf00042g02110 Petunia axillaris HOM05D007579 ORTHO05D000285 1.7e-14 84.0 133 40.6
Lsat_1_v5_gn_9_88141 Lactuca sativa HOM05D009382 ORTHO05D000285 6.3e-14 82.0 234 30.3
Lsat_1_v5_gn_3_29260 Lactuca sativa HOM05D009382 ORTHO05D000285 8.2e-14 81.6 236 30.1
Nitab4.5_0000059g0630 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.4e-13 80.1 83 45.8
Nitab4.5_0000545g0010 Nicotiana tabacum HOM05D007579 ORTHO05D014074 5.3e-13 79.0 41 87.8
Lsat_1_v5_gn_2_22181 Lactuca sativa HOM05D009382 ORTHO05D000285 1.2e-12 77.8 232 31.0
Atru.chr11.998 Acer truncatum HOM05D000876 ORTHO05D000285 1.0e-11 74.7 234 27.8
Peaxi162Scf00163g00092 Petunia axillaris HOM05D007579 ORTHO05D000285 1.0e-11 74.7 121 41.3
Nitab4.5_0003500g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000037 1.3e-11 74.3 109 42.2
CANSAT35G0018 Cannabis sativa HOM05D000876 ORTHO05D000285 2.2e-11 73.6 231 24.2
DCAR_031892 Daucus carota HOM05D000876 ORTHO05D000285 2.9e-11 73.2 231 30.3
Nitab4.5_0003708g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.0e-11 72.4 57 68.4
Nitab4.5_0000801g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.5e-11 72.0 56 60.7
Nitab4.5_0003679g0100 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.5e-10 70.9 59 49.2
DCAR_020120 Daucus carota HOM05D000876 ORTHO05D000285 1.9e-10 70.5 244 30.3
Nitab4.5_0000514g0080 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.9e-10 70.5 36 83.3
Lsat_1_v5_gn_5_66420 Lactuca sativa HOM05D009382 ORTHO05D000285 3.2e-10 69.7 239 28.5
CANSAT78G1247 Cannabis sativa HOM05D000876 ORTHO05D000285 4.2e-10 69.3 232 26.7
CAN.G462.3 Capsicum annuum HOM05D000876 ORTHO05D000285 4.2e-10 69.3 70 47.1
arahy.Tifrunner.gnm1.ann1.GG5U8X Arachis hypogaea HOM05D000876 ORTHO05D000285 7.2e-10 68.6 230 26.5
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 7.2e-10 68.6 232 27.6
CSS0033511 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 7.2e-10 68.6 233 28.8
Atru.chr2.2393 Acer truncatum HOM05D000034 ORTHO05D000037 1.2e-09 67.8 234 27.4
CANSAT01G0041 Cannabis sativa HOM05D000876 ORTHO05D000285 1.6e-09 67.4 232 25.4
Nitab4.5_0004668g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.6e-09 67.4 54 61.1
CANSAT56G2973 Cannabis sativa HOM05D000876 ORTHO05D000285 2.1e-09 67.0 232 26.3
DCAR_030787 Daucus carota HOM05D000876 ORTHO05D000285 2.1e-09 67.0 250 27.6
Nitab4.5_0000359g0120 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.7e-09 66.6 78 41.0
Nitab4.5_0000666g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.1e-09 65.5 59 55.9
CSS0021579 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 1.8e-08 63.9 230 27.0
DCAR_025172 Daucus carota HOM05D000876 ORTHO05D000285 2.3e-08 63.5 231 28.1
Lj1g0019277 Lotus japonicus HOM05D000876 ORTHO05D000285 2.3e-08 63.5 239 26.4
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 3.0e-08 63.2 242 27.3
Nitab4.5_0007412g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.0e-08 63.2 68 41.2
CAN.G2500.1 Capsicum annuum HOM05D007579 ORTHO05D000285 1.5e-07 60.8 69 40.6
Ah.03g141330 Amaranthus hybridus HOM05D000876 ORTHO05D000285 2.0e-07 60.5 244 22.1
Ah.10g031690 Amaranthus hybridus HOM05D000034 ORTHO05D000285 2.0e-07 60.5 244 22.1
PSO507G0009 Papaver somniferum HOM05D000876 ORTHO05D000285 2.0e-07 60.5 233 24.9
arahy.Tifrunner.gnm1.ann1.R6BV2D Arachis hypogaea HOM05D000876 ORTHO05D000285 2.6e-07 60.1 232 26.3
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 3.3e-07 59.7 246 27.6
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 3.3e-07 59.7 246 27.6
ECA236G2545 Erigeron canadensis HOM05D009081 ORTHO05D000285 3.3e-07 59.7 265 25.7
Lsat_1_v5_gn_0_5760 Lactuca sativa HOM05D009382 ORTHO05D000285 3.3e-07 59.7 177 31.6
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 4.4e-07 59.3 240 27.1
Glyma.19G101700 Glycine max HOM05D000876 ORTHO05D000285 4.4e-07 59.3 231 26.0
Lsat_1_v5_gn_3_105581 Lactuca sativa HOM05D009382 ORTHO05D000285 4.4e-07 59.3 232 28.4
TWI81G0918 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 5.7e-07 58.9 255 25.1
arahy.Tifrunner.gnm1.ann1.X5RLQI Arachis hypogaea HOM05D000034 ORTHO05D000285 7.5e-07 58.5 228 24.1
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 7.5e-07 58.5 242 26.4
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 7.5e-07 58.5 242 26.9
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 1.3e-06 57.8 229 24.9
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 229 24.9
Hund08681 Selenicereus undatus HOM05D000876 ORTHO05D000285 1.7e-06 57.4 255 22.4
arahy.Tifrunner.gnm1.ann1.7Y6611 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.2e-06 57.0 232 26.3
Peaxi162Scf00435g00116 Petunia axillaris HOM05D007579 ORTHO05D000285 3.7e-06 56.2 80 40.0
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 3.7e-06 56.2 243 25.5
Gorai.008G032400 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.8e-06 55.8 244 24.6


User provided reference genes

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