Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 0.0e+00 1093.6 550 100.0
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.4e-301 1038.9 532 97.9
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 2.4e-285 984.9 536 92.4
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 6.4e-270 933.7 536 86.9
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 6.6e-267 923.7 536 86.0
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 4.5e-263 911.0 536 85.1
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 6.7e-259 897.1 546 81.9
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 3.1e-248 861.7 537 81.4
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 2.6e-247 858.6 539 78.7
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 2.7e-244 848.6 536 79.7
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 1.1e-242 843.2 537 78.4
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 4.5e-239 831.2 530 79.1
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 1.7e-238 829.3 526 78.7
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 5.0e-238 827.8 530 79.1
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 1.9e-237 825.9 537 77.3
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.5e-237 825.5 538 77.9
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 2.7e-236 822.0 529 76.9
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 3.6e-236 821.6 530 77.4
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 1.3e-235 819.7 537 77.7
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 3.0e-235 818.5 521 78.1
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 5.1e-235 817.8 536 76.7
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 5.1e-235 817.8 521 78.7
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 8.2e-233 810.4 537 75.8
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 8.2e-233 810.4 530 77.4
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 1.4e-232 809.7 543 74.8
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 1.8e-232 809.3 536 76.5
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 2.4e-232 808.9 543 74.8
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 2.4e-232 808.9 537 76.2
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 4.1e-232 808.1 530 76.4
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 2.6e-231 805.4 537 75.0
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 3.4e-231 805.1 481 82.3
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 4.5e-231 804.7 523 76.9
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 1.0e-230 803.5 537 74.5
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 1.3e-230 803.1 537 75.2
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 1.7e-230 802.7 518 76.6
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 2.2e-230 802.4 526 77.4
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 2.9e-230 802.0 523 76.9
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.8e-230 801.6 526 76.4
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 8.5e-230 800.4 546 73.4
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.1e-229 800.0 523 76.9
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 1.4e-229 799.7 537 76.0
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.4e-229 799.7 523 76.7
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 1.9e-229 799.3 537 75.4
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 1.9e-229 799.3 537 76.0
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.2e-229 798.5 523 76.7
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 3.2e-229 798.5 535 75.5
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 5.5e-229 797.7 535 75.3
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 7.9e-228 793.9 549 74.1
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 7.9e-228 793.9 542 72.7
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 1.0e-227 793.5 537 74.7
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 1.5e-226 789.6 541 74.7
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.0e-226 789.3 534 75.3
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 2.6e-226 788.9 535 75.0
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 5.7e-226 787.7 534 75.8
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 1.3e-225 786.6 614 67.3
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 1.7e-225 786.2 533 75.2
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 2.2e-225 785.8 534 74.0
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 2.2e-225 785.8 491 78.0
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 8.2e-225 783.9 538 72.5
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 8.2e-225 783.9 492 79.7
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 1.4e-224 783.1 537 73.9
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 1.8e-224 782.7 537 74.1
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 9.1e-224 780.4 548 73.4
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 2.6e-223 778.9 491 77.6
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 4.5e-223 778.1 538 74.0
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 2.9e-222 775.4 539 73.8
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 3.8e-222 775.0 536 73.7
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 5.0e-222 774.6 538 73.8
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 6.5e-222 774.2 499 79.0
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 8.5e-222 773.9 538 73.6
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 1.1e-221 773.5 537 73.2
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 1.4e-221 773.1 536 73.7
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 4.7e-220 768.1 538 73.0
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 6.7e-219 764.2 531 73.3
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 4.8e-217 758.1 537 71.3
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 6.3e-217 757.7 529 72.6
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 8.2e-217 757.3 536 72.6
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 4.1e-216 755.0 545 71.2
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 4.1e-216 755.0 538 71.6
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 5.3e-216 754.6 531 71.9
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 7.0e-216 754.2 511 74.0
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 1.2e-215 753.4 530 72.1
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 1.6e-215 753.1 539 71.4
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 2.0e-215 752.7 536 72.2
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.0e-215 752.7 471 76.9
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 2.6e-215 752.3 463 79.7
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 4.5e-215 751.5 539 71.6
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 5.9e-215 751.1 537 70.4
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 1.3e-214 750.0 538 71.2
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 2.2e-214 749.2 489 76.3
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 1.5e-213 746.5 537 69.8
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 5.5e-213 744.6 537 70.4
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 5.5e-213 744.6 568 68.1
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 1.2e-212 743.4 494 75.3
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 2.1e-212 742.7 538 69.5
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 1.4e-211 740.0 535 71.6
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 3.0e-211 738.8 494 75.1
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 4.0e-211 738.4 527 71.9
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 4.4e-210 734.9 545 69.7
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 1.8e-208 729.6 528 69.9
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 5.3e-208 728.0 541 68.6
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 1.5e-205 719.9 500 73.6
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 1.5e-205 719.9 529 68.2
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 1.5e-205 719.9 529 68.2
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 9.4e-205 717.2 527 69.4
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 4.7e-204 714.9 527 69.3
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 4.7e-204 714.9 527 68.7
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 8.0e-204 714.1 527 69.1
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 4.0e-203 711.8 541 68.6
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 2.2e-201 706.1 549 66.8
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 1.8e-200 703.0 500 72.4
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 7.0e-200 701.0 527 68.3
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 1.2e-199 700.3 404 81.7
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 4.5e-199 698.4 538 66.2
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 5.9e-199 698.0 550 66.9
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 1.2e-196 690.3 536 70.5
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 2.1e-196 689.5 527 68.7
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.0e-187 658.7 550 64.0
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 2.9e-185 652.5 543 63.0
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 6.4e-185 651.4 402 77.1
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 9.2e-184 647.5 539 63.1
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 3.0e-182 642.5 490 67.3
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 1.9e-173 613.2 542 61.3
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 3.4e-170 602.4 488 64.1
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 1.9e-168 596.7 550 58.4
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 2.1e-159 566.6 537 59.6
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 2.8e-156 556.2 508 58.7
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 8.1e-156 554.7 410 69.8
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 1.2e-154 550.8 351 80.1
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 3.4e-154 549.3 543 53.8
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 1.7e-153 547.0 544 54.2
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 4.5e-146 522.3 440 64.3
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 3.3e-141 506.1 560 50.4
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.3e-141 505.8 357 73.1
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.2e-138 497.7 468 56.6
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 2.5e-133 479.9 551 48.3
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 4.9e-129 465.7 387 63.8
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 8.4e-129 464.9 545 49.4
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 8.7e-126 454.9 391 64.5
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 6.5e-105 385.6 306 59.8
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 6.7e-102 375.6 535 41.3
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 6.3e-100 369.0 504 45.0
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 1.6e-95 354.4 388 55.7
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 3.4e-69 266.9 167 83.8
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 4.0e-62 243.4 309 49.5
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 4.1e-59 233.4 460 33.0
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 6.2e-55 219.5 244 52.0
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 1.3e-49 201.8 494 31.8
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 1.1e-48 198.7 415 32.8
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 2.1e-47 194.5 374 37.2
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 7.6e-45 186.0 91 93.4
Glyma.12G171232 Glycine max HOM05D004210 ORTHO05D013328 9.2e-43 179.1 97 84.5
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 6.6e-41 172.9 113 77.9
Dinv18721 Davidia involucrata HOM05D004210 ORTHO05D005017 1.1e-40 172.2 155 60.0
Aa31LG8G7760 Aethionema arabicum HOM05D004210 ORTHO05D005017 3.6e-39 167.2 156 57.1
VMungo1127G1364 Vigna mungo HOM05D004210 ORTHO05D005017 5.8e-37 159.8 169 50.3
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 1.9e-35 154.8 418 30.1
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 2.5e-32 144.4 146 64.4
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 3.3e-32 144.1 135 63.7
Medtr5g069620 Medicago truncatula HOM05D004210 ORTHO05D005017 1.1e-22 112.5 86 60.5
Nn1g02745 Nelumbo nucifera HOM05D000508 ORTHO05D000371 4.2e-19 100.5 166 40.4
Hma1.2p1_0892F.1_g233370 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 1.8e-14 85.1 40 95.0
unitig_26.g9496 Utricularia gibba HOM05D004210 ORTHO05D005017 2.0e-13 81.6 61 63.9
Nn1g04650 Nelumbo nucifera HOM05D004210 ORTHO05D005017 2.9e-12 77.8 40 85.0
Lalb_Chr03g0032271 Lupinus albus HOM05D004210 ORTHO05D005017 6.7e-09 66.6 36 83.3
SHI06412 Sapria himalayana HOM05D004210 ORTHO05D000023 1.1e-08 65.9 33 84.8
BcaC01g03529 Brassica carinata HOM05D004210 ORTHO05D005017 2.5e-08 64.7 98 40.8
BcaC03g17042 Brassica carinata HOM05D000992 ORTHO05D001928 8.2e-07 59.7 247 25.9
C02p49570 Brassica napus HOM05D000992 ORTHO05D001928 8.2e-07 59.7 247 25.9
A02p32000 Brassica napus HOM05D000992 ORTHO05D001928 2.4e-06 58.2 247 25.1
BolC2t11036H Brassica oleracea HOM05D000992 ORTHO05D001928 2.4e-06 58.2 247 25.5
BraA02t08211Z Brassica rapa HOM05D000992 ORTHO05D001928 2.4e-06 58.2 247 25.1
CARHR257330 Cardamine hirsuta HOM05D000992 ORTHO05D001928 6.9e-06 56.6 232 25.0
Medtr3g040320 Medicago truncatula HOM05D004210 ORTHO05D005017 9.0e-06 56.2 57 50.9
PGR031G3438 Punica granatum HOM05D002999 ORTHO05D003137 9.0e-06 56.2 193 25.4


User provided reference genes

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