Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 1.2e-272 942.6 490 100.0
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 4.7e-232 807.7 489 88.5
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 8.1e-216 753.8 490 79.6
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 4.2e-212 741.5 490 78.6
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 1.4e-204 716.5 515 73.4
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 3.7e-192 675.2 493 71.8
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 6.2e-192 674.5 490 74.9
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 6.7e-170 601.3 488 63.5
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 1.3e-168 597.0 497 62.8
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 3.7e-168 595.5 492 64.2
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 5.9e-166 588.2 492 61.6
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 2.9e-165 585.9 491 61.5
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 1.4e-162 577.0 355 83.9
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 2.4e-159 566.2 494 59.3
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 2.4e-159 566.2 493 60.6
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 7.0e-159 564.7 490 65.9
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 1.7e-157 560.1 494 60.5
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 3.8e-157 558.9 494 58.3
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 8.5e-157 557.8 488 58.8
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 3.2e-156 555.8 490 58.8
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 9.4e-156 554.3 502 59.8
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 1.6e-155 553.5 436 64.4
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 1.4e-154 550.4 490 58.6
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.4e-154 550.4 492 60.2
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 6.8e-154 548.1 522 57.3
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 1.2e-153 547.4 492 58.9
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 4.4e-153 545.4 491 58.2
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 7.5e-153 544.7 490 58.4
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 3.7e-152 542.3 496 58.9
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 6.3e-152 541.6 474 60.5
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 1.8e-151 540.0 500 58.4
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 3.1e-151 539.3 494 58.5
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 4.1e-151 538.9 497 58.8
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 5.4e-151 538.5 503 58.3
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 9.1e-151 537.7 493 58.4
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 1.6e-150 537.0 497 59.2
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 2.7e-150 536.2 502 57.0
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 3.5e-150 535.8 495 58.6
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 1.0e-149 534.3 491 58.9
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 1.3e-149 533.9 490 56.7
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 3.8e-149 532.3 493 57.8
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 6.5e-149 531.6 475 57.3
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 5.5e-148 528.5 473 59.0
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 1.2e-147 527.3 496 57.7
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 2.1e-147 526.6 507 56.8
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 4.7e-147 525.4 493 57.6
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 6.1e-147 525.0 480 59.4
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 1.4e-146 523.9 494 58.3
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 8.8e-146 521.2 492 58.5
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 1.3e-144 517.3 504 56.9
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 8.3e-144 514.6 437 60.9
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 1.4e-143 513.8 494 56.5
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 1.8e-143 513.5 503 56.9
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 2.4e-143 513.1 497 56.9
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 7.0e-143 511.5 491 56.6
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 1.6e-142 510.4 506 56.1
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 1.6e-142 510.4 494 57.1
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 5.9e-142 508.4 492 56.3
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 1.3e-141 507.3 490 54.9
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 4.2e-140 502.3 393 66.7
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 9.5e-140 501.1 490 54.1
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 2.8e-139 499.6 466 57.5
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 4.7e-139 498.8 489 54.4
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 6.1e-139 498.4 493 55.4
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 2.3e-138 496.5 499 54.9
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 3.0e-138 496.1 523 52.4
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 4.0e-138 495.7 498 56.4
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 1.5e-137 493.8 405 62.0
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 3.2e-135 486.1 572 50.2
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 3.2e-135 486.1 502 52.4
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 7.8e-134 481.5 463 56.6
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 1.0e-133 481.1 491 54.4
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 3.3e-132 476.1 439 57.6
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 4.3e-132 475.7 492 54.3
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 3.1e-130 469.5 433 57.5
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 5.2e-130 468.8 490 53.7
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 2.7e-126 456.4 494 51.6
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 4.6e-126 455.7 363 65.0
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 5.0e-125 452.2 494 52.4
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 1.1e-124 451.1 495 51.3
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 3.3e-124 449.5 488 52.0
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 1.6e-123 447.2 496 51.4
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 4.7e-123 445.7 494 51.0
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 5.2e-122 442.2 497 50.3
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 2.6e-121 439.9 497 50.5
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 4.9e-120 435.6 496 49.8
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 1.6e-118 430.6 502 50.8
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 7.8e-118 428.3 503 51.1
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 7.8e-118 428.3 503 51.1
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 1.0e-117 427.9 497 49.1
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 1.3e-117 427.6 502 50.4
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 3.9e-117 426.0 503 50.7
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 2.5e-116 423.3 494 50.2
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.2e-115 421.0 545 47.0
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 4.7e-115 419.1 492 50.4
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 4.0e-114 416.0 358 58.9
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 1.9e-111 407.1 391 55.5
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 2.4e-106 390.2 495 45.9
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 5.2e-106 389.0 494 45.7
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 4.2e-103 379.4 401 51.6
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 1.6e-102 377.5 394 51.5
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 8.7e-101 371.7 347 58.2
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 3.6e-99 366.3 487 43.9
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 2.3e-93 347.1 488 43.2
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 1.6e-91 340.9 249 67.9
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 4.8e-75 286.2 470 39.4
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 2.8e-67 260.4 492 34.1
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 8.2e-67 258.8 264 51.9
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 5.0e-64 249.6 187 67.4
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 2.4e-58 230.7 170 68.2
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 2.6e-57 227.3 352 42.6
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 2.9e-56 223.8 419 34.8
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 2.7e-54 217.2 288 44.8
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.7e-54 217.2 240 52.1
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 4.4e-52 209.9 267 45.7
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 2.5e-47 194.1 134 76.9
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.7e-43 181.4 132 68.2
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 4.5e-41 173.3 108 75.0
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 1.5e-39 168.3 136 62.5
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 1.7e-35 154.8 385 29.9
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 2.2e-35 154.5 172 50.0
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 1.4e-34 151.8 276 38.4
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 5.4e-34 149.8 245 40.4
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 5.5e-31 139.8 132 56.1
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 2.7e-30 137.5 341 32.3
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 8.0e-30 136.0 262 37.0
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 6.3e-27 126.3 109 65.1
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 8.3e-27 125.9 137 51.8
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 5.0e-24 116.7 165 46.7
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 5.6e-15 86.7 106 43.4
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 8.0e-14 82.8 109 48.6
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 5.8e-12 76.6 439 22.6
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 2.5e-07 61.2 89 43.8
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 2.5e-07 61.2 89 43.8


User provided reference genes

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