Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 1.9e-41 172.2 91 100.0
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 2.8e-37 158.3 90 93.3
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 6.2e-37 157.1 90 90.0
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 1.3e-34 149.4 90 86.7
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 4.9e-34 147.5 91 85.7
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 4.9e-34 147.5 90 85.6
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 1.2e-24 116.3 92 67.4
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 2.1e-24 115.5 83 73.5
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 1.8e-23 112.5 91 65.9
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 5.1e-23 110.9 90 67.8
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 6.7e-23 110.5 92 63.0
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 8.7e-23 110.2 92 64.1
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 5.7e-22 107.5 91 63.7
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 7.4e-22 107.1 92 63.0
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 1.3e-21 106.3 90 66.7
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 8.2e-21 103.6 77 68.8
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 1.1e-20 103.2 91 67.0
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 1.4e-20 102.8 91 63.7
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 5.3e-20 100.9 90 61.1
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 5.3e-20 100.9 78 66.7
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 1.2e-19 99.8 78 66.7
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 1.5e-19 99.4 89 62.9
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 2.0e-19 99.0 91 60.4
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 2.6e-19 98.6 89 62.9
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 2.6e-19 98.6 88 60.2
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 3.4e-19 98.2 89 64.0
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 4.5e-19 97.8 92 63.0
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 4.5e-19 97.8 90 62.2
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 5.9e-19 97.4 84 65.5
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 1.3e-18 96.3 91 62.6
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 1.3e-18 96.3 84 64.3
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 1.7e-18 95.9 89 62.9
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 1.7e-18 95.9 91 60.4
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 1.7e-18 95.9 78 66.7
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 1.7e-18 95.9 84 64.3
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 1.7e-18 95.9 84 64.3
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 1.7e-18 95.9 90 56.7
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 2.9e-18 95.1 91 57.1
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 2.9e-18 95.1 91 58.2
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 3.8e-18 94.7 90 58.9
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 5.0e-18 94.4 78 65.4
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 5.0e-18 94.4 91 61.5
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 5.0e-18 94.4 83 62.7
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 4.2e-17 91.3 79 64.6
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 5.5e-17 90.9 78 62.8
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 5.5e-17 90.9 91 54.9
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 7.2e-17 90.5 91 58.2
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 9.3e-17 90.1 76 65.8
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 9.3e-17 90.1 79 63.3
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 9.3e-17 90.1 91 62.6
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 1.2e-16 89.7 76 64.5
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 1.6e-16 89.4 91 56.0
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 2.7e-16 88.6 82 62.2
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 3.6e-16 88.2 79 59.5
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 3.6e-16 88.2 92 57.6
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 3.6e-16 88.2 88 56.8
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 6.1e-16 87.4 88 62.5
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 1.0e-15 86.7 78 62.8
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 2.3e-15 85.5 91 57.1
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 3.0e-15 85.1 92 57.6
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 6.7e-15 84.0 92 55.4
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 1.5e-14 82.8 91 54.9
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 1.9e-14 82.4 85 56.5
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 2.5e-14 82.0 79 62.0
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 2.5e-14 82.0 91 52.7
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 7.4e-14 80.5 80 62.5
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 7.4e-14 80.5 80 62.5
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 1.3e-13 79.7 72 61.1
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 2.2e-13 79.0 80 61.2
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 2.8e-13 78.6 92 52.2
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 1.1e-12 76.6 92 53.3
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 1.4e-12 76.3 77 58.4
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 1.8e-12 75.9 82 58.5
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 3.1e-12 75.1 79 51.9
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 4.1e-12 74.7 77 61.0
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 4.1e-12 74.7 77 59.7
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 5.3e-12 74.3 80 56.2
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 1.2e-11 73.2 99 46.5
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 1.5e-11 72.8 95 53.7
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 7.7e-11 70.5 95 48.4
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 2.2e-10 68.9 58 62.1
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 8.5e-10 67.0 92 44.6
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 1.1e-09 66.6 74 52.7
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 3.2e-09 65.1 95 44.2
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 4.2e-09 64.7 92 43.5
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 1.6e-08 62.8 91 44.0
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 2.7e-08 62.0 83 48.2
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 4.7e-08 61.2 92 41.3
AT1G47820 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 2.3e-07 58.9 54 55.6
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 3.9e-07 58.2 58 55.2
ATR0414G001 Amborella trichopoda HOM05D007627 ORTHO05D009640 6.7e-07 57.4 71 49.3
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 8.8e-07 57.0 89 46.1
AL1G54240 Arabidopsis lyrata HOM05D007627 ORTHO05D009640 9.7e-06 53.5 95 41.1


User provided reference genes

Program Settings