Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 5.4e-135 484.2 221 100.0
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 8.4e-128 460.3 222 95.0
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 6.0e-118 427.6 223 86.1
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.4e-114 416.4 227 82.8
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.3e-112 409.8 236 80.9
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 5.6e-100 367.9 220 74.1
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 2.6e-97 359.0 222 73.9
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 3.4e-97 358.6 218 72.0
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 1.7e-96 356.3 221 73.3
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 2.5e-95 352.4 217 71.4
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.2e-94 350.1 220 71.8
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 4.6e-94 348.2 222 70.7
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 1.0e-93 347.1 221 70.6
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 1.8e-93 346.3 223 70.9
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 3.9e-93 345.1 217 72.8
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 8.7e-93 344.0 189 81.0
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 1.9e-92 342.8 219 70.3
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 4.3e-92 341.7 226 69.5
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 4.3e-92 341.7 219 69.9
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 5.7e-92 341.3 221 69.2
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.3e-91 340.1 221 68.8
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.6e-91 339.7 225 69.8
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 2.8e-91 339.0 222 70.7
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 1.1e-90 337.0 217 70.0
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.8e-90 336.3 219 68.9
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.8e-90 336.3 221 70.1
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.1e-90 335.5 215 67.4
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.1e-90 335.5 215 67.4
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 6.9e-90 334.3 222 68.9
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 6.9e-90 334.3 221 67.0
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 9.0e-90 334.0 220 69.1
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 9.0e-90 334.0 218 69.7
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 1.3e-88 330.1 219 65.8
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 2.9e-88 328.9 219 65.3
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 3.8e-88 328.6 219 65.8
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 5.0e-88 328.2 225 64.9
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 5.0e-88 328.2 213 68.1
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 8.4e-88 327.4 219 67.6
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 8.4e-88 327.4 216 66.7
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 8.4e-88 327.4 224 67.4
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.1e-87 327.0 217 65.0
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.1e-87 327.0 219 68.0
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.1e-87 327.0 215 66.5
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.4e-87 326.6 217 65.0
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.4e-87 326.6 225 68.4
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 2.5e-87 325.9 220 65.9
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 3.2e-87 325.5 225 66.7
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 5.5e-87 324.7 216 65.3
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 5.5e-87 324.7 222 66.7
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 5.5e-87 324.7 222 67.6
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 7.2e-87 324.3 225 64.0
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 9.3e-87 323.9 221 66.5
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.6e-86 323.2 224 67.0
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.6e-86 323.2 262 56.9
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.1e-86 322.8 225 65.8
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 2.1e-86 322.8 221 67.0
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.7e-86 322.4 218 67.4
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.7e-86 322.4 218 67.4
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 4.6e-86 321.6 220 68.2
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.0e-85 320.5 219 67.1
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 1.8e-85 319.7 223 66.4
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 2.3e-85 319.3 228 64.5
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 1.1e-84 317.0 219 64.4
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 1.6e-83 313.2 290 53.1
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 2.8e-83 312.4 222 65.3
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 3.7e-83 312.0 222 64.9
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 8.2e-83 310.8 223 64.1
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 8.2e-83 310.8 221 63.3
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 8.2e-83 310.8 221 63.3
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 2.4e-82 309.3 222 64.4
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 4.1e-82 308.5 227 62.1
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 1.2e-81 307.0 214 63.1
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 1.0e-80 303.9 220 64.5
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 1.3e-80 303.5 225 61.8
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.2e-80 302.8 243 62.1
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 2.9e-80 302.4 194 70.1
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 4.2e-79 298.5 263 56.3
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 7.2e-79 297.7 185 69.7
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.0e-77 293.9 195 68.2
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 5.1e-77 291.6 218 60.6
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 8.8e-77 290.8 223 61.9
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 2.0e-76 289.7 227 58.1
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 2.6e-76 289.3 192 66.7
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.3e-76 288.9 231 59.7
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 6.3e-75 284.6 196 68.4
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.4e-74 283.5 193 65.3
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.1e-74 282.0 188 66.5
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 2.0e-73 279.6 215 60.5
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 2.6e-73 279.3 194 65.5
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 6.5e-72 274.6 191 64.9
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 1.4e-71 273.5 188 63.8
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 9.4e-71 270.8 185 66.5
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.6e-70 270.0 221 56.6
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.6e-70 270.0 221 56.6
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 2.1e-70 269.6 189 66.7
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 3.6e-70 268.9 187 62.0
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 4.7e-70 268.5 192 64.1
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 8.8e-69 264.2 219 58.9
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 8.8e-69 264.2 182 61.0
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 3.3e-68 262.3 182 61.5
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 3.3e-68 262.3 186 61.3
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 1.7e-67 260.0 182 61.0
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 1.7e-67 260.0 183 60.7
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.1e-66 257.3 196 62.8
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 1.8e-66 256.5 133 85.0
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 9.1e-66 254.2 189 64.0
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 9.1e-66 254.2 189 64.0
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.0e-64 250.8 218 52.8
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 9.4e-63 244.2 196 58.2
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 2.3e-61 239.6 220 56.8
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 2.8e-59 232.6 199 54.8
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 2.8e-51 206.1 161 61.5
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 6.3e-51 204.9 221 45.2
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 6.3e-51 204.9 143 66.4
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 1.8e-34 150.2 76 77.6
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 2.4e-34 149.8 76 76.3
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 5.4e-18 95.5 197 34.0
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 4.3e-07 59.3 61 37.7


User provided reference genes

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