Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001587g0030 Nicotiana tabacum HOM05D004378 ORTHO05D005269 2.9e-307 1057.7 539 100.0
Nitab4.5_0002741g0140 Nicotiana tabacum HOM05D004378 ORTHO05D005269 2.1e-212 742.7 513 76.8
PGSC0003DMG400007339 Solanum tuberosum HOM05D004378 ORTHO05D005269 3.1e-152 542.7 347 80.4
Sopen11g025430 Solanum pennellii HOM05D004378 ORTHO05D005269 4.1e-152 542.3 332 83.4
Peaxi162Scf00004g02527 Petunia axillaris HOM05D004378 ORTHO05D005269 1.0e-150 537.7 326 84.4
Nitab4.5_0000023g0700 Nicotiana tabacum HOM05D004378 ORTHO05D005269 1.2e-138 497.7 353 73.4
Nitab4.5_0002786g0020 Nicotiana tabacum HOM05D004378 ORTHO05D005269 7.5e-138 495.0 365 71.8
Peaxi162Scf00032g00327 Petunia axillaris HOM05D004378 ORTHO05D005269 7.0e-136 488.4 342 74.6
CAN.G1204.2 Capsicum annuum HOM05D004378 ORTHO05D005269 1.7e-134 483.8 348 73.9
Duzib150G1120 Durio zibethinus HOM05D004378 ORTHO05D005269 1.0e-131 474.6 335 72.5
MSTRG.18430 Avicennia marina HOM05D004378 ORTHO05D005269 8.8e-131 471.5 309 75.7
CSS0043718 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 2.0e-130 470.3 345 71.9
Duzib168G0314 Durio zibethinus HOM05D004378 ORTHO05D005269 2.6e-130 469.9 351 70.1
Oeu001481.2 Olea europaea HOM05D004378 ORTHO05D005269 2.6e-130 469.9 321 75.4
Dinv22174 Davidia involucrata HOM05D004378 ORTHO05D005269 3.4e-130 469.5 322 74.8
Migut.D00605 Erythranthe guttata HOM05D004378 ORTHO05D005269 3.4e-130 469.5 318 73.6
Sopen01g003990 Solanum pennellii HOM05D004378 ORTHO05D005269 3.4e-130 469.5 348 71.6
Solyc01g008470.3 Solanum lycopersicum HOM05D004378 ORTHO05D005269 5.7e-130 468.8 348 71.6
Rhsim13G0220800 Rhododendron simsii HOM05D004378 ORTHO05D005269 1.7e-129 467.2 319 74.0
Nn2g15350 Nelumbo nucifera HOM05D004378 ORTHO05D005269 4.8e-129 465.7 334 71.0
Oeu016680.1 Olea europaea HOM05D004378 ORTHO05D005269 6.3e-129 465.3 324 73.8
PGSC0003DMG400010703 Solanum tuberosum HOM05D004378 ORTHO05D005269 1.4e-128 464.2 352 71.0
Thecc.09G234500 Theobroma cacao HOM05D004378 ORTHO05D005269 1.8e-128 463.8 340 71.5
COL.COLO4_07579 Corchorus olitorius HOM05D004378 ORTHO05D005269 2.4e-128 463.4 319 75.2
Atru.chr3.2709 Acer truncatum HOM05D004378 ORTHO05D005269 7.0e-128 461.8 359 69.4
Actinidia16337 Actinidia chinensis HOM05D004378 ORTHO05D005269 9.1e-128 461.5 320 74.1
SGA_v2.0_scaffold247G44883 Striga asiatica HOM05D004378 ORTHO05D005269 1.6e-127 460.7 311 74.0
Nn7g36225 Nelumbo nucifera HOM05D004378 ORTHO05D005269 2.0e-127 460.3 389 65.3
Haze_23143 Corylus avellana HOM05D004378 ORTHO05D005269 4.5e-127 459.1 348 70.4
Cc01_g04470 Coffea canephora HOM05D004378 ORTHO05D005269 5.9e-127 458.8 356 68.3
DCAR_030049 Daucus carota HOM05D004378 ORTHO05D005269 2.3e-126 456.8 345 69.6
Actinidia06909 Actinidia chinensis HOM05D004378 ORTHO05D005269 6.6e-126 455.3 334 70.4
Migut.N02321 Erythranthe guttata HOM05D004378 ORTHO05D005269 6.6e-126 455.3 322 71.4
GSVIVG01025251001 Vitis vinifera HOM05D004378 ORTHO05D005269 6.6e-126 455.3 345 69.6
CiPaw.14G118500 Carya illinoinensis HOM05D004378 ORTHO05D005269 1.1e-125 454.5 350 68.3
RcHm_v2.0_Chr5g0052271 Rosa chinensis HOM05D004378 ORTHO05D005269 1.5e-125 454.1 354 68.1
Cfa009777 Carpinus fangiana HOM05D004378 ORTHO05D005269 3.3e-125 453.0 323 72.1
Gohir.A08G013900 Gossypium hirsutum HOM05D004378 ORTHO05D005269 3.3e-125 453.0 355 67.9
Gohir.D08G024400 Gossypium hirsutum HOM05D004378 ORTHO05D005269 3.3e-125 453.0 355 67.9
Gorai.004G019800 Gossypium raimondii HOM05D004378 ORTHO05D005269 3.3e-125 453.0 355 67.9
Potri.009G052800 Populus trichocarpa HOM05D004378 ORTHO05D005269 7.2e-125 451.8 352 69.3
Medtr3g061490 Medicago truncatula HOM05D004378 ORTHO05D005269 1.2e-124 451.1 324 70.4
Prupe.4G250000 Prunus persica HOM05D004378 ORTHO05D005269 1.6e-124 450.7 355 67.3
Lj6g0003660 Lotus japonicus HOM05D004378 ORTHO05D005269 2.8e-124 449.9 323 70.9
Hma1.2p1_0368F.1_g137300 Hydrangea macrophylla HOM05D004378 ORTHO05D005269 4.7e-124 449.1 325 72.3
Manes.06G163800 Manihot esculenta HOM05D004378 ORTHO05D005269 4.7e-124 449.1 356 66.0
TAR369G0513 Trochodendron aralioides HOM05D004378 ORTHO05D005269 4.7e-124 449.1 301 76.1
FAN25G2048 Fragaria x ananassa HOM05D004378 ORTHO05D005269 8.0e-124 448.4 321 71.3
Ca_14874_v3 Cicer arietinum L. HOM05D004378 ORTHO05D005269 1.0e-123 448.0 325 70.5
FvH4_3g28770 Fragaria vesca HOM05D004378 ORTHO05D005269 1.0e-123 448.0 359 66.3
HanXRQChr13g0401501 Helianthus annuus HOM05D004378 ORTHO05D005269 1.8e-123 447.2 356 67.4
TWI60G1037 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 1.8e-123 447.2 348 67.8
FAN11G1994 Fragaria x ananassa HOM05D004378 ORTHO05D005269 4.0e-123 446.0 321 71.0
FAN16G3181 Fragaria x ananassa HOM05D004378 ORTHO05D005269 6.8e-123 445.3 320 71.2
CANSAT54G1532 Cannabis sativa HOM05D004378 ORTHO05D005269 1.2e-122 444.5 360 66.1
CiPaw.13G159900 Carya illinoinensis HOM05D004378 ORTHO05D005269 2.0e-122 443.7 355 66.2
arahy.Tifrunner.gnm1.ann1.B78H3K Arachis hypogaea HOM05D004378 ORTHO05D005269 2.6e-122 443.4 326 70.9
arahy.Tifrunner.gnm1.ann1.YL0VRD Arachis hypogaea HOM05D004378 ORTHO05D005269 3.4e-122 443.0 326 70.9
TPR.G14725 Trifolium pratense HOM05D004378 ORTHO05D005269 3.4e-122 443.0 325 69.8
Ciclev10015746m.g Citrus clementina HOM05D004378 ORTHO05D005269 4.4e-122 442.6 355 66.2
QL01p004640 Quercus lobata HOM05D004378 ORTHO05D005269 1.3e-121 441.0 356 66.9
ECA233G1578 Erigeron canadensis HOM05D004378 ORTHO05D005269 1.7e-121 440.7 351 66.7
Lalb_Chr15g0082531 Lupinus albus HOM05D004378 ORTHO05D005269 3.7e-121 439.5 351 67.0
Glyma.08G336000 Glycine max HOM05D004378 ORTHO05D005269 6.3e-121 438.7 321 70.1
Glyma.18G071100 Glycine max HOM05D004378 ORTHO05D005269 6.3e-121 438.7 308 72.1
Potri.001G257500 Populus trichocarpa HOM05D004378 ORTHO05D005269 8.3e-121 438.3 349 67.6
TWI34G1172 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 1.8e-120 437.2 348 68.1
MD11G1192300 Malus domestica HOM05D004378 ORTHO05D005269 2.4e-120 436.8 355 66.5
Sabra16G0157500 Salix brachista HOM05D004378 ORTHO05D005269 3.2e-120 436.4 350 66.3
SGA_v2.0_scaffold8G04586 Striga asiatica HOM05D004378 ORTHO05D005269 5.4e-120 435.6 300 72.0
HanXRQChr02g0051301 Helianthus annuus HOM05D004378 ORTHO05D005269 1.2e-119 434.5 326 69.0
CSS0001002 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 1.6e-119 434.1 319 71.8
Sabra09G0038500 Salix brachista HOM05D004378 ORTHO05D005269 3.5e-119 433.0 364 64.6
unitig_699.g19136 Utricularia gibba HOM05D004378 ORTHO05D005269 3.5e-119 433.0 323 68.4
Sed0026402 Sechium edule HOM05D004378 ORTHO05D005269 4.5e-119 432.6 351 65.2
VMungo0540G0714 Vigna mungo HOM05D004378 ORTHO05D005269 4.5e-119 432.6 326 69.9
MELO3C015197.2 Cucumis melo HOM05D004378 ORTHO05D005269 5.9e-119 432.2 346 66.2
PSO384G0525 Papaver somniferum HOM05D004378 ORTHO05D005269 5.9e-119 432.2 317 68.1
PSO339G6315 Papaver somniferum HOM05D004378 ORTHO05D005269 1.0e-118 431.4 317 68.1
unitig_27.g24995 Utricularia gibba HOM05D004378 ORTHO05D005269 1.0e-118 431.4 322 69.6
Lalb_Chr18g0050451 Lupinus albus HOM05D004378 ORTHO05D005269 1.7e-118 430.6 353 65.7
MBI04_g36075_MAGBIO Magnolia biondii HOM05D004378 ORTHO05D005269 1.7e-118 430.6 310 69.7
Psat5g163880 Pisum sativum HOM05D004378 ORTHO05D005269 5.0e-118 429.1 351 64.4
CsaV3_1G042790 Cucumis sativus L. HOM05D004378 ORTHO05D005269 8.6e-118 428.3 346 65.6
CDE05G0340 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 1.5e-117 427.6 344 66.3
Hund22027 Selenicereus undatus HOM05D004378 ORTHO05D005269 2.5e-117 426.8 339 66.4
CDE05G0884 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 3.3e-117 426.4 344 65.4
Phvul.006G062100 Phaseolus vulgaris HOM05D004378 ORTHO05D005269 5.6e-117 425.6 326 68.7
ClCG03G013210 Citrullus lanatus HOM05D004378 ORTHO05D005269 2.8e-116 423.3 355 63.7
EL10Ac4g10244 Beta vulgaris HOM05D004378 ORTHO05D005269 3.6e-116 422.9 354 63.8
Aqoxy1G00284 Aquilegia oxysepala HOM05D004378 ORTHO05D005269 6.1e-116 422.2 353 63.5
Lsat_1_v5_gn_2_31060 Lactuca sativa HOM05D004378 ORTHO05D005269 8.0e-116 421.8 322 68.0
Eucgr.J00761 Eucalyptus grandis HOM05D004378 ORTHO05D005269 1.4e-115 421.0 352 63.9
THA.LOC104799106 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 6.8e-115 418.7 331 65.9
Lsat_1_v5_gn_6_26200 Lactuca sativa HOM05D004378 ORTHO05D005269 4.9e-113 412.5 329 65.7
Lj2A629T47 Lonicera japonica HOM05D004378 ORTHO05D005269 5.4e-112 409.1 322 67.1
AUR62000126 Chenopodium quinoa HOM05D004378 ORTHO05D005269 7.0e-112 408.7 328 63.7
ATR0332G071 Amborella trichopoda HOM05D004378 ORTHO05D005269 3.5e-111 406.4 328 65.5
Dinv36255 Davidia involucrata HOM05D004378 ORTHO05D005269 3.0e-110 403.3 280 73.9
Aa31LG10G3540 Aethionema arabicum HOM05D004378 ORTHO05D005269 5.0e-110 402.5 306 67.6
CARHR096800 Cardamine hirsuta HOM05D004378 ORTHO05D005269 5.0e-110 402.5 346 61.6
Ah.06g194140 Amaranthus hybridus HOM05D004378 ORTHO05D005269 1.5e-109 401.0 350 61.7
Os02g0435000 Oryza sativa ssp. japonica HOM05D004378 ORTHO05D005269 9.5e-109 398.3 349 58.5
Zm00001eb064100 Zea mays HOM05D004378 ORTHO05D005269 2.1e-108 397.1 364 57.4
PGR119G1351 Punica granatum HOM05D004378 ORTHO05D005269 3.1e-107 393.3 322 64.3
BcaB04g20618 Brassica carinata HOM05D004378 ORTHO05D005269 4.0e-107 392.9 350 60.6
Zm00001eb210940 Zea mays HOM05D004378 ORTHO05D005269 5.2e-107 392.5 366 55.7
THA.LOC104816878 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 6.8e-107 392.1 346 62.7
THA.LOC104824616 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 3.4e-106 389.8 345 61.4
AT3G20920 Arabidopsis thaliana HOM05D004378 ORTHO05D005269 5.8e-106 389.0 323 62.2
Carub.0003s2090 Capsella rubella HOM05D004378 ORTHO05D005269 2.2e-105 387.1 349 60.2
Sp3g18950 Schrenkiella parvula HOM05D004378 ORTHO05D005269 8.3e-105 385.2 350 60.6
BcaC01g03532 Brassica carinata HOM05D004378 ORTHO05D005269 1.1e-104 384.8 343 61.2
A01p33870 Brassica napus HOM05D004378 ORTHO05D005269 1.1e-104 384.8 350 59.4
C03p51390 Brassica napus HOM05D004378 ORTHO05D005269 1.1e-104 384.8 343 61.2
BraA05t21666Z Brassica rapa HOM05D004378 ORTHO05D005269 1.4e-104 384.4 347 60.2
Manes.14G003200 Manihot esculenta HOM05D004378 ORTHO05D005269 1.4e-104 384.4 332 62.3
A05p27790 Brassica napus HOM05D004378 ORTHO05D005269 3.2e-104 383.3 347 60.2
A03p41980 Brassica napus HOM05D004378 ORTHO05D005269 4.1e-104 382.9 344 60.8
BraA03t13351Z Brassica rapa HOM05D004378 ORTHO05D005269 4.1e-104 382.9 344 60.8
BcaB06g26169 Brassica carinata HOM05D004378 ORTHO05D005269 5.4e-104 382.5 343 61.2
BraA01t03495Z Brassica rapa HOM05D004378 ORTHO05D005269 5.4e-104 382.5 350 59.1
Thhalv10021027m.g Eutrema salsugineum HOM05D004378 ORTHO05D005269 1.0e-102 378.3 350 59.7
BolC3t17425H Brassica oleracea HOM05D004378 ORTHO05D005269 1.7e-102 377.5 357 58.5
C05p43130 Brassica napus HOM05D004378 ORTHO05D005269 2.3e-102 377.1 347 59.1
BolC5t33043H Brassica oleracea HOM05D004378 ORTHO05D005269 2.3e-102 377.1 347 59.1
Aa31LG8G7740 Aethionema arabicum HOM05D004378 ORTHO05D005269 1.9e-101 374.0 352 57.7
Sed0000917 Sechium edule HOM05D004378 ORTHO05D005269 3.6e-100 369.8 353 58.4
Actinidia06345 Actinidia chinensis HOM05D004378 ORTHO05D005269 6.2e-100 369.0 282 68.4
SHI29790 Sapria himalayana HOM05D004378 ORTHO05D005269 2.0e-98 364.0 313 65.5
HPP92_024875 Vanilla planifolia HOM05D004378 ORTHO05D005269 2.6e-98 363.6 345 54.5
BcaB06g26167 Brassica carinata HOM05D004378 ORTHO05D005269 6.4e-97 359.0 325 59.7
SEGI_31334 Sequoiadendron giganteum HOM05D004378 ORTHO05D005269 4.1e-96 356.3 322 57.1
Lj1A330G22 Lonicera japonica HOM05D004378 ORTHO05D005269 3.0e-94 350.1 289 64.7
vmacro04153 Vaccinium macrocarpon HOM05D004378 ORTHO05D005269 8.6e-94 348.6 456 47.1
CAN.G494.6 Capsicum annuum HOM05D004378 ORTHO05D005269 9.6e-93 345.1 216 79.2
AL3G34880 Arabidopsis lyrata HOM05D004378 ORTHO05D005269 2.1e-92 344.0 270 64.8
BcaC05g28205 Brassica carinata HOM05D004378 ORTHO05D005269 3.2e-88 330.1 342 55.0
BolC1t04284H Brassica oleracea HOM05D004378 ORTHO05D005269 1.2e-82 311.6 260 61.2
SMO117G0234 Selaginella moellendorffii HOM05D004378 ORTHO05D005269 7.1e-80 302.4 333 49.2
Mapoly0080s0045 Marchantia polymorpha HOM05D004378 ORTHO05D005269 2.7e-79 300.4 305 50.2
MSTRG.21374 Avicennia marina HOM05D004378 ORTHO05D005269 2.5e-77 293.9 205 70.7
Pp3c16_12820 Physcomitrium patens HOM05D004378 ORTHO05D005269 4.3e-77 293.1 276 52.9
AagrBONN_evm.TU.Sc2ySwM_228.3794 Anthoceros agrestis HOM05D004378 ORTHO05D005269 5.3e-75 286.2 310 51.0
Cpa.g.sc84.48 Carica papaya HOM05D004378 ORTHO05D005269 1.3e-73 281.6 214 67.8
Peaxi162Scf00004g02528 Petunia axillaris HOM05D004378 ORTHO05D005269 2.2e-73 280.8 256 60.2
Pp3c27_5530 Physcomitrium patens HOM05D004378 ORTHO05D005269 6.0e-71 272.7 337 47.5
FAN21G1987 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.1e-69 268.5 210 65.2
MD03G1174500 Malus domestica HOM05D004378 ORTHO05D005269 6.2e-68 262.7 215 63.7
Lalb_Chr20g0115221 Lupinus albus HOM05D004378 ORTHO05D005269 2.6e-66 257.3 217 61.8
Sc09g0000750 Simmondsia chinensis HOM05D004378 ORTHO05D005269 2.6e-66 257.3 178 71.9
CBR_g54322 Chara braunii HOM05D004378 ORTHO05D005269 2.1e-63 247.7 313 43.1
TAR623G1006 Trochodendron aralioides HOM05D004378 ORTHO05D005269 5.9e-50 203.0 148 68.9
AUR62019307 Chenopodium quinoa HOM05D004378 ORTHO05D005269 1.8e-43 181.4 128 66.4
MSTRG.21373 Avicennia marina HOM05D004378 ORTHO05D005269 5.9e-42 176.4 147 66.7
TAR057G0002 Trochodendron aralioides HOM05D004378 ORTHO05D005269 1.3e-41 175.3 105 81.0
Lalb_Chr20g0115231 Lupinus albus HOM05D004378 ORTHO05D005269 2.5e-40 171.0 130 70.8
Sopen01g004010 Solanum pennellii HOM05D004378 ORTHO05D005269 4.4e-37 160.2 103 75.7
SHI32640 Sapria himalayana HOM05D004378 ORTHO05D000001 4.5e-34 150.2 89 76.4
Solyc03g096225.1 Solanum lycopersicum HOM05D004378 ORTHO05D005269 1.4e-27 128.6 87 66.7
Cre02.g084050 Chlamydomonas reinhardtii HOM05D004378 ORTHO05D005269 2.6e-21 107.8 272 27.6
MCO14G148 Micromonas commoda HOM05D004378 ORTHO05D005269 2.0e-13 81.6 249 27.3


User provided reference genes

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