Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001586g0190 Nicotiana tabacum HOM05D003574 ORTHO05D010997 4.8e-96 354.4 166 100.0
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-39 166.8 101 79.2
Nitab4.5_0001057g0110 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.9e-39 166.4 100 77.0
Nitab4.5_0000199g0110 Nicotiana tabacum HOM05D000995 ORTHO05D010997 4.2e-39 165.2 101 78.2
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 1.0e-37 160.6 101 77.2
Nitab4.5_0000032g0300 Nicotiana tabacum HOM05D000995 ORTHO05D010997 6.7e-37 157.9 101 76.2
Nitab4.5_0007010g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 8.7e-37 157.5 101 75.2
Nitab4.5_0000621g0100 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.1e-34 150.6 101 71.3
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.8e-33 144.8 101 71.3
Nitab4.5_0004998g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.9e-32 141.7 93 76.3
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 1.1e-28 130.6 79 77.2
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-28 129.8 78 80.8
Nitab4.5_0008600g0040 Nicotiana tabacum HOM05D003574 ORTHO05D010997 7.4e-28 127.9 72 86.1
Nitab4.5_0000687g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-26 122.1 101 62.4
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-25 119.8 72 76.4
PGSC0003DMG400009586 Solanum tuberosum HOM05D000995 ORTHO05D000638 7.6e-25 117.9 101 53.5
Nitab4.5_0013377g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 8.4e-24 114.4 79 69.6
Nitab4.5_0020094g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.4e-24 114.4 79 69.6
Nitab4.5_0004446g0030 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.9e-23 113.2 73 71.2
Nitab4.5_0004669g0030 Nicotiana tabacum HOM05D003574 ORTHO05D010997 3.2e-23 112.5 63 82.5
Nitab4.5_0001742g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 4.2e-23 112.1 62 82.3
Nitab4.5_0000053g0090 Nicotiana tabacum HOM05D003574 ORTHO05D010997 9.3e-23 110.9 73 75.3
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.3e-23 110.9 62 82.3
Nitab4.5_0000959g0020 Nicotiana tabacum HOM05D003574 ORTHO05D000638 4.6e-22 108.6 80 70.0
Nitab4.5_0001591g0140 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.0e-21 107.5 62 80.6
Nitab4.5_0022150g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.8e-21 106.7 62 77.4
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-21 105.9 62 79.0
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-21 105.9 62 82.3
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.0e-21 105.9 97 51.5
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 5.1e-21 105.1 101 48.5
PGSC0003DMG400001285 Solanum tuberosum HOM05D000995 ORTHO05D000638 5.1e-21 105.1 101 48.5
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-20 103.2 72 70.8
Nitab4.5_0013975g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.9e-20 103.2 62 75.8
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-20 102.8 62 77.4
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 1.3e-19 100.5 93 48.4
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 2.2e-19 99.8 128 39.8
Nitab4.5_0004356g0050 Nicotiana tabacum HOM05D003574 ORTHO05D010997 4.8e-19 98.6 52 88.5
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 8.2e-19 97.8 101 46.5
Nitab4.5_0024528g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.4e-18 96.3 55 83.6
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.4e-18 96.3 101 45.5
Nitab4.5_0012756g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-17 92.0 80 62.5
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.5e-17 92.0 101 43.6
Nitab4.5_0001960g0110 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.9e-16 89.4 52 78.8
Nitab4.5_0000004g0040 Nicotiana tabacum HOM05D003574 ORTHO05D010997 3.8e-16 89.0 52 80.8
PGSC0003DMG400038482 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.1e-15 87.4 89 47.2
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-15 87.0 70 64.3
Nitab4.5_0005402g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.6e-14 82.0 46 82.6
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-14 81.6 49 75.5
Nitab4.5_0002941g0050 Nicotiana tabacum HOM05D000995 ORTHO05D000638 3.9e-13 79.0 89 50.6
Solyc04g048905.1 Solanum lycopersicum HOM05D000995 ORTHO05D001773 6.7e-13 78.2 67 49.3
Nitab4.5_0010291g0010 Nicotiana tabacum HOM05D000995 ORTHO05D000638 8.8e-13 77.8 50 70.0
Nitab4.5_0001247g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.3e-11 71.6 76 46.1
Nitab4.5_0003295g0040 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.5e-09 67.0 37 83.8
CAN.G624.18 Capsicum annuum HOM05D000995 ORTHO05D000638 3.4e-09 65.9 98 39.8
Nitab4.5_0009418g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-09 65.9 39 74.4
Nitab4.5_0000481g0130 Nicotiana tabacum HOM05D000995 ORTHO05D010997 7.7e-09 64.7 50 64.0
Nitab4.5_0000481g0140 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.9e-08 62.8 69 44.9
Nitab4.5_0009953g0030 Nicotiana tabacum HOM05D003911 ORTHO05D010997 1.4e-07 60.5 69 43.5
Nitab4.5_0007148g0060 Nicotiana tabacum HOM05D003574 ORTHO05D010997 4.2e-07 58.9 37 73.0
Nitab4.5_0009021g0030 Nicotiana tabacum HOM05D003574 ORTHO05D010997 9.4e-07 57.8 37 73.0
CAN.G322.132 Capsicum annuum HOM05D000995 ORTHO05D000638 1.6e-06 57.0 66 40.9
Nitab4.5_0004998g0020 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.1e-06 56.6 34 76.5
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-06 55.8 34 73.5
Nitab4.5_0010513g0020 Nicotiana tabacum HOM05D000995 ORTHO05D001773 6.1e-06 55.1 34 73.5


User provided reference genes

Program Settings