Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 4.3e-86 321.2 157 100.0
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 8.4e-82 307.0 155 96.1
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 1.5e-78 296.2 155 91.0
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 1.5e-78 296.2 155 91.0
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 1.5e-78 296.2 155 91.0
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 2.8e-77 292.0 155 89.0
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 9.3e-73 276.9 156 85.3
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 1.0e-66 256.9 150 83.3
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 4.9e-66 254.6 154 77.3
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 2.5e-65 252.3 154 74.7
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 5.5e-65 251.1 157 79.0
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 2.1e-64 249.2 158 77.2
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 2.7e-64 248.8 148 80.4
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 3.5e-64 248.4 152 76.3
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 4.6e-64 248.1 157 74.5
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 6.0e-64 247.7 153 76.5
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 7.9e-64 247.3 135 83.7
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 1.0e-63 246.9 149 78.5
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 1.3e-63 246.5 155 74.2
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 1.3e-63 246.5 151 76.8
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 1.8e-63 246.1 154 75.3
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 1.8e-63 246.1 154 72.7
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 3.0e-63 245.4 135 82.2
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 3.9e-63 245.0 142 78.9
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 5.1e-63 244.6 156 75.0
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 5.1e-63 244.6 135 83.0
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 8.7e-63 243.8 136 80.9
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 1.1e-62 243.4 137 81.0
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 1.5e-62 243.0 154 74.0
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.5e-62 243.0 134 82.1
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 1.9e-62 242.7 155 72.3
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 1.9e-62 242.7 151 75.5
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 2.5e-62 242.3 155 72.9
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 2.5e-62 242.3 147 76.2
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 2.5e-62 242.3 155 76.8
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 2.5e-62 242.3 135 81.5
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 3.3e-62 241.9 158 75.3
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 3.3e-62 241.9 136 80.9
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 4.3e-62 241.5 137 81.0
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 4.3e-62 241.5 137 81.0
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 5.7e-62 241.1 134 81.3
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 5.7e-62 241.1 137 80.3
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 5.7e-62 241.1 147 76.2
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 9.7e-62 240.4 137 81.0
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 9.7e-62 240.4 135 80.7
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 1.3e-61 240.0 154 72.1
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 1.3e-61 240.0 147 75.5
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 1.3e-61 240.0 155 74.2
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 1.6e-61 239.6 157 73.9
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.6e-61 239.6 154 74.0
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 2.1e-61 239.2 155 72.3
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 2.1e-61 239.2 137 80.3
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 2.1e-61 239.2 154 71.4
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 2.1e-61 239.2 159 71.1
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 2.1e-61 239.2 136 80.1
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 2.8e-61 238.8 136 81.6
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 2.8e-61 238.8 136 81.6
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 2.8e-61 238.8 137 79.6
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 2.8e-61 238.8 149 76.5
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 3.7e-61 238.4 134 80.6
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 4.8e-61 238.0 147 74.8
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 4.8e-61 238.0 158 72.2
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 6.3e-61 237.7 136 80.1
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 6.3e-61 237.7 136 80.1
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 6.3e-61 237.7 136 80.1
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 6.3e-61 237.7 136 80.1
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 6.3e-61 237.7 136 80.1
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 6.3e-61 237.7 136 80.1
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 6.3e-61 237.7 150 75.3
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 6.3e-61 237.7 144 77.8
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 6.3e-61 237.7 150 75.3
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 8.2e-61 237.3 135 80.7
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 8.2e-61 237.3 173 68.8
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 8.2e-61 237.3 142 76.1
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 8.2e-61 237.3 142 76.1
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 1.1e-60 236.9 136 80.1
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 1.4e-60 236.5 151 75.5
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 1.8e-60 236.1 149 72.5
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 2.4e-60 235.7 150 74.0
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 2.4e-60 235.7 134 79.1
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.4e-60 235.7 153 71.2
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.4e-60 235.7 153 71.2
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 3.1e-60 235.3 133 79.7
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 3.1e-60 235.3 155 70.3
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 4.1e-60 235.0 137 78.1
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 5.3e-60 234.6 133 78.9
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 6.9e-60 234.2 137 77.4
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 6.9e-60 234.2 152 73.0
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 2.0e-59 232.6 155 71.0
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 2.0e-59 232.6 147 71.4
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 2.6e-59 232.3 150 70.7
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 3.4e-59 231.9 137 77.4
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 4.5e-59 231.5 137 77.4
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 4.5e-59 231.5 137 77.4
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 1.3e-58 229.9 137 76.6
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 1.7e-58 229.6 155 70.3
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 8.5e-58 227.3 150 70.7
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 8.5e-58 227.3 149 70.5
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 2.5e-57 225.7 133 78.2
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 3.2e-57 225.3 156 67.9
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 1.2e-56 223.4 148 71.6
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 1.6e-56 223.0 135 73.3
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 2.7e-56 222.2 139 73.4
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 4.6e-56 221.5 141 73.0
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 2.3e-55 219.2 194 57.2
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.5e-54 216.5 194 57.2
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.5e-54 216.5 199 56.3
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 2.5e-54 215.7 151 69.5
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 7.4e-54 214.2 141 71.6
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 2.2e-53 212.6 173 61.3
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 6.9e-52 207.6 143 65.7
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 1.3e-50 203.4 135 71.1
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 9.1e-44 180.6 104 80.8
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 3.4e-43 178.7 156 53.2
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 6.5e-42 174.5 136 63.2
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 6.5e-42 174.5 97 81.4
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 1.1e-41 173.7 127 61.4
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 1.9e-41 172.9 155 57.4
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 3.6e-32 142.1 84 73.8
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 1.0e-23 114.0 71 73.2
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 3.0e-23 112.5 83 62.7
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 2.7e-19 99.4 84 59.5
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 1.2e-16 90.5 154 34.4
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 7.8e-11 71.2 107 34.6
MBI08_g33170_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 7.5e-06 54.7 31 74.2


User provided reference genes

Program Settings