Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001582g0090 Nicotiana tabacum HOM05D005305 ORTHO05D006394 1.2e-147 526.9 355 100.0
Nitab4.5_0002138g0070 Nicotiana tabacum HOM05D005305 ORTHO05D006394 1.3e-135 486.9 359 90.8
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 8.0e-88 328.2 238 72.3
PGSC0003DMG400035592 Solanum tuberosum HOM05D005305 ORTHO05D006394 8.2e-85 318.2 239 70.7
Solyc11g005490.1 Solanum lycopersicum HOM05D005305 ORTHO05D006394 1.6e-83 313.9 239 69.5
Sopen11g001490 Solanum pennellii HOM05D005305 ORTHO05D006394 1.7e-82 310.5 239 68.6
Peaxi162Scf00025g00263 Petunia axillaris HOM05D005305 ORTHO05D006394 1.2e-54 218.0 160 70.6
Migut.L00049 Erythranthe guttata HOM05D005305 ORTHO05D006394 3.9e-42 176.4 181 53.0
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 3.3e-41 173.3 197 48.7
SGA_v2.0_scaffold47G17682 Striga asiatica HOM05D005305 ORTHO05D006394 7.3e-41 172.2 169 53.8
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 3.5e-35 153.3 160 49.4
PGSC0003DMG400024738 Solanum tuberosum HOM05D005305 ORTHO05D006394 1.7e-34 151.0 133 60.9
Sabra19G0004600 Salix brachista HOM05D005305 ORTHO05D006394 8.4e-29 132.1 241 36.9
Potri.019G002300 Populus trichocarpa HOM05D005305 ORTHO05D006394 5.4e-28 129.4 165 46.7
unitig_32.g10686 Utricularia gibba HOM05D005305 ORTHO05D006394 5.4e-28 129.4 150 45.3
Atru.chr4.616 Acer truncatum HOM05D005305 ORTHO05D006394 2.7e-27 127.1 170 44.1
Sc04g0009640 Simmondsia chinensis HOM05D005305 ORTHO05D006394 6.0e-27 125.9 168 43.5
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 1.3e-26 124.8 149 50.3
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 3.0e-26 123.6 202 43.6
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 8.7e-26 122.1 191 41.4
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 1.5e-25 121.3 148 48.6
DCAR_001409 Daucus carota HOM05D005305 ORTHO05D006394 2.5e-25 120.6 142 46.5
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 2.5e-25 120.6 152 48.0
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 2.5e-25 120.6 172 42.4
COL.COLO4_22382 Corchorus olitorius HOM05D005305 ORTHO05D006394 4.3e-25 119.8 194 41.8
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 4.8e-24 116.3 154 46.1
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 4.8e-24 116.3 144 48.6
Gohir.A11G210433 Gossypium hirsutum HOM05D005305 ORTHO05D006394 3.1e-23 113.6 152 46.1
Gohir.D12G092500 Gossypium hirsutum HOM05D005305 ORTHO05D006394 4.0e-23 113.2 152 45.4
Gorai.008G100000 Gossypium raimondii HOM05D005305 ORTHO05D006394 4.0e-23 113.2 152 45.4
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 1.5e-22 111.3 153 42.5
Dinv02718 Davidia involucrata HOM05D005305 ORTHO05D006394 1.5e-22 111.3 136 50.0
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 1.5e-22 111.3 162 42.6
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 1.5e-22 111.3 158 43.7
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 4.4e-22 109.8 189 40.2
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 1.3e-21 108.2 146 42.5
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 1.3e-21 108.2 146 43.2
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 2.9e-21 107.1 143 45.5
PSO730G0002 Papaver somniferum HOM05D005305 ORTHO05D006394 2.9e-21 107.1 186 36.0
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 4.9e-21 106.3 205 37.1
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 6.4e-21 105.9 145 42.8
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 8.4e-21 105.5 148 45.3
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 1.1e-20 105.1 168 40.5
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.4e-20 104.8 205 36.1
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 1.9e-20 104.4 148 43.9
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 3.2e-20 103.6 149 44.3
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 7.1e-20 102.4 140 42.9
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 7.1e-20 102.4 140 42.9
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 7.1e-20 102.4 171 40.9
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 9.3e-20 102.1 140 42.9
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 1.2e-19 101.7 148 44.6
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 2.7e-19 100.5 147 44.2
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 2.7e-19 100.5 146 43.2
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 3.5e-19 100.1 140 42.1
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 3.5e-19 100.1 148 40.5
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 4.6e-19 99.8 157 40.1
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 4.6e-19 99.8 140 42.1
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 4.6e-19 99.8 145 40.7
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 6.0e-19 99.4 140 41.4
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 7.9e-19 99.0 140 41.4
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 7.9e-19 99.0 151 42.4
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 7.9e-19 99.0 151 42.4
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 7.9e-19 99.0 163 39.3
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 1.0e-18 98.6 158 39.9
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 1.0e-18 98.6 148 43.2
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 1.7e-18 97.8 171 39.8
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 2.3e-18 97.4 184 38.6
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 3.0e-18 97.1 149 40.9
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 5.1e-18 96.3 143 42.0
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 5.1e-18 96.3 146 41.1
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 1.9e-17 94.4 156 36.5
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 7.3e-17 92.4 140 40.7
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 7.3e-17 92.4 144 38.2
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 1.3e-16 91.7 152 36.8
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 1.3e-16 91.7 144 40.3
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 1.6e-16 91.3 140 39.3
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 1.6e-16 91.3 168 36.9
MBI17_g24663_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 3.6e-16 90.1 152 37.5
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 4.8e-16 89.7 152 37.5
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 4.8e-16 89.7 143 37.1
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 4.8e-16 89.7 140 38.6
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 6.2e-16 89.4 140 39.3
PGR042G0513 Punica granatum HOM05D005305 ORTHO05D006394 1.1e-15 88.6 149 40.9
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 1.4e-15 88.2 144 38.2
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 1.4e-15 88.2 139 40.3
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 1.8e-15 87.8 140 39.3
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 2.4e-15 87.4 144 38.9
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 3.1e-15 87.0 141 39.0
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 6.9e-15 85.9 146 34.9
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 6.9e-15 85.9 144 37.5
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 6.9e-15 85.9 146 36.3
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 9.0e-15 85.5 142 38.0
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 9.0e-15 85.5 142 38.0
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 9.0e-15 85.5 142 38.0
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 9.0e-15 85.5 142 38.0
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 1.2e-14 85.1 144 36.1
EL10Ac6g13873 Beta vulgaris HOM05D005305 ORTHO05D006394 1.5e-14 84.7 88 54.5
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 1.5e-14 84.7 144 38.9
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 2.0e-14 84.3 197 31.5
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.6e-14 84.0 144 37.5
PGSC0003DMG401012933 Solanum tuberosum HOM05D005305 ORTHO05D006394 4.5e-14 83.2 84 57.1
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 5.8e-14 82.8 150 34.7
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 2.2e-13 80.9 207 32.4
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.2e-13 80.9 144 36.1
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.8e-13 80.1 196 32.1
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 8.4e-13 79.0 93 50.5
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.1e-12 78.6 143 35.0
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 1.4e-12 78.2 153 36.6
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 7.9e-11 72.4 164 33.5
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 1.5e-09 68.2 144 34.7
SGA_v2.0_scaffold65G22173 Striga asiatica HOM05D005305 ORTHO05D006394 7.4e-09 65.9 73 46.6
ATR0311G001 Amborella trichopoda HOM05D005305 ORTHO05D006394 1.8e-07 61.2 146 34.2
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 2.4e-07 60.8 158 29.1
EL10Ac4g08760 Beta vulgaris HOM05D005305 ORTHO05D006394 6.9e-07 59.3 86 43.0
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 9.0e-07 58.9 105 35.2
Nn1g04620 Nelumbo nucifera HOM05D005305 ORTHO05D006394 9.0e-07 58.9 75 48.0
Sabra19G0015300 Salix brachista HOM05D005305 ORTHO05D006394 1.5e-06 58.2 158 31.6
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 2.6e-06 57.4 131 35.9


User provided reference genes

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