Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001581g0090 Nicotiana tabacum HOM05D007700 ORTHO05D009669 1.7e-69 267.3 152 100.0
Nitab4.5_0003207g0040 Nicotiana tabacum HOM05D007700 ORTHO05D009669 3.5e-67 259.6 152 97.4
Solyc02g082970.1 Solanum lycopersicum HOM05D007700 ORTHO05D009669 1.2e-64 251.1 152 91.4
PGSC0003DMG400040241 Solanum tuberosum HOM05D007700 ORTHO05D009669 2.1e-64 250.4 152 82.9
Sopen02g027760 Solanum pennellii HOM05D007700 ORTHO05D009669 3.6e-64 249.6 152 82.2
CAN.G890.59 Capsicum annuum HOM05D007700 ORTHO05D009669 8.8e-63 245.0 151 93.4
Dinv08534 Davidia involucrata HOM05D007700 ORTHO05D009669 1.7e-50 204.1 152 68.4
Dinv40165 Davidia involucrata HOM05D007700 ORTHO05D009669 1.1e-49 201.4 151 76.2
Cc00_g14260 Coffea canephora HOM05D007700 ORTHO05D009669 4.3e-49 199.5 151 66.9
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 3.7e-45 186.4 151 59.6
QL06p052538 Quercus lobata HOM05D007700 ORTHO05D009669 3.2e-44 183.3 151 58.9
Lj2P490T20 Lonicera japonica HOM05D007700 ORTHO05D009669 9.2e-44 181.8 151 58.9
CANSAT25G3310 Cannabis sativa HOM05D007700 ORTHO05D009669 6.0e-43 179.1 151 60.3
vmacro20514 Vaccinium macrocarpon HOM05D007700 ORTHO05D009669 3.0e-42 176.8 151 56.3
Peaxi162Scf01310g10029 Petunia axillaris HOM05D007700 ORTHO05D009669 5.0e-42 176.0 151 73.5
Manes.01G153300 Manihot esculenta HOM05D007700 ORTHO05D009669 4.3e-41 172.9 151 66.9
Rhsim10G0201800 Rhododendron simsii HOM05D000242 ORTHO05D009669 7.3e-41 172.2 151 54.3
CiPaw.07G004600 Carya illinoinensis HOM05D007700 ORTHO05D009669 9.5e-41 171.8 151 67.5
Eucgr.I02272 Eucalyptus grandis HOM05D007700 ORTHO05D009669 1.2e-40 171.4 151 55.0
Lj3g0022870 Lotus japonicus HOM05D007700 ORTHO05D009669 2.1e-40 170.6 150 55.3
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 3.6e-40 169.9 149 67.1
Rhsim10G0203000 Rhododendron simsii HOM05D000242 ORTHO05D009669 3.6e-40 169.9 151 53.6
Migut.C00922 Erythranthe guttata HOM05D007700 ORTHO05D009669 1.1e-39 168.3 118 69.5
Thecc.01G008500 Theobroma cacao HOM05D007700 ORTHO05D009669 1.4e-39 167.9 148 54.1
Psat4g208920 Pisum sativum HOM05D007700 ORTHO05D009669 1.8e-39 167.5 151 65.6
Ca_23118_v3 Cicer arietinum L. HOM05D007700 ORTHO05D009669 2.3e-39 167.2 152 61.2
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 3.1e-39 166.8 150 62.0
TPR.G28737 Trifolium pratense HOM05D007700 ORTHO05D009669 4.0e-39 166.4 151 62.3
Gohir.A02G176100 Gossypium hirsutum HOM05D007700 ORTHO05D009669 8.9e-39 165.2 148 62.2
Cfa007052 Carpinus fangiana HOM05D007700 ORTHO05D009669 1.2e-38 164.9 149 64.4
PGR119G0746 Punica granatum HOM05D007700 ORTHO05D009669 2.0e-38 164.1 149 63.8
THA.LOC104804288 Tarenaya hassleriana HOM05D007700 ORTHO05D009669 2.0e-38 164.1 149 62.4
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 2.6e-38 163.7 152 50.0
Gohir.D03G003800 Gossypium hirsutum HOM05D007700 ORTHO05D009669 7.5e-38 162.2 148 59.5
Medtr8g005870 Medicago truncatula HOM05D007700 ORTHO05D009669 9.8e-38 161.8 155 60.0
Nn6g31772 Nelumbo nucifera HOM05D007700 ORTHO05D009669 9.8e-38 161.8 151 53.0
TAR625G0909 Trochodendron aralioides HOM05D007700 ORTHO05D009669 8.3e-37 158.7 153 63.4
DCAR_023138 Daucus carota HOM05D007700 ORTHO05D009669 1.1e-36 158.3 151 56.3
Atru.chr3.942 Acer truncatum HOM05D007700 ORTHO05D009669 1.4e-36 157.9 152 52.6
SalBow7G3569 Salvia bowleyana HOM05D007700 ORTHO05D009669 2.4e-36 157.1 112 67.0
HanXRQChr07g0192051 Helianthus annuus HOM05D007700 ORTHO05D009669 4.1e-36 156.4 152 53.3
MSTRG.1126 Avicennia marina HOM05D007700 ORTHO05D009669 7.0e-36 155.6 107 70.1
Thhalv10022683m.g Eutrema salsugineum HOM05D007700 ORTHO05D009669 1.6e-35 154.5 152 48.7
Potri.005G103300 Populus trichocarpa HOM05D007700 ORTHO05D009669 2.7e-35 153.7 150 53.3
Sabra05G0085500 Salix brachista HOM05D007700 ORTHO05D009669 3.9e-34 149.8 152 50.0
SGA_v2.0_scaffold275G46573 Striga asiatica HOM05D007700 ORTHO05D009669 6.6e-34 149.1 118 65.3
Lsat_1_v5_gn_2_74520 Lactuca sativa HOM05D007700 ORTHO05D009669 1.1e-33 148.3 153 57.5
VMungo0331G0753 Vigna mungo HOM05D007700 ORTHO05D009669 2.5e-33 147.1 153 47.1
Glyma.07G109000 Glycine max HOM05D007700 ORTHO05D009669 3.3e-33 146.7 152 48.0
Sp3g31020 Schrenkiella parvula HOM05D007700 ORTHO05D009669 3.3e-33 146.7 152 47.4
ClCG01G020760 Citrullus lanatus HOM05D007700 ORTHO05D009669 9.5e-33 145.2 151 49.0
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 2.1e-32 144.1 154 48.7
MBI05_g43154_MAGBIO Magnolia biondii HOM05D007700 ORTHO05D009669 2.1e-32 144.1 146 51.4
arahy.Tifrunner.gnm1.ann1.HE2L98 Arachis hypogaea HOM05D007700 ORTHO05D009669 3.6e-32 143.3 154 48.7
AL3G50640 Arabidopsis lyrata HOM05D007700 ORTHO05D009669 8.1e-32 142.1 151 44.4
AT2G17670 Arabidopsis thaliana HOM05D007700 ORTHO05D009669 8.1e-32 142.1 151 44.4
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 1.1e-31 141.7 151 56.3
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 2.6e-30 137.1 151 46.4
Prupe.7G178400 Prunus persica HOM05D007700 ORTHO05D009669 5.8e-30 136.0 150 48.7
BcaB07g31715 Brassica carinata HOM05D007700 ORTHO05D009669 1.3e-29 134.8 152 41.4
A09p11480 Brassica napus HOM05D007700 ORTHO05D009669 2.2e-29 134.0 151 43.0
BolC9t54240H Brassica oleracea HOM05D007700 ORTHO05D009669 4.9e-29 132.9 151 42.4
Sed0015131 Sechium edule HOM05D000242 ORTHO05D009669 4.9e-29 132.9 152 44.1
BraA09t36788Z Brassica rapa HOM05D007700 ORTHO05D009669 6.4e-29 132.5 151 42.4
C09p13500 Brassica napus HOM05D007700 ORTHO05D009669 1.1e-28 131.7 151 41.7
Carub.0003s3177 Capsella rubella HOM05D007700 ORTHO05D009669 2.4e-28 130.6 117 49.6
Ciclev10025555m.g Citrus clementina HOM05D007700 ORTHO05D009669 1.3e-26 124.8 150 44.0
CARHR107900 Cardamine hirsuta HOM05D007700 ORTHO05D009669 1.5e-25 121.3 114 52.6
HPP92_025432 Vanilla planifolia HOM05D007700 ORTHO05D009669 2.5e-25 120.6 146 43.8
COL.COLO4_22522 Corchorus olitorius HOM05D007700 ORTHO05D009669 1.9e-20 104.4 106 49.1
CDE05G1147 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 1.2e-19 101.7 116 42.2
FvH4_1g10671 Fragaria vesca HOM05D007700 ORTHO05D009669 6.0e-19 99.4 80 55.0
FAN23G0395 Fragaria x ananassa HOM05D007700 ORTHO05D009669 6.0e-19 99.4 80 55.0
TWI73G0108 Tripterygium wilfordii HOM05D007700 ORTHO05D009669 3.9e-18 96.7 81 54.3
Phvul.010G056500 Phaseolus vulgaris HOM05D007700 ORTHO05D009669 5.1e-18 96.3 156 36.5
ATR0661G421 Amborella trichopoda HOM05D007700 ORTHO05D009669 1.1e-17 95.1 124 45.2
SHI08474 Sapria himalayana HOM05D007700 ORTHO05D009669 4.3e-17 93.2 83 53.0
Lalb_Chr03g0039951 Lupinus albus HOM05D007700 ORTHO05D009669 2.1e-16 90.9 80 57.5
BcaC04g22956 Brassica carinata HOM05D007700 ORTHO05D009669 2.8e-16 90.5 112 39.3
MD02G1120600 Malus domestica HOM05D007700 ORTHO05D009669 4.7e-16 89.7 151 34.4
Actinidia17391 Actinidia chinensis HOM05D000192 ORTHO05D000123 6.2e-16 89.4 77 55.8
Aqoxy6G01792 Aquilegia oxysepala HOM05D007700 ORTHO05D009669 1.8e-15 87.8 87 48.3
AUR62026170 Chenopodium quinoa HOM05D007700 ORTHO05D009669 6.9e-15 85.9 82 50.0
AUR62041102 Chenopodium quinoa HOM05D007700 ORTHO05D009669 6.9e-15 85.9 82 50.0
EL10Ac6g13369 Beta vulgaris HOM05D007700 ORTHO05D009669 2.0e-14 84.3 93 47.3
Glyma.03G117900 Glycine max HOM05D007700 ORTHO05D009669 2.0e-14 84.3 113 40.7
Ah.03g134060 Amaranthus hybridus HOM05D007700 ORTHO05D009669 2.9e-13 80.5 82 50.0
Sc03g0003890 Simmondsia chinensis HOM05D007700 ORTHO05D009669 4.9e-13 79.7 78 46.2
ATR0739G057 Amborella trichopoda HOM05D007700 ORTHO05D009669 2.7e-11 73.9 116 35.3
ECA238G1378 Erigeron canadensis HOM05D007700 ORTHO05D009669 6.2e-08 62.8 35 82.9
CSS0049050 Camellia sinensis var. sinensis HOM05D007700 ORTHO05D009669 4.0e-07 60.1 35 80.0
Sp3g31030 Schrenkiella parvula HOM05D007700 ORTHO05D009669 5.3e-07 59.7 35 77.1
CDE05G1645 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 1.2e-06 58.5 73 39.7


User provided reference genes

Program Settings