Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001580g0030 Nicotiana tabacum HOM05D000955 ORTHO05D001429 6.7e-50 200.3 95 100.0
Nitab4.5_0006312g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.2e-27 126.3 65 92.3
PGSC0003DMG400015414 Solanum tuberosum HOM05D000955 ORTHO05D001429 1.7e-24 115.9 60 85.0
CAN.G1518.8 Capsicum annuum HOM05D000955 ORTHO05D001429 2.2e-24 115.5 64 82.8
Peaxi162Scf01073g00017 Petunia axillaris HOM05D000955 ORTHO05D003340 2.8e-24 115.2 61 86.9
Sopen12g030730 Solanum pennellii HOM05D000955 ORTHO05D001429 2.1e-19 99.0 60 71.7
Solyc12g088840.1 Solanum lycopersicum HOM05D000955 ORTHO05D001429 8.0e-19 97.1 60 71.7
Peaxi162Scf01890g00010 Petunia axillaris HOM05D000955 ORTHO05D001429 2.8e-16 88.6 61 75.4
Nitab4.5_0001024g0060 Nicotiana tabacum HOM05D000955 ORTHO05D001429 9.1e-15 83.6 60 63.3
Nitab4.5_0002501g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.7e-14 82.0 60 63.3
CSS0003971 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 3.8e-13 78.2 63 58.7
CSS0012590 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 3.8e-13 78.2 63 58.7
CAN.G445.5 Capsicum annuum HOM05D000955 ORTHO05D001429 3.8e-13 78.2 61 55.7
CSS0009132 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 5.0e-13 77.8 64 57.8
CSS0027110 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 5.0e-13 77.8 63 58.7
CSS0049247 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 6.5e-13 77.4 63 58.7
PGSC0003DMG400004460 Solanum tuberosum HOM05D000955 ORTHO05D001429 6.5e-13 77.4 60 58.3
CSS0046588 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 2.5e-12 75.5 64 57.8
CSS0008676 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 3.2e-12 75.1 63 57.1
CAN.G705.3 Capsicum annuum HOM05D000955 ORTHO05D001429 3.2e-12 75.1 60 55.0
PGSC0003DMG400023125 Solanum tuberosum HOM05D000955 ORTHO05D001429 4.2e-12 74.7 60 53.3
CAN.G1938.3 Capsicum annuum HOM05D000955 ORTHO05D001429 9.5e-12 73.6 60 53.3
Nitab4.5_0006068g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 9.5e-12 73.6 63 50.8
Nitab4.5_0002468g0040 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.2e-11 73.2 63 50.8
Sopen07g012140 Solanum pennellii HOM05D000955 ORTHO05D001429 1.6e-11 72.8 60 50.0
Nitab4.5_0008115g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.8e-11 72.0 63 52.4
Rhsim06G0048800 Rhododendron simsii HOM05D000955 ORTHO05D003340 2.8e-11 72.0 55 60.0
Actinidia22622 Actinidia chinensis HOM05D000955 ORTHO05D001429 4.7e-11 71.2 56 58.9
Actinidia23270 Actinidia chinensis HOM05D000955 ORTHO05D001429 4.7e-11 71.2 51 64.7
Sopen04g032660 Solanum pennellii HOM05D000955 ORTHO05D001429 4.7e-11 71.2 63 50.8
Nitab4.5_0000686g0120 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.4e-10 69.7 63 49.2
Nitab4.5_0000686g0180 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.4e-10 69.7 63 49.2
CAN.G371.24 Capsicum annuum HOM05D000955 ORTHO05D001429 1.8e-10 69.3 63 50.8
QL02p004928 Quercus lobata HOM05D000955 ORTHO05D001429 1.8e-10 69.3 50 64.0
QL02p005025 Quercus lobata HOM05D000955 ORTHO05D001429 1.8e-10 69.3 50 64.0
vmacro21527 Vaccinium macrocarpon HOM05D000955 ORTHO05D001429 1.8e-10 69.3 56 53.6
Lsat_1_v5_gn_4_125420 Lactuca sativa HOM05D000955 ORTHO05D001429 2.3e-10 68.9 63 49.2
Peaxi162Scf00303g00141 Petunia axillaris HOM05D000955 ORTHO05D001429 2.3e-10 68.9 63 49.2
Sopen01g015530 Solanum pennellii HOM05D000955 ORTHO05D001429 2.3e-10 68.9 60 50.0
CSS0002475 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 4.0e-10 68.2 55 54.5
Ciclev10003536m.g Citrus clementina HOM05D000955 ORTHO05D001429 4.0e-10 68.2 49 57.1
Nitab4.5_0000686g0190 Nicotiana tabacum HOM05D000955 ORTHO05D001429 4.0e-10 68.2 64 48.4
Peaxi162Scf00252g00112 Petunia axillaris HOM05D000955 ORTHO05D001429 5.2e-10 67.8 63 50.8
QL02p005070 Quercus lobata HOM05D000955 ORTHO05D001429 5.2e-10 67.8 49 63.3
CAN.G371.25 Capsicum annuum HOM05D000955 ORTHO05D001429 8.8e-10 67.0 60 51.7
Nitab4.5_0001847g0030 Nicotiana tabacum HOM05D000955 ORTHO05D001429 8.8e-10 67.0 50 58.0
Nitab4.5_0010940g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 8.8e-10 67.0 50 58.0
Rhsim06G0049200 Rhododendron simsii HOM05D000955 ORTHO05D001429 8.8e-10 67.0 55 54.5
Nitab4.5_0000686g0100 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.2e-09 66.6 54 53.7
Nitab4.5_0001101g0030 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.2e-09 66.6 66 50.0
Lsat_1_v5_gn_4_125200 Lactuca sativa HOM05D000955 ORTHO05D001429 1.5e-09 66.2 60 45.0
vmacro21528 Vaccinium macrocarpon HOM05D000955 ORTHO05D001429 1.5e-09 66.2 54 53.7
CSS0002643 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 2.6e-09 65.5 55 52.7
CAN.G371.22 Capsicum annuum HOM05D000955 ORTHO05D001429 2.6e-09 65.5 60 48.3
Hma1.2p1_0982F.1_g243960 Hydrangea macrophylla HOM05D000955 ORTHO05D001429 3.4e-09 65.1 55 56.4
Nitab4.5_0001847g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 4.4e-09 64.7 54 51.9
Rhsim07G0228700 Rhododendron simsii HOM05D000955 ORTHO05D001429 4.4e-09 64.7 56 51.8
Solyc01g150126.1 Solanum lycopersicum HOM05D000955 ORTHO05D001429 4.4e-09 64.7 60 48.3
Rhsim07G0228800 Rhododendron simsii HOM05D000955 ORTHO05D001429 5.7e-09 64.3 54 53.7
Nitab4.5_0000686g0170 Nicotiana tabacum HOM05D000955 ORTHO05D001429 7.5e-09 63.9 63 44.4
Nitab4.5_0001722g0010 Nicotiana tabacum HOM05D001454 ORTHO05D001429 9.8e-09 63.5 46 58.7
Nitab4.5_0001847g0020 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.3e-08 63.2 55 49.1
Thecc.08G008500 Theobroma cacao HOM05D000955 ORTHO05D001429 1.3e-08 63.2 50 56.0
CAN.G371.23 Capsicum annuum HOM05D000955 ORTHO05D001429 1.7e-08 62.8 63 42.9
HanXRQChr09g0267841 Helianthus annuus HOM05D000955 ORTHO05D001429 1.7e-08 62.8 60 45.0
PGSC0003DMG400008042 Solanum tuberosum HOM05D000955 ORTHO05D001429 1.7e-08 62.8 60 48.3
Atru.chr13.675 Acer truncatum HOM05D000955 ORTHO05D001429 3.7e-08 61.6 83 41.0
Atru.chr13.676 Acer truncatum HOM05D000955 ORTHO05D001429 6.3e-08 60.8 85 40.0
CiPaw.16G045200 Carya illinoinensis HOM05D000955 ORTHO05D001429 6.3e-08 60.8 55 49.1
Nitab4.5_0013573g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 6.3e-08 60.8 46 56.5
Rhsim06G0049100 Rhododendron simsii HOM05D000955 ORTHO05D001429 6.3e-08 60.8 52 53.8
Cfa018533 Carpinus fangiana HOM05D000955 ORTHO05D001429 1.1e-07 60.1 56 48.2
Cfa018537 Carpinus fangiana HOM05D000955 ORTHO05D001429 1.1e-07 60.1 84 38.1
Ciclev10002898m.g Citrus clementina HOM05D000955 ORTHO05D001429 1.4e-07 59.7 59 45.8
Manes.18G036100 Manihot esculenta HOM05D000955 ORTHO05D001429 1.4e-07 59.7 60 46.7
Dinv35967 Davidia involucrata HOM05D000955 ORTHO05D001429 1.8e-07 59.3 50 54.0
TWI36G1204 Tripterygium wilfordii HOM05D000955 ORTHO05D001429 1.8e-07 59.3 62 50.0
PGSC0003DMG400008043 Solanum tuberosum HOM05D000955 ORTHO05D001429 2.4e-07 58.9 46 54.3
CiPaw.15G060000 Carya illinoinensis HOM05D000955 ORTHO05D001429 3.1e-07 58.5 63 44.4
CiPaw.16G045300 Carya illinoinensis HOM05D000955 ORTHO05D001429 3.1e-07 58.5 55 47.3
Gohir.A01G119200 Gossypium hirsutum HOM05D000955 ORTHO05D001429 4.1e-07 58.2 60 45.0
Gohir.D01G107400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 4.1e-07 58.2 60 45.0
Gorai.002G131800 Gossypium raimondii HOM05D000955 ORTHO05D001429 4.1e-07 58.2 60 45.0
vmacro04454 Vaccinium macrocarpon HOM05D000955 ORTHO05D001429 4.1e-07 58.2 55 50.9
MBI02_g02966_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 5.4e-07 57.8 54 46.3
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 5.4e-07 57.8 55 47.3
Atru.chr13.673 Acer truncatum HOM05D000955 ORTHO05D001429 7.0e-07 57.4 60 45.0
QL02p005158 Quercus lobata HOM05D000955 ORTHO05D001429 7.0e-07 57.4 84 35.7
Nitab4.5_0000686g0110 Nicotiana tabacum HOM05D000955 ORTHO05D003340 1.2e-06 56.6 69 42.0
Atru.chr13.681 Acer truncatum HOM05D000955 ORTHO05D001429 1.6e-06 56.2 55 50.9
Ah.05g171940 Amaranthus hybridus HOM05D000955 ORTHO05D001429 1.6e-06 56.2 58 48.3
HanXRQChr09g0267701 Helianthus annuus HOM05D000955 ORTHO05D001429 1.6e-06 56.2 57 42.1
Potri.014G030100 Populus trichocarpa HOM05D000955 ORTHO05D001429 1.6e-06 56.2 55 52.7
Sed0000195 Sechium edule HOM05D000955 ORTHO05D001429 1.6e-06 56.2 55 49.1
Atru.chr13.682 Acer truncatum HOM05D000955 ORTHO05D001429 2.0e-06 55.8 55 50.9
CiPaw.15G058900 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.0e-06 55.8 89 37.1
Lsat_1_v5_gn_4_125340 Lactuca sativa HOM05D000955 ORTHO05D001429 2.0e-06 55.8 64 40.6
Cfa018536 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.7e-06 55.5 55 47.3
Duzib093G0375 Durio zibethinus HOM05D000955 ORTHO05D001429 2.7e-06 55.5 60 45.0
Nitab4.5_0001101g0050 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.7e-06 55.5 69 42.0
QL02p005180 Quercus lobata HOM05D000955 ORTHO05D001429 2.7e-06 55.5 55 45.5
QL02p005235 Quercus lobata HOM05D000955 ORTHO05D001429 2.7e-06 55.5 53 47.2
COL.COLO4_26488 Corchorus olitorius HOM05D000955 ORTHO05D001429 3.5e-06 55.1 63 44.4
vmacro23310 Vaccinium macrocarpon HOM05D000955 ORTHO05D001429 3.5e-06 55.1 52 50.0
EL10Ac1g00552 Beta vulgaris HOM05D000955 ORTHO05D001429 4.5e-06 54.7 60 40.0
QL02p005175 Quercus lobata HOM05D000955 ORTHO05D001429 4.5e-06 54.7 62 43.5
Atru.chr13.679 Acer truncatum HOM05D000955 ORTHO05D001429 5.9e-06 54.3 55 45.5
AUR62014425 Chenopodium quinoa HOM05D000955 ORTHO05D001429 5.9e-06 54.3 54 48.1
AUR62019161 Chenopodium quinoa HOM05D000955 ORTHO05D001429 5.9e-06 54.3 54 48.1
AUR62034572 Chenopodium quinoa HOM05D000955 ORTHO05D001429 5.9e-06 54.3 54 48.1
CsaV3_2G027840 Cucumis sativus L. HOM05D000955 ORTHO05D001429 5.9e-06 54.3 60 43.3
Manes.05G173200 Manihot esculenta HOM05D000955 ORTHO05D001429 5.9e-06 54.3 55 45.5
Nitab4.5_0015075g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 5.9e-06 54.3 61 45.9
CAN.G1518.3 Capsicum annuum HOM05D000955 ORTHO05D001429 7.8e-06 53.9 115 34.8
MELO3C010864.2 Cucumis melo HOM05D000955 ORTHO05D001429 7.8e-06 53.9 60 43.3
Lalb_Chr14g0368741 Lupinus albus HOM05D000955 ORTHO05D001429 7.8e-06 53.9 55 47.3


User provided reference genes

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