Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.2e-60 235.3 109 100.0
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 5.9e-42 174.1 108 76.9
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 1.4e-38 162.9 108 72.2
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 9.1e-35 150.2 108 66.7
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 2.7e-34 148.7 107 66.4
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 4.5e-34 147.9 108 65.7
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.9e-32 142.5 108 63.0
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.2e-23 113.2 107 44.9
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 1.2e-23 113.2 106 50.9
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 8.0e-23 110.5 108 47.2
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 2.3e-22 109.0 107 48.6
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 3.0e-22 108.6 113 46.0
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 5.2e-22 107.8 109 45.9
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 6.8e-22 107.5 108 45.4
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 4.4e-21 104.8 109 46.8
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 4.4e-21 104.8 109 45.9
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 5.7e-21 104.4 109 45.9
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 5.7e-21 104.4 103 45.6
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 7.5e-21 104.0 111 45.0
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 9.8e-21 103.6 51 78.4
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 9.8e-21 103.6 107 43.9
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 9.8e-21 103.6 108 49.1
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 1.3e-20 103.2 103 46.6
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 1.7e-20 102.8 103 45.6
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.7e-20 102.8 108 44.4
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 1.7e-20 102.8 108 44.4
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 4.9e-20 101.3 108 46.3
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 6.3e-20 100.9 108 41.7
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 8.3e-20 100.5 108 43.5
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 8.3e-20 100.5 107 44.9
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 1.1e-19 100.1 104 44.2
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.4e-19 99.8 103 46.6
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 1.4e-19 99.8 108 41.7
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.4e-19 99.8 107 43.0
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 1.8e-19 99.4 51 74.5
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 1.8e-19 99.4 51 74.5
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 1.8e-19 99.4 109 43.1
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 1.8e-19 99.4 109 43.1
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.8e-19 99.4 94 45.7
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.8e-19 99.4 51 74.5
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 2.4e-19 99.0 104 44.2
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 2.4e-19 99.0 108 40.7
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.4e-19 99.0 107 43.9
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 3.1e-19 98.6 108 48.1
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 4.1e-19 98.2 102 44.1
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 4.1e-19 98.2 50 74.0
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 7.0e-19 97.4 103 44.7
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 9.2e-19 97.1 109 42.2
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.2e-18 96.7 106 41.5
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.2e-18 96.7 51 72.5
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 1.2e-18 96.7 58 62.1
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.6e-18 96.3 110 40.9
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.6e-18 96.3 110 40.9
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.6e-18 96.3 110 40.9
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.6e-18 96.3 110 40.9
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 1.6e-18 96.3 105 42.9
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 1.6e-18 96.3 106 42.5
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 2.0e-18 95.9 103 43.7
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 2.0e-18 95.9 107 42.1
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 2.7e-18 95.5 103 41.7
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 2.7e-18 95.5 103 41.7
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 2.7e-18 95.5 101 38.6
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 4.5e-18 94.7 103 43.7
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 4.5e-18 94.7 51 66.7
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 4.5e-18 94.7 111 43.2
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 7.8e-18 94.0 103 42.7
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 1.0e-17 93.6 108 45.4
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.3e-17 93.2 107 39.3
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.3e-17 93.2 108 40.7
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 1.7e-17 92.8 51 72.5
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 1.7e-17 92.8 51 72.5
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 2.3e-17 92.4 103 38.8
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 2.3e-17 92.4 108 46.3
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.8e-17 91.7 51 68.6
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 3.8e-17 91.7 46 73.9
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 8.6e-17 90.5 44 77.3
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 8.6e-17 90.5 51 66.7
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 8.6e-17 90.5 44 75.0
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.1e-16 90.1 107 39.3
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 1.1e-16 90.1 111 41.4
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 1.5e-16 89.7 50 66.0
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.5e-16 89.7 101 39.6
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.5e-16 89.7 108 38.0
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.9e-16 89.4 51 64.7
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 1.9e-16 89.4 108 38.9
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 1.9e-16 89.4 108 38.9
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 2.5e-16 89.0 51 64.7
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 3.3e-16 88.6 45 77.8
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 3.3e-16 88.6 51 62.7
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 3.3e-16 88.6 105 40.0
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 4.3e-16 88.2 50 66.0
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 4.3e-16 88.2 106 39.6
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 5.6e-16 87.8 104 42.3
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.2e-15 86.7 108 46.3
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.2e-15 86.7 108 46.3
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 1.2e-15 86.7 110 38.2
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 1.2e-15 86.7 106 37.7
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 4.7e-15 84.7 51 58.8
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 6.8e-14 80.9 44 70.5
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.6e-13 79.0 107 33.6
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 5.8e-13 77.8 111 37.8
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 2.2e-12 75.9 111 37.8
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.9e-12 75.5 44 63.6
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 6.4e-12 74.3 103 33.0
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 3.5e-10 68.6 93 34.4
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.3e-09 66.6 45 57.8
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 9.5e-08 60.5 103 31.1
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 4.0e-06 55.1 111 30.6
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 6.8e-06 54.3 89 30.3


User provided reference genes

Program Settings