Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.1e-158 563.1 273 100.0
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.6e-144 514.6 275 93.5
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.9e-111 405.2 284 73.6
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 7.7e-107 391.0 283 72.4
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.8e-106 388.7 284 73.6
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 8.5e-106 387.5 286 70.6
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 1.4e-105 386.7 286 70.6
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.5e-105 386.0 278 73.7
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 3.8e-90 335.5 286 63.3
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 5.9e-83 311.6 252 62.3
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 2.8e-80 302.8 189 75.7
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 2.8e-80 302.8 215 69.8
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 2.2e-77 293.1 243 60.5
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 4.9e-77 292.0 239 61.9
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 3.2e-76 289.3 192 72.4
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 3.2e-76 289.3 226 64.2
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 3.2e-76 289.3 281 55.2
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 2.0e-75 286.6 220 65.5
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 3.5e-75 285.8 220 65.5
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 3.5e-75 285.8 189 70.4
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.3e-74 283.9 245 60.8
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 3.9e-74 282.3 242 59.1
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 6.6e-74 281.6 195 67.7
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 8.6e-74 281.2 280 55.7
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.9e-73 280.0 237 60.3
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.9e-73 280.0 289 55.0
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 9.5e-73 277.7 230 60.0
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 1.2e-72 277.3 189 69.8
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.6e-72 276.9 245 59.2
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 2.1e-72 276.6 199 67.8
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 2.1e-72 276.6 214 64.5
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 2.8e-72 276.2 218 61.9
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 2.8e-72 276.2 218 61.0
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.6e-72 275.8 245 59.6
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 3.6e-72 275.8 218 64.7
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 4.7e-72 275.4 233 58.8
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 8.0e-72 274.6 250 56.8
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 1.4e-71 273.9 226 60.2
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.8e-71 273.5 245 58.8
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 2.3e-71 273.1 226 60.2
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 2.3e-71 273.1 236 60.2
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.1e-71 272.7 245 58.8
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.0e-71 272.3 245 58.8
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 6.8e-71 271.6 229 61.1
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 1.5e-70 270.4 261 56.7
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 4.4e-70 268.9 207 61.4
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 5.8e-70 268.5 192 70.8
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 7.5e-70 268.1 192 69.3
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 7.5e-70 268.1 228 55.7
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 1.3e-69 267.3 265 52.1
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 1.3e-69 267.3 225 60.4
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 1.3e-69 267.3 237 57.4
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 1.7e-69 266.9 227 56.4
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 1.7e-69 266.9 193 67.9
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 1.7e-69 266.9 214 60.3
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 4.9e-69 265.4 227 56.4
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 6.4e-69 265.0 245 56.3
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 8.3e-69 264.6 193 66.3
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 8.3e-69 264.6 230 58.7
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.1e-68 264.2 200 62.5
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 1.4e-68 263.8 200 62.5
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 2.4e-68 263.1 200 65.0
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 2.4e-68 263.1 234 57.7
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 4.1e-68 262.3 201 64.2
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 2.0e-67 260.0 188 64.9
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 2.7e-67 259.6 187 64.2
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 1.9e-65 253.4 231 61.9
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 1.9e-65 253.4 210 61.4
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 2.8e-64 249.6 224 58.0
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 1.1e-63 247.7 226 55.8
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 3.1e-63 246.1 184 64.7
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 5.2e-63 245.4 226 55.8
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 5.2e-63 245.4 226 55.8
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 8.9e-63 244.6 198 60.1
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 1.2e-62 244.2 198 61.1
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 3.4e-62 242.7 188 62.8
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 4.4e-62 242.3 198 59.6
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 4.4e-62 242.3 227 54.6
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 7.5e-62 241.5 206 57.3
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 1.3e-61 240.7 225 54.2
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 3.7e-61 239.2 233 52.8
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 3.7e-61 239.2 202 58.4
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 6.4e-61 238.4 225 55.1
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 2.4e-60 236.5 231 53.2
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 3.2e-60 236.1 196 59.2
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 3.2e-60 236.1 155 69.7
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 3.2e-60 236.1 233 53.2
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 4.1e-60 235.7 197 58.9
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 4.1e-60 235.7 197 58.4
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 9.2e-60 234.6 224 57.1
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 9.2e-60 234.6 208 57.2
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 9.2e-60 234.6 191 61.3
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 3.5e-59 232.6 197 58.4
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 5.6e-57 225.3 213 57.3
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 2.3e-55 219.9 227 52.0
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.1e-55 219.5 205 53.7
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 9.2e-52 208.0 144 68.8
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 1.0e-50 204.5 146 67.8
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.7e-50 203.8 192 52.1
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 5.1e-50 202.2 185 52.4
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.1e-47 194.5 280 43.6
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 1.1e-44 184.5 187 56.7
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 5.6e-41 172.2 181 49.7
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 3.1e-39 166.4 109 72.5
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 9.0e-39 164.9 141 61.0
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 7.6e-38 161.8 173 50.3
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 9.3e-36 154.8 175 51.4
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.9e-33 147.1 136 58.1
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 1.6e-32 144.1 148 51.4
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.8e-32 143.3 131 53.4
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 8.1e-32 141.7 161 49.1
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.5e-30 137.5 116 59.5
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 1.9e-28 130.6 129 56.6
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 3.2e-28 129.8 135 52.6
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.8e-23 114.0 128 51.6
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 9.0e-23 111.7 111 51.4
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 6.5e-21 105.5 71 67.6
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 4.6e-19 99.4 120 48.3
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-18 97.8 114 40.4
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.0e-18 96.7 95 54.7
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 9.3e-12 75.1 46 71.7
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 4.8e-08 62.8 267 23.6
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 4.1e-07 59.7 64 50.0
Cre16.g657150 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 9.0e-07 58.5 83 43.4
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.2e-06 58.2 66 45.5
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 4.5e-06 56.2 81 35.8


User provided reference genes

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