Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 1.7e-63 245.7 116 100.0
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 7.4e-51 203.8 116 88.8
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 1.1e-35 153.3 125 69.6
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 6.7e-28 127.5 117 57.3
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 6.3e-26 120.9 115 55.7
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 1.1e-25 120.2 119 53.8
CAN.G338.33 Capsicum annuum HOM05D012681 ORTHO05D010506 1.8e-25 119.4 115 55.7
Solyc03g112210.1 Solanum lycopersicum HOM05D012681 ORTHO05D010506 2.0e-19 99.4 105 45.7
Sopen03g031310 Solanum pennellii HOM05D012681 ORTHO05D010506 2.0e-19 99.4 105 45.7
PGSC0003DMG400018124 Solanum tuberosum HOM05D012681 ORTHO05D010506 9.7e-19 97.1 105 45.7
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 2.4e-17 92.4 124 41.9
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 7.0e-17 90.9 121 45.5
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 4.5e-16 88.2 121 44.6
Solyc03g112220.1 Solanum lycopersicum HOM05D012681 ORTHO05D010506 4.5e-16 88.2 107 46.7
Sopen03g031320 Solanum pennellii HOM05D012681 ORTHO05D010506 4.5e-16 88.2 107 46.7
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 1.3e-15 86.7 115 44.3
PGSC0003DMG400018123 Solanum tuberosum HOM05D012681 ORTHO05D010506 1.3e-15 86.7 107 44.9
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 3.8e-15 85.1 130 38.5
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 1.9e-14 82.8 129 41.9
SGA_v2.0_scaffold114G31809 Striga asiatica HOM05D008921 ORTHO05D010506 3.2e-14 82.0 106 43.4
Rhsim08G0177800 Rhododendron simsii HOM05D008921 ORTHO05D010506 4.7e-13 78.2 103 43.7
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 1.0e-12 77.0 113 38.1
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 3.0e-12 75.5 109 40.4
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 1.2e-11 73.6 114 38.6
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 3.4e-11 72.0 133 39.8
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 5.7e-11 71.2 130 38.5
Eucgr.K02789 Eucalyptus grandis HOM05D042355 ORTHO05D010506 9.8e-11 70.5 119 37.0
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 2.2e-10 69.3 112 36.6
Eucgr.B00219 Eucalyptus grandis HOM05D008921 ORTHO05D010506 2.2e-10 69.3 123 35.0
Eucgr.K02790 Eucalyptus grandis HOM05D042355 ORTHO05D010506 2.2e-10 69.3 108 36.1
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 4.8e-10 68.2 113 38.1
Gohir.A03G057050 Gossypium hirsutum HOM05D008921 ORTHO05D010506 2.4e-09 65.9 121 38.0
GSVIVG01007644001 Vitis vinifera HOM05D008921 ORTHO05D010506 4.1e-09 65.1 112 35.7
Eucgr.K02796 Eucalyptus grandis HOM05D042355 ORTHO05D010506 5.4e-09 64.7 109 35.8
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 9.1e-09 63.9 121 38.0
FvH4_5g06300 Fragaria vesca HOM05D008921 ORTHO05D010506 1.2e-08 63.5 121 33.9
FAN18G0512 Fragaria x ananassa HOM05D008921 ORTHO05D010506 1.2e-08 63.5 121 33.9
FAN08G0942 Fragaria x ananassa HOM05D008921 ORTHO05D010506 2.7e-08 62.4 124 33.9
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 2.7e-08 62.4 119 32.8
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 5.9e-08 61.2 118 33.9
FAN04G2975 Fragaria x ananassa HOM05D008921 ORTHO05D010506 1.3e-07 60.1 121 33.1
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 1.3e-07 60.1 118 33.1
RcHm_v2.0_Chr7g0192561 Rosa chinensis HOM05D008921 ORTHO05D010506 2.3e-07 59.3 126 30.2
Migut.D02003 Erythranthe guttata HOM05D024513 ORTHO05D010506 8.6e-07 57.4 118 35.6


User provided reference genes

Program Settings