Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001555g0110 Nicotiana tabacum HOM05D003638 ORTHO05D003202 6.4e-76 287.3 146 100.0
Nitab4.5_0001021g0100 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.6e-66 256.1 141 91.5
PGSC0003DMG400030735 Solanum tuberosum HOM05D003638 ORTHO05D003202 1.6e-55 219.5 147 78.2
Solyc07g007180.4 Solanum lycopersicum HOM05D003638 ORTHO05D003202 1.3e-49 199.9 147 74.1
Sopen07g003230 Solanum pennellii HOM05D003638 ORTHO05D003202 1.5e-48 196.4 147 73.5
Peaxi162Scf00391g00113 Petunia axillaris HOM05D003638 ORTHO05D003202 2.7e-34 149.1 113 74.3
Nitab4.5_0001555g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.9e-19 99.8 137 48.2
PGSC0003DMG401030736 Solanum tuberosum HOM05D003638 ORTHO05D003202 7.2e-19 97.8 131 48.1
Peaxi162Scf00391g00019 Petunia axillaris HOM05D003638 ORTHO05D003202 9.4e-19 97.4 137 48.2
Actinidia04244 Actinidia chinensis HOM05D003638 ORTHO05D003202 4.7e-18 95.1 130 42.3
Solyc07g007160.3 Solanum lycopersicum HOM05D003638 ORTHO05D003202 6.1e-18 94.7 131 46.6
Nitab4.5_0001751g0040 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.0e-17 94.0 128 46.9
Sopen07g003210 Solanum pennellii HOM05D003638 ORTHO05D003202 1.4e-17 93.6 131 45.8
Peaxi162Scf00108g00110 Petunia axillaris HOM05D003638 ORTHO05D003202 1.8e-17 93.2 134 46.3
Potri.018G114500 Populus trichocarpa HOM05D003638 ORTHO05D003202 6.7e-17 91.3 180 35.0
Actinidia21912 Actinidia chinensis HOM05D003638 ORTHO05D003202 4.4e-16 88.6 178 32.0
Thecc.09G141300 Theobroma cacao HOM05D003638 ORTHO05D003202 1.3e-15 87.0 126 40.5
CiPaw.16G118000 Carya illinoinensis HOM05D003638 ORTHO05D003202 2.2e-15 86.3 115 42.6
MELO3C004441.2 Cucumis melo HOM05D003638 ORTHO05D003202 2.8e-15 85.9 182 34.6
Manes.06G041300 Manihot esculenta HOM05D003638 ORTHO05D003202 3.7e-15 85.5 176 34.1
Ah.14g078720 Amaranthus hybridus HOM05D003638 ORTHO05D003202 4.8e-15 85.1 139 42.4
ClCG02G017240 Citrullus lanatus HOM05D003638 ORTHO05D003202 6.3e-15 84.7 180 35.0
CiPaw.15G182800 Carya illinoinensis HOM05D003638 ORTHO05D003202 8.2e-15 84.3 144 36.8
Nitab4.5_0001021g0080 Nicotiana tabacum HOM05D003638 ORTHO05D003202 8.2e-15 84.3 122 45.1
CsaV3_2G003550 Cucumis sativus L. HOM05D003638 ORTHO05D003202 4.1e-14 82.0 139 37.4
TWI63G0270 Tripterygium wilfordii HOM05D003638 ORTHO05D003202 4.1e-14 82.0 108 45.4
Nitab4.5_0005330g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 5.3e-14 81.6 165 39.4
Ciclev10009499m.g Citrus clementina HOM05D003638 ORTHO05D003202 7.0e-14 81.3 129 39.5
Gohir.A08G095362 Gossypium hirsutum HOM05D003638 ORTHO05D003202 7.0e-14 81.3 126 39.7
Sed0014564 Sechium edule HOM05D003638 ORTHO05D003202 7.0e-14 81.3 121 41.3
Cc06_g07440 Coffea canephora HOM05D003638 ORTHO05D003202 1.6e-13 80.1 132 41.7
Duzib168G1473 Durio zibethinus HOM05D003638 ORTHO05D003202 1.6e-13 80.1 131 40.5
vmacro21884 Vaccinium macrocarpon HOM05D003638 ORTHO05D003202 1.6e-13 80.1 135 40.0
arahy.Tifrunner.gnm1.ann1.ZD4V4J Arachis hypogaea HOM05D003638 ORTHO05D003202 2.0e-13 79.7 172 32.6
Dinv41427 Davidia involucrata HOM05D003638 ORTHO05D003202 2.0e-13 79.7 136 40.4
Peaxi162Scf00108g00012 Petunia axillaris HOM05D000082 ORTHO05D003202 2.0e-13 79.7 62 64.5
RcHm_v2.0_Chr2g0086711 Rosa chinensis HOM05D003638 ORTHO05D003202 2.0e-13 79.7 149 33.6
C07p08290 Brassica napus HOM05D003638 ORTHO05D003202 2.6e-13 79.3 124 42.7
BolC7t41242H Brassica oleracea HOM05D003638 ORTHO05D003202 2.6e-13 79.3 124 42.7
BraA07t28311Z Brassica rapa HOM05D003638 ORTHO05D003202 2.6e-13 79.3 124 42.7
Gorai.004G114100 Gossypium raimondii HOM05D003638 ORTHO05D003202 2.6e-13 79.3 121 38.8
Gohir.D08G106900 Gossypium hirsutum HOM05D003638 ORTHO05D003202 3.5e-13 79.0 121 38.0
FAN23G0723 Fragaria x ananassa HOM05D003638 ORTHO05D003202 4.5e-13 78.6 153 34.0
FAN26G1151 Fragaria x ananassa HOM05D003638 ORTHO05D003202 5.9e-13 78.2 153 32.7
Potri.006G190300 Populus trichocarpa HOM05D003638 ORTHO05D003202 5.9e-13 78.2 192 29.7
QL02p091197 Quercus lobata HOM05D003638 ORTHO05D003202 5.9e-13 78.2 111 42.3
EL10Ac8g18824 Beta vulgaris HOM05D003638 ORTHO05D003202 7.7e-13 77.8 137 39.4
BcaB03g16305 Brassica carinata HOM05D003638 ORTHO05D003202 1.0e-12 77.4 122 44.3
Phvul.009G209800 Phaseolus vulgaris HOM05D003638 ORTHO05D003202 1.0e-12 77.4 171 33.3
arahy.Tifrunner.gnm1.ann1.8W4I3Q Arachis hypogaea HOM05D003638 ORTHO05D003202 1.3e-12 77.0 172 32.0
BcaC06g36068 Brassica carinata HOM05D003638 ORTHO05D003202 1.3e-12 77.0 108 44.4
CSS0017335 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 1.3e-12 77.0 128 39.8
Cpa.g.sc46.85 Carica papaya HOM05D003638 ORTHO05D003202 1.3e-12 77.0 114 41.2
Glyma.09G096300 Glycine max HOM05D003638 ORTHO05D003202 1.7e-12 76.6 172 32.6
Eucgr.C04088 Eucalyptus grandis HOM05D003638 ORTHO05D003202 2.2e-12 76.3 122 38.5
FvH4_1g01750 Fragaria vesca HOM05D003638 ORTHO05D003202 2.2e-12 76.3 153 33.3
Lsat_1_v5_gn_5_94401 Lactuca sativa HOM05D003638 ORTHO05D003202 2.2e-12 76.3 161 35.4
Hma1.2p1_0182F.1_g080450 Hydrangea macrophylla HOM05D003638 ORTHO05D003202 2.9e-12 75.9 139 38.8
Medtr2g461020 Medicago truncatula HOM05D003638 ORTHO05D003202 2.9e-12 75.9 125 40.8
Haze_19323 Corylus avellana HOM05D003638 ORTHO05D003202 5.0e-12 75.1 161 35.4
FAN28G0590 Fragaria x ananassa HOM05D003638 ORTHO05D003202 5.0e-12 75.1 153 33.3
Dinv22136 Davidia involucrata HOM05D003638 ORTHO05D003202 6.5e-12 74.7 126 41.3
ECA234G1438 Erigeron canadensis HOM05D003638 ORTHO05D003202 6.5e-12 74.7 152 36.2
Dinv42915 Davidia involucrata HOM05D003638 ORTHO05D003202 8.5e-12 74.3 125 40.8
Dinv43185 Davidia involucrata HOM05D003638 ORTHO05D003202 8.5e-12 74.3 125 40.8
Glyma.15G201800 Glycine max HOM05D003638 ORTHO05D003202 8.5e-12 74.3 171 31.6
Lalb_Chr23g0275841 Lupinus albus HOM05D003638 ORTHO05D003202 8.5e-12 74.3 124 36.3
Oeu051707.1 Olea europaea HOM05D003638 ORTHO05D003202 8.5e-12 74.3 129 42.6
Rhsim01G0052400 Rhododendron simsii HOM05D003638 ORTHO05D003202 8.5e-12 74.3 118 41.5
TAR626G0601 Trochodendron aralioides HOM05D003638 ORTHO05D003202 1.1e-11 73.9 147 33.3
Sp3g28870 Schrenkiella parvula HOM05D003638 ORTHO05D003202 1.5e-11 73.6 124 39.5
TPR.G25664 Trifolium pratense HOM05D003638 ORTHO05D003202 1.5e-11 73.6 131 38.2
Cfa020896 Carpinus fangiana HOM05D003638 ORTHO05D003202 1.9e-11 73.2 128 36.7
FAN19G2555 Fragaria x ananassa HOM05D003638 ORTHO05D003202 1.9e-11 73.2 153 32.7
Duzib187G0526 Durio zibethinus HOM05D003638 ORTHO05D003202 2.5e-11 72.8 123 40.7
MBI15_g25866_MAGBIO Magnolia biondii HOM05D003638 ORTHO05D003202 2.5e-11 72.8 177 31.1
vmacro21883 Vaccinium macrocarpon HOM05D003638 ORTHO05D003202 2.5e-11 72.8 113 38.1
A07p05140 Brassica napus HOM05D003638 ORTHO05D003202 3.2e-11 72.4 124 41.9
Aqoxy7G03537 Aquilegia oxysepala HOM05D003638 ORTHO05D003202 4.2e-11 72.0 119 37.0
MD15G1160000 Malus domestica HOM05D003638 ORTHO05D003202 4.2e-11 72.0 159 37.7
CARHR105850 Cardamine hirsuta HOM05D003638 ORTHO05D003202 5.5e-11 71.6 122 39.3
Sc08g0005730 Simmondsia chinensis HOM05D003638 ORTHO05D003202 5.5e-11 71.6 136 40.4
CSS0018942 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 7.2e-11 71.2 146 37.0
Lsat_1_v5_gn_8_63100 Lactuca sativa HOM05D003638 ORTHO05D003202 9.4e-11 70.9 114 37.7
CSS0003684 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 1.6e-10 70.1 146 36.3
HanXRQChr05g0137971 Helianthus annuus HOM05D003638 ORTHO05D003202 1.6e-10 70.1 115 37.4
Manes.14G138400 Manihot esculenta HOM05D003638 ORTHO05D003202 1.6e-10 70.1 137 37.2
Sabra18G0097400 Salix brachista HOM05D003638 ORTHO05D003202 1.6e-10 70.1 130 34.6
HanXRQChr10g0315321 Helianthus annuus HOM05D003638 ORTHO05D003202 2.1e-10 69.7 114 39.5
TAR383G0618 Trochodendron aralioides HOM05D003638 ORTHO05D003202 2.1e-10 69.7 130 34.6
PGR102G3190 Punica granatum HOM05D003638 ORTHO05D003202 2.7e-10 69.3 117 38.5
Thhalv10022864m.g Eutrema salsugineum HOM05D003638 ORTHO05D003202 3.6e-10 68.9 120 37.5
Lalb_Chr11g0072961 Lupinus albus HOM05D003638 ORTHO05D003202 3.6e-10 68.9 147 32.7
THA.LOC104808922 Tarenaya hassleriana HOM05D003638 ORTHO05D003202 4.7e-10 68.6 119 37.0
CANSAT11G2120 Cannabis sativa HOM05D003638 ORTHO05D003202 6.1e-10 68.2 184 32.6
Eucgr.C00438 Eucalyptus grandis HOM05D003638 ORTHO05D003202 6.1e-10 68.2 110 40.0
ECA236G1572 Erigeron canadensis HOM05D003638 ORTHO05D003202 8.0e-10 67.8 107 39.3
Gorai.013G237500 Gossypium raimondii HOM05D003638 ORTHO05D003202 1.0e-09 67.4 169 33.1
AL3G47340 Arabidopsis lyrata HOM05D003638 ORTHO05D003202 1.4e-09 67.0 124 38.7
Hund09319 Selenicereus undatus HOM05D003638 ORTHO05D003202 1.8e-09 66.6 133 35.3
Lj6g0008260 Lotus japonicus HOM05D003638 ORTHO05D003202 2.3e-09 66.2 126 36.5
MD02G1013200 Malus domestica HOM05D003638 ORTHO05D003202 2.3e-09 66.2 157 33.8
Duzib150G0024 Durio zibethinus HOM05D003638 ORTHO05D003202 3.0e-09 65.9 138 34.1
Gohir.A13G203100 Gossypium hirsutum HOM05D003638 ORTHO05D003202 5.2e-09 65.1 127 36.2
BcaB03g16307 Brassica carinata HOM05D003638 ORTHO05D003202 6.7e-09 64.7 115 42.6
Nn8g39712 Nelumbo nucifera HOM05D003638 ORTHO05D003202 6.7e-09 64.7 134 37.3
Gohir.D13G208400 Gossypium hirsutum HOM05D003638 ORTHO05D003202 1.5e-08 63.5 127 37.8
Lalb_Chr08g0233671 Lupinus albus HOM05D003638 ORTHO05D003202 1.5e-08 63.5 129 32.6
SGA_v2.0_scaffold278G46736 Striga asiatica HOM05D003638 ORTHO05D003202 2.6e-08 62.8 128 34.4
Carub.0003s2935 Capsella rubella HOM05D003638 ORTHO05D003202 4.4e-08 62.0 139 33.1
AT2G15580 Arabidopsis thaliana HOM05D003638 ORTHO05D003202 7.5e-08 61.2 125 37.6
MSTRG.6091 Avicennia marina HOM05D003638 ORTHO05D003202 7.5e-08 61.2 129 37.2
SGA_v2.0_scaffold17G07921 Striga asiatica HOM05D003638 ORTHO05D003202 1.3e-07 60.5 103 36.9
VMungo1309G1330 Vigna mungo HOM05D003638 ORTHO05D003202 2.2e-07 59.7 211 26.1
Dinv15785 Davidia involucrata HOM05D006145 ORTHO05D007241 2.4e-06 56.2 31 67.7
Zm00001eb374880 Zea mays HOM05D003638 ORTHO05D003202 4.1e-06 55.5 139 29.5


User provided reference genes

Program Settings