Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001552g0010 Nicotiana tabacum HOM05D008040 ORTHO05D010075 7.5e-135 483.8 236 100.0
Nitab4.5_0005142g0030 Nicotiana tabacum HOM05D008040 ORTHO05D010075 1.4e-75 287.0 318 51.6
Oeu045297.1 Olea europaea HOM05D008040 ORTHO05D010075 2.8e-28 129.8 266 36.8
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 5.6e-21 105.5 309 28.5
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 9.5e-21 104.8 325 27.7
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.2e-20 104.4 308 29.2
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 3.6e-20 102.8 308 28.9
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.5e-18 97.4 308 26.9
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.5e-18 97.4 312 26.6
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.4e-18 96.3 303 27.7
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 5.8e-18 95.5 322 26.1
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.9e-17 93.2 313 26.2
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 6.4e-17 92.0 302 27.2
vmacro17325 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 1.4e-16 90.9 320 25.6
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 4.1e-16 89.4 306 26.1
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 1.7e-14 84.0 175 30.3
TWI12G0410 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 5.6e-13 79.0 377 24.1
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 7.3e-13 78.6 356 23.0
QL04p017640 Quercus lobata HOM05D008040 ORTHO05D010075 9.5e-13 78.2 309 24.3
QL04p017690 Quercus lobata HOM05D008040 ORTHO05D010075 1.2e-12 77.8 304 24.7
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.8e-12 76.6 304 24.0
Ah.02g122840 Amaranthus hybridus HOM05D008040 ORTHO05D010075 4.7e-12 75.9 253 27.3
COL.COLO4_10419 Corchorus olitorius HOM05D026534 ORTHO05D010075 2.0e-10 70.5 290 24.1
Potri.013G109900 Populus trichocarpa HOM05D008040 ORTHO05D010075 2.0e-10 70.5 186 29.0
PSO761G0098 Papaver somniferum HOM05D008040 ORTHO05D010075 7.6e-10 68.6 300 26.0
Rhsim11G0097100 Rhododendron simsii HOM05D061936 ORTHO05D013267 7.6e-10 68.6 146 32.9
DCAR_021781 Daucus carota HOM05D008040 ORTHO05D010075 1.3e-09 67.8 137 30.7
QL09p019845 Quercus lobata HOM05D011629 ORTHO05D013267 1.7e-09 67.4 308 22.7
Rhsim11G0097300 Rhododendron simsii HOM05D061936 ORTHO05D010075 2.2e-09 67.0 146 32.2
COL.COLO4_14086 Corchorus olitorius HOM05D011629 ORTHO05D013267 1.9e-08 63.9 136 27.2
PSO339G3463 Papaver somniferum HOM05D008040 ORTHO05D010075 1.9e-08 63.9 289 24.9
COL.COLO4_14085 Corchorus olitorius HOM05D000206 ORTHO05D002863 3.2e-08 63.2 136 27.2
FAN05G0656 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.2e-08 61.6 138 31.9
PSO017G2897 Papaver somniferum HOM05D008040 ORTHO05D010075 1.6e-07 60.8 280 24.3
SGA_v2.0_scaffold147G36326 Striga asiatica HOM05D008040 ORTHO05D010075 2.1e-07 60.5 162 27.2
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 2.7e-07 60.1 271 24.0
TPR.G3308 Trifolium pratense HOM05D011629 ORTHO05D013267 4.6e-07 59.3 148 29.1
MBI05_g20724_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 1.3e-06 57.8 269 25.7
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 2.3e-06 57.0 169 26.0
QL04p017651 Quercus lobata HOM05D008040 ORTHO05D010075 2.3e-06 57.0 52 53.8
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 3.9e-06 56.2 42 52.4
Oeu045300.1 Olea europaea HOM05D008040 ORTHO05D013267 3.9e-06 56.2 99 39.4
Medtr3g011190 Medicago truncatula HOM05D011629 ORTHO05D013267 8.6e-06 55.1 115 29.6


User provided reference genes

Program Settings