Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001544g0160 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.9e-43 178.7 85 100.0
Duzib147G1186 Durio zibethinus HOM05D001177 ORTHO05D007091 3.4e-21 104.8 58 84.5
CiPaw.04G032700 Carya illinoinensis HOM05D001177 ORTHO05D007091 1.3e-20 102.8 58 82.8
Nitab4.5_0001031g0080 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.3e-20 102.8 58 81.0
Nitab4.5_0001863g0200 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.3e-20 102.8 58 81.0
Ciclev10017544m.g Citrus clementina HOM05D001177 ORTHO05D001507 2.2e-20 102.1 58 81.0
COL.COLO4_29271 Corchorus olitorius HOM05D001177 ORTHO05D007091 2.9e-20 101.7 58 81.0
RcHm_v2.0_Chr2g0174111 Rosa chinensis HOM05D001177 ORTHO05D007091 2.9e-20 101.7 58 81.0
Thecc.04G027000 Theobroma cacao HOM05D001177 ORTHO05D007091 2.9e-20 101.7 58 81.0
MD09G1017800 Malus domestica HOM05D001177 ORTHO05D007091 3.8e-20 101.3 58 81.0
MD17G1018600 Malus domestica HOM05D001177 ORTHO05D007091 3.8e-20 101.3 58 81.0
Manes.01G014100 Manihot esculenta HOM05D001177 ORTHO05D007091 3.8e-20 101.3 58 79.3
Nn3g16573 Nelumbo nucifera HOM05D001177 ORTHO05D007091 3.8e-20 101.3 58 81.0
QL02p073037 Quercus lobata HOM05D001177 ORTHO05D007091 3.8e-20 101.3 63 76.2
QL02p073106 Quercus lobata HOM05D001177 ORTHO05D007091 3.8e-20 101.3 63 76.2
PGSC0003DMG400006969 Solanum tuberosum HOM05D001177 ORTHO05D007091 3.8e-20 101.3 58 81.0
Atru.chr6.2479 Acer truncatum HOM05D001177 ORTHO05D007091 4.9e-20 100.9 58 79.3
Cc08_g11710 Coffea canephora HOM05D001177 ORTHO05D007091 4.9e-20 100.9 58 79.3
CsaV3_3G027350 Cucumis sativus L. HOM05D001177 ORTHO05D007091 4.9e-20 100.9 58 81.0
Lju41A46T90 Lonicera japonica HOM05D001177 ORTHO05D007091 4.9e-20 100.9 58 79.3
Prupe.3G299100 Prunus persica HOM05D001177 ORTHO05D001507 4.9e-20 100.9 63 77.8
Glyma.16G063400 Glycine max HOM05D001177 ORTHO05D007091 6.5e-20 100.5 58 79.3
Peaxi162Scf00420g00254 Petunia axillaris HOM05D001177 ORTHO05D007091 6.5e-20 100.5 58 79.3
TWI12G0650 Tripterygium wilfordii HOM05D001177 ORTHO05D007091 6.5e-20 100.5 69 73.9
TAR371G1081 Trochodendron aralioides HOM05D001177 ORTHO05D007091 6.5e-20 100.5 58 79.3
arahy.Tifrunner.gnm1.ann1.Q0SVNI Arachis hypogaea HOM05D001177 ORTHO05D007091 8.4e-20 100.1 58 79.3
arahy.Tifrunner.gnm1.ann1.R689L2 Arachis hypogaea HOM05D001177 ORTHO05D007091 8.4e-20 100.1 58 79.3
Cfa007285 Carpinus fangiana HOM05D001177 ORTHO05D007091 8.4e-20 100.1 58 79.3
Haze_14808 Corylus avellana HOM05D001177 ORTHO05D007091 8.4e-20 100.1 58 79.3
FvH4_6g52470 Fragaria vesca HOM05D001177 ORTHO05D007091 8.4e-20 100.1 58 79.3
FAN02G2178 Fragaria x ananassa HOM05D001177 ORTHO05D007091 8.4e-20 100.1 58 79.3
FAN14G2882 Fragaria x ananassa HOM05D001177 ORTHO05D007091 8.4e-20 100.1 58 79.3
Lalb_Chr14g0363031 Lupinus albus HOM05D001177 ORTHO05D007091 8.4e-20 100.1 56 82.1
CSS0005984 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 1.1e-19 99.8 58 79.3
CSS0031107 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 1.1e-19 99.8 58 79.3
FAN05G3425 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.1e-19 99.8 58 79.3
Solyc02g067970.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 1.1e-19 99.8 58 79.3
Sopen02g017100 Solanum pennellii HOM05D001177 ORTHO05D007091 1.1e-19 99.8 58 79.3
ClCG05G013200 Citrullus lanatus HOM05D001177 ORTHO05D007091 1.4e-19 99.4 58 79.3
MELO3C014848.2 Cucumis melo HOM05D001177 ORTHO05D007091 1.4e-19 99.4 51 88.2
DCAR_002963 Daucus carota HOM05D001177 ORTHO05D007091 1.4e-19 99.4 51 88.2
Gohir.A09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 1.4e-19 99.4 60 78.3
Gohir.D09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 1.4e-19 99.4 60 78.3
Gorai.006G037700 Gossypium raimondii HOM05D001177 ORTHO05D007091 1.4e-19 99.4 60 78.3
Lj1g0014156 Lotus japonicus HOM05D001177 ORTHO05D007091 1.4e-19 99.4 56 80.4
Hund24909 Selenicereus undatus HOM05D001177 ORTHO05D007091 1.4e-19 99.4 58 79.3
Nn4g22453 Nelumbo nucifera HOM05D001177 ORTHO05D007091 1.9e-19 99.0 58 79.3
Sc03g0007010 Simmondsia chinensis HOM05D001177 ORTHO05D007091 1.9e-19 99.0 54 85.2
Glyma.19G082000 Glycine max HOM05D001177 ORTHO05D007091 2.5e-19 98.6 58 77.6
Phvul.008G148200 Phaseolus vulgaris HOM05D001177 ORTHO05D007091 2.5e-19 98.6 58 75.9
Solyc02g093760.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 2.5e-19 98.6 54 83.3
Sopen02g038400 Solanum pennellii HOM05D001177 ORTHO05D007091 2.5e-19 98.6 54 83.3
PGSC0003DMG400020230 Solanum tuberosum HOM05D001177 ORTHO05D007091 2.5e-19 98.6 54 83.3
GSVIVG01003965001 Vitis vinifera HOM05D001177 ORTHO05D001507 2.5e-19 98.6 58 79.3
Actinidia36159 Actinidia chinensis HOM05D001177 ORTHO05D007091 3.2e-19 98.2 58 77.6
Dinv00599 Davidia involucrata HOM05D001177 ORTHO05D007091 3.2e-19 98.2 53 84.9
Medtr7g035445 Medicago truncatula HOM05D001177 ORTHO05D007091 3.2e-19 98.2 59 76.3
Peaxi162Scf00080g01722 Petunia axillaris HOM05D001177 ORTHO05D007091 3.2e-19 98.2 65 72.3
TPR.G9071 Trifolium pratense HOM05D001177 ORTHO05D007091 3.2e-19 98.2 54 81.5
Eucgr.I01697 Eucalyptus grandis HOM05D001177 ORTHO05D001507 4.2e-19 97.8 53 83.0
FAN09G0779 Fragaria x ananassa HOM05D001177 ORTHO05D007091 4.2e-19 97.8 58 75.9
FAN09G4850 Fragaria x ananassa HOM05D001177 ORTHO05D007091 4.2e-19 97.8 58 75.9
vmacro05919 Vaccinium macrocarpon HOM05D001177 ORTHO05D007091 4.2e-19 97.8 54 81.5
Duzib187G1086 Durio zibethinus HOM05D001177 ORTHO05D007091 5.5e-19 97.4 58 77.6
HanXRQChr09g0255621 Helianthus annuus HOM05D001177 ORTHO05D007091 5.5e-19 97.4 51 84.3
Psat3g169040 Pisum sativum HOM05D001177 ORTHO05D007091 7.1e-19 97.1 59 74.6
Sc03g0006890 Simmondsia chinensis HOM05D001177 ORTHO05D007091 7.1e-19 97.1 54 83.3
TAR446G0002 Trochodendron aralioides HOM05D001177 ORTHO05D007091 7.1e-19 97.1 56 80.4
unitig_21.g20485 Utricularia gibba HOM05D001177 ORTHO05D007091 7.1e-19 97.1 58 75.9
Ah.02g130620 Amaranthus hybridus HOM05D001177 ORTHO05D007091 9.3e-19 96.7 56 76.8
Aqoxy5G03563 Aquilegia oxysepala HOM05D001177 ORTHO05D007091 9.3e-19 96.7 56 76.8
Aa31LG2G5370 Aethionema arabicum HOM05D001177 ORTHO05D001507 1.2e-18 96.3 54 81.5
AT3G27330 Arabidopsis thaliana HOM05D001177 ORTHO05D001507 1.2e-18 96.3 56 78.6
A02p35380 Brassica napus HOM05D001177 ORTHO05D007091 1.2e-18 96.3 61 72.1
Ca_06569_v3 Cicer arietinum L. HOM05D001177 ORTHO05D007091 1.2e-18 96.3 51 82.4
ECA232G2553 Erigeron canadensis HOM05D001177 ORTHO05D007091 1.2e-18 96.3 53 79.2
MBI11_g40895_MAGBIO Magnolia biondii HOM05D001177 ORTHO05D007091 1.2e-18 96.3 70 65.7
Sp2g16520 Schrenkiella parvula HOM05D001177 ORTHO05D001507 1.2e-18 96.3 58 75.9
AL5G16650 Arabidopsis lyrata HOM05D001177 ORTHO05D001507 1.6e-18 95.9 56 78.6
EL10Ac6g13445 Beta vulgaris HOM05D001177 ORTHO05D007091 1.6e-18 95.9 56 75.0
Thhalv10003629m.g Eutrema salsugineum HOM05D001177 ORTHO05D001507 1.6e-18 95.9 58 74.1
Lsat_1_v5_gn_4_183800 Lactuca sativa HOM05D001177 ORTHO05D007091 1.6e-18 95.9 51 80.4
Carub.0005s0563 Capsella rubella HOM05D001177 ORTHO05D001507 2.1e-18 95.5 70 67.1
Oeu048591.1 Olea europaea HOM05D001177 ORTHO05D007091 2.1e-18 95.5 56 80.4
Potri.001G336832 Populus trichocarpa HOM05D001177 ORTHO05D007091 2.1e-18 95.5 70 64.3
C02p54100 Brassica napus HOM05D001177 ORTHO05D001507 2.7e-18 95.1 61 70.5
BolC2t11472H Brassica oleracea HOM05D001177 ORTHO05D001507 2.7e-18 95.1 61 70.5
Migut.H00054 Erythranthe guttata HOM05D001177 ORTHO05D007091 2.7e-18 95.1 56 76.8
Rhsim10G0011600 Rhododendron simsii HOM05D001177 ORTHO05D007091 2.7e-18 95.1 54 77.8
Sed0005287 Sechium edule HOM05D001177 ORTHO05D007091 2.7e-18 95.1 55 76.4
CARHR148650 Cardamine hirsuta HOM05D001177 ORTHO05D001507 3.5e-18 94.7 54 79.6
SHI03853 Sapria himalayana HOM05D001177 ORTHO05D007091 3.5e-18 94.7 67 70.1
CANSAT64G1259 Cannabis sativa HOM05D001177 ORTHO05D007091 6.0e-18 94.0 58 74.1
Sed0019906 Sechium edule HOM05D001177 ORTHO05D007091 6.0e-18 94.0 55 76.4
Gohir.D11G069600 Gossypium hirsutum HOM05D001177 ORTHO05D007091 7.9e-18 93.6 55 81.8
Gorai.007G074400 Gossypium raimondii HOM05D001177 ORTHO05D007091 7.9e-18 93.6 55 81.8
Nitab4.5_0001544g0170 Nicotiana tabacum HOM05D001177 ORTHO05D007091 7.9e-18 93.6 54 81.5
THA.LOC104805349 Tarenaya hassleriana HOM05D001177 ORTHO05D007091 1.8e-17 92.4 56 76.8
Nitab4.5_0005414g0040 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.3e-17 92.0 56 76.8
PSO063G4178 Papaver somniferum HOM05D001177 ORTHO05D007091 2.3e-17 92.0 58 72.4
Zm00001eb111820 Zea mays HOM05D001177 ORTHO05D007091 2.3e-17 92.0 51 80.4
CDE07G0753 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 3.0e-17 91.7 70 62.9
Thecc.04G025000 Theobroma cacao HOM05D001177 ORTHO05D007091 3.0e-17 91.7 58 72.4
ECA232G2835 Erigeron canadensis HOM05D003414 ORTHO05D003913 3.9e-17 91.3 53 75.5
Sabra16G0217700 Salix brachista HOM05D001177 ORTHO05D007091 3.9e-17 91.3 51 76.5
Os12g0267900 Oryza sativa ssp. japonica HOM05D001177 ORTHO05D007091 6.7e-17 90.5 51 78.4
PSO017G0460 Papaver somniferum HOM05D001177 ORTHO05D007091 8.7e-17 90.1 58 70.7
PSO384G2778 Papaver somniferum HOM05D001177 ORTHO05D007091 8.7e-17 90.1 58 70.7
Zm00001eb331370 Zea mays HOM05D001177 ORTHO05D007091 8.7e-17 90.1 71 60.6
Gohir.A11G065300 Gossypium hirsutum HOM05D001177 ORTHO05D007091 1.5e-16 89.4 55 78.2
Nitab4.5_0005587g0090 Nicotiana tabacum HOM05D001177 ORTHO05D007091 3.3e-16 88.2 70 65.7
PGR083G2095 Punica granatum HOM05D001177 ORTHO05D007091 7.4e-16 87.0 54 75.9
ATR0824G077 Amborella trichopoda HOM05D001177 ORTHO05D007091 1.3e-15 86.3 51 70.6
PSO339G1540 Papaver somniferum HOM05D001177 ORTHO05D007091 1.3e-15 86.3 58 67.2
SGA_v2.0_scaffold135G34937 Striga asiatica HOM05D001177 ORTHO05D007091 4.8e-15 84.3 54 75.9
HPP92_004596 Vanilla planifolia HOM05D001177 ORTHO05D007091 1.8e-14 82.4 69 58.0
SEGI_15562 Sequoiadendron giganteum HOM05D001177 ORTHO05D007091 1.1e-11 73.2 56 55.4
Mapoly0006s0009 Marchantia polymorpha HOM05D001177 ORTHO05D007091 7.2e-11 70.5 53 58.5
Pp3c9_11850 Physcomitrium patens HOM05D001177 ORTHO05D007091 9.4e-11 70.1 60 53.3
Pp3c9_11853 Physcomitrium patens HOM05D001177 ORTHO05D007091 9.4e-11 70.1 60 53.3
Medtr7g035455 Medicago truncatula HOM05D001177 ORTHO05D007091 2.7e-10 68.6 65 53.8
Medtr0044s0160 Medicago truncatula HOM05D001177 ORTHO05D007091 6.1e-10 67.4 59 54.2
CBR_g51805 Chara braunii HOM05D001177 ORTHO05D007091 3.9e-09 64.7 55 56.4
Lj2g0025677 Lotus japonicus HOM05D005483 ORTHO05D007091 1.5e-08 62.8 54 64.8
Medtr1g093975 Medicago truncatula HOM05D001177 ORTHO05D007091 1.5e-08 62.8 58 48.3
Medtr1g094005 Medicago truncatula HOM05D001177 ORTHO05D007091 1.5e-08 62.8 58 48.3
CDE04G1204 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 1.7e-07 59.3 57 61.4
C07p39030 Brassica napus HOM05D001177 ORTHO05D007091 1.8e-06 55.8 68 45.6
Nn6g31539 Nelumbo nucifera HOM05D001177 ORTHO05D007091 3.1e-06 55.1 34 73.5
BcaC03g14536 Brassica carinata HOM05D001177 ORTHO05D007091 5.3e-06 54.3 64 46.9


User provided reference genes

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