Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001542g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.3e-70 266.9 151 100.0
Nitab4.5_0000668g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-37 159.8 104 74.0
Nitab4.5_0000154g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-32 143.3 85 81.2
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 4.5e-24 115.2 96 58.3
Nitab4.5_0003141g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.2e-22 108.6 91 57.1
Nitab4.5_0000562g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.7e-19 98.2 104 47.1
Nitab4.5_0004481g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.2e-18 94.4 79 54.4
CAN.G211.11 Capsicum annuum HOM05D013683 ORTHO05D014550 1.4e-17 93.6 61 67.2
Nitab4.5_0007527g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-16 90.1 82 50.0
Nitab4.5_0006547g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.0e-15 85.1 82 46.3
Nitab4.5_0000386g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.5e-14 82.8 65 50.8
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 3.2e-14 82.4 114 40.4
arahy.Tifrunner.gnm1.ann1.2XU2QD Arachis hypogaea HOM05D002954 ORTHO05D003353 5.5e-14 81.6 82 50.0
Nitab4.5_0006077g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.2e-13 80.5 108 41.7
Sopen09g020900 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-12 74.3 65 52.3
Lalb_Chr22g0358521 Lupinus albus HOM05D002954 ORTHO05D003353 1.2e-11 73.9 101 41.6
PGSC0003DMG400040446 Solanum tuberosum HOM05D002954 ORTHO05D003353 1.5e-11 73.6 103 38.8
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 2.6e-11 72.8 109 38.5
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 5.7e-11 71.6 109 38.5
Nitab4.5_0001155g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-10 70.5 61 67.2
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.8e-10 69.3 80 37.5
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.8e-10 69.3 80 37.5
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.8e-10 68.6 75 44.0
arahy.Tifrunner.gnm1.ann1.WG3QGY Arachis hypogaea HOM05D002954 ORTHO05D003353 8.2e-10 67.8 109 36.7
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 1.1e-09 67.4 103 35.9
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 1.4e-09 67.0 109 35.8
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 3.1e-09 65.9 80 40.0
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.3e-09 65.1 80 36.2
Nitab4.5_0000712g0160 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.0e-09 64.7 82 35.4
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 9.1e-09 64.3 79 39.2
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 9.1e-09 64.3 75 40.0
Psat4g174600 Pisum sativum HOM05D002954 ORTHO05D003353 9.1e-09 64.3 82 39.0
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.2e-08 63.9 75 41.3
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 1.6e-08 63.5 87 40.2
Nitab4.5_0000074g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-08 63.5 83 38.6
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.6e-08 63.5 75 42.7
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 2.0e-08 63.2 87 40.2
Sopen01g012110 Solanum pennellii HOM05D002954 ORTHO05D003353 2.0e-08 63.2 74 40.5
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 2.7e-08 62.8 81 39.5
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 2.7e-08 62.8 67 41.8
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.5e-08 62.0 78 38.5
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 4.5e-08 62.0 156 28.2
Psat0s2247g0040 Pisum sativum HOM05D002954 ORTHO05D017747 1.7e-07 60.1 72 40.3
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 1.7e-07 60.1 93 34.4
CAN.G135.13 Capsicum annuum HOM05D013683 ORTHO05D014550 1.5e-06 57.0 42 61.9
arahy.Tifrunner.gnm1.ann1.0IB4TY Arachis hypogaea HOM05D002954 ORTHO05D003353 1.9e-06 56.6 77 33.8
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 4.2e-06 55.5 105 32.4


User provided reference genes

Program Settings