Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 1.2e-83 313.2 156 100.0
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.1e-57 226.9 187 65.2
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 1.1e-46 190.3 154 67.5
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 5.6e-46 188.0 154 66.9
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.7e-45 185.3 184 54.3
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 4.9e-42 174.9 159 58.5
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 1.6e-40 169.9 154 64.9
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 3.0e-39 165.6 154 61.7
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 6.7e-39 164.5 154 59.7
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 3.1e-36 155.6 154 53.9
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.1e-36 155.6 154 55.8
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.0e-35 152.9 154 55.2
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 2.6e-35 152.5 155 55.5
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 2.6e-35 152.5 154 53.2
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 4.5e-35 151.8 154 57.1
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.3e-34 150.2 160 53.8
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 1.7e-34 149.8 155 55.5
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 1.7e-34 149.8 155 54.8
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 3.8e-34 148.7 154 54.5
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 8.5e-34 147.5 154 54.5
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 2.5e-33 146.0 154 53.9
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 4.2e-33 145.2 160 51.9
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 4.2e-33 145.2 152 53.9
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 4.2e-33 145.2 154 51.3
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 7.2e-33 144.4 154 50.6
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 7.2e-33 144.4 153 54.2
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 9.4e-33 144.1 154 50.6
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 9.4e-33 144.1 154 53.9
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.6e-32 143.3 154 50.6
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 2.1e-32 142.9 153 51.6
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 2.7e-32 142.5 154 51.3
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 2.7e-32 142.5 152 53.3
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 4.6e-32 141.7 154 53.9
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 6.1e-32 141.4 155 51.6
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 1.0e-31 140.6 154 52.6
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 1.4e-31 140.2 156 53.8
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 3.0e-31 139.0 155 54.2
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 5.1e-31 138.3 152 53.9
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 2.0e-30 136.3 149 53.0
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 2.5e-30 136.0 154 48.7
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 5.7e-30 134.8 152 53.3
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 5.7e-30 134.8 155 52.9
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 9.7e-30 134.0 152 52.0
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.3e-29 133.7 156 52.6
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.7e-29 133.3 156 53.8
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.2e-29 132.9 165 49.1
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.8e-29 132.5 136 58.1
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 6.3e-29 131.3 157 51.6
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 6.3e-29 131.3 154 50.6
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 8.2e-29 131.0 155 47.7
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 1.1e-28 130.6 156 51.3
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.4e-28 130.2 148 52.0
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 1.4e-28 130.2 151 54.3
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 1.8e-28 129.8 136 58.1
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 6.9e-28 127.9 159 47.2
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 6.9e-28 127.9 154 51.3
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 6.9e-28 127.9 154 48.7
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 9.1e-28 127.5 153 51.0
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 1.2e-27 127.1 149 51.7
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 2.6e-27 125.9 155 50.3
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 2.6e-27 125.9 152 50.0
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 6.5e-26 121.3 193 44.0
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 5.5e-25 118.2 154 48.1
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 9.4e-25 117.5 151 47.7
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 1.2e-24 117.1 154 48.1
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 1.2e-24 117.1 124 55.6
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 2.1e-24 116.3 137 47.4
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 2.1e-24 116.3 145 45.5
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 2.7e-24 115.9 150 48.0
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 2.7e-24 115.9 194 43.3
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 4.7e-24 115.2 154 48.1
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 6.1e-24 114.8 153 46.4
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 6.1e-24 114.8 155 47.1
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 7.9e-24 114.4 151 47.0
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 1.0e-23 114.0 144 45.8
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 2.3e-23 112.8 151 46.4
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 2.3e-23 112.8 149 47.7
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 3.0e-23 112.5 154 47.4
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 3.0e-23 112.5 154 46.8
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 5.1e-23 111.7 146 45.9
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 5.1e-23 111.7 90 61.1
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 6.7e-23 111.3 153 47.7
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 4.4e-22 108.6 154 46.1
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 7.4e-22 107.8 153 48.4
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 7.4e-22 107.8 145 47.6
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 1.7e-21 106.7 171 43.3
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 1.7e-21 106.7 152 46.1
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 2.2e-21 106.3 155 46.5
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 6.3e-21 104.8 152 45.4
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 8.2e-21 104.4 154 44.8
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 1.4e-20 103.6 117 46.2
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 1.4e-20 103.6 152 42.1
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 5.3e-20 101.7 53 81.1
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 5.3e-20 101.7 116 47.4
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 5.3e-20 101.7 157 43.3
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 7.7e-19 97.8 101 59.4
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 7.7e-19 97.8 140 45.7
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 2.2e-18 96.3 120 41.7
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 6.5e-18 94.7 109 44.0
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 3.6e-16 89.0 113 44.2
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 8.0e-16 87.8 136 37.5
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.0e-15 87.4 168 39.3
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 8.2e-13 77.8 92 50.0
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.4e-12 77.0 89 43.8
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 1.8e-12 76.6 117 37.6
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 2.2e-10 69.7 100 47.0
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 2.9e-10 69.3 83 50.6
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 3.6e-08 62.4 65 55.4
FAN27G0088 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.6e-06 56.2 58 55.2


User provided reference genes

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