Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001538g0010 Nicotiana tabacum HOM05D003436 ORTHO05D003674 9.4e-38 159.8 89 100.0
Nitab4.5_0000105g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 3.8e-31 137.9 89 89.9
Nitab4.5_0000105g0080 Nicotiana tabacum HOM05D003436 ORTHO05D003674 8.5e-31 136.7 89 89.9
PGSC0003DMG400011438 Solanum tuberosum HOM05D003436 ORTHO05D003674 1.6e-16 89.4 87 65.5
CAN.G1161.30 Capsicum annuum HOM05D003436 ORTHO05D003674 1.3e-15 86.3 68 73.5
Solyc10g078770.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 5.0e-15 84.3 68 73.5
Sopen10g029390 Solanum pennellii HOM05D003436 ORTHO05D003674 5.0e-15 84.3 68 73.5
THA.LOC104826769 Tarenaya hassleriana HOM05D003436 ORTHO05D003674 5.0e-15 84.3 95 61.1
Migut.J01829 Erythranthe guttata HOM05D003436 ORTHO05D003674 6.6e-15 84.0 150 43.3
SalBow4G2804 Salvia bowleyana HOM05D003436 ORTHO05D003674 4.2e-14 81.3 88 63.6
Nitab4.5_0008334g0040 Nicotiana tabacum HOM05D003436 ORTHO05D003674 5.5e-14 80.9 67 70.1
SGA_v2.0_scaffold105G30485 Striga asiatica HOM05D003436 ORTHO05D003674 5.5e-14 80.9 98 55.1
Nitab4.5_0000324g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 7.2e-14 80.5 63 71.4
QL07p023622 Quercus lobata HOM05D003436 ORTHO05D003674 2.8e-13 78.6 78 61.5
Glyma.03G144400 Glycine max HOM05D003436 ORTHO05D003674 4.7e-13 77.8 91 56.0
SalBow1G8531 Salvia bowleyana HOM05D003436 ORTHO05D003674 4.7e-13 77.8 82 59.8
Psat0s797g0160 Pisum sativum HOM05D003436 ORTHO05D003674 1.0e-12 76.6 92 55.4
Aa31sc24G30 Aethionema arabicum HOM05D003436 ORTHO05D003674 2.3e-12 75.5 85 56.5
Medtr7g093170 Medicago truncatula HOM05D003436 ORTHO05D003674 5.2e-12 74.3 91 56.0
BcaC06g32544 Brassica carinata HOM05D003436 ORTHO05D003674 6.8e-12 73.9 63 65.1
Cpa.g.sc85.72 Carica papaya HOM05D003436 ORTHO05D003674 6.8e-12 73.9 84 57.1
Peaxi162Scf00003g04337 Petunia axillaris HOM05D003436 ORTHO05D003674 8.9e-12 73.6 96 55.2
GSVIVG01033503001 Vitis vinifera HOM05D003436 ORTHO05D003674 8.9e-12 73.6 88 54.5
A10p29610 Brassica napus HOM05D003436 ORTHO05D003674 1.2e-11 73.2 61 67.2
C09p69990 Brassica napus HOM05D003436 ORTHO05D003674 1.2e-11 73.2 61 67.2
BolC9t59741H Brassica oleracea HOM05D003436 ORTHO05D003674 1.2e-11 73.2 61 67.2
BraA10t45003Z Brassica rapa HOM05D003436 ORTHO05D003674 1.2e-11 73.2 61 67.2
Ciclev10012978m.g Citrus clementina HOM05D003436 ORTHO05D003674 1.5e-11 72.8 87 52.9
BcaB01g06002 Brassica carinata HOM05D003436 ORTHO05D003674 2.0e-11 72.4 63 63.5
CANSAT64G0020 Cannabis sativa HOM05D003436 ORTHO05D003674 2.0e-11 72.4 88 56.8
Medtr1g053970 Medicago truncatula HOM05D003436 ORTHO05D003674 2.6e-11 72.0 96 52.1
BcaC06g32392 Brassica carinata HOM05D003436 ORTHO05D003674 3.4e-11 71.6 61 65.6
Dinv14293 Davidia involucrata HOM05D003436 ORTHO05D003674 3.4e-11 71.6 83 60.2
Sp6g36090 Schrenkiella parvula HOM05D003436 ORTHO05D003674 3.4e-11 71.6 61 65.6
Ca_25707_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 4.4e-11 71.2 99 47.5
Glyma.19G147200 Glycine max HOM05D003436 ORTHO05D003674 4.4e-11 71.2 83 57.8
Psat0s797g0240 Pisum sativum HOM05D003436 ORTHO05D003674 4.4e-11 71.2 94 51.1
Manes.08G044900 Manihot esculenta HOM05D003436 ORTHO05D003674 5.7e-11 70.9 109 48.6
Oeu034263.1 Olea europaea HOM05D008970 ORTHO05D003674 7.5e-11 70.5 84 58.3
TWI53G0478 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 7.5e-11 70.5 89 55.1
Aqoxy7G03903 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 9.8e-11 70.1 93 54.8
C03p03320 Brassica napus HOM05D003436 ORTHO05D003674 9.8e-11 70.1 85 52.9
BolC3t12875H Brassica oleracea HOM05D003436 ORTHO05D003674 9.8e-11 70.1 85 52.9
Phvul.001G143100 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 9.8e-11 70.1 98 51.0
TPR.G27745 Trifolium pratense HOM05D003436 ORTHO05D003674 9.8e-11 70.1 73 57.5
Medtr7g093160 Medicago truncatula HOM05D003436 ORTHO05D003674 1.3e-10 69.7 82 58.5
Actinidia22034 Actinidia chinensis HOM05D003436 ORTHO05D003674 2.2e-10 68.9 112 45.5
Potri.016G046350 Populus trichocarpa HOM05D003436 ORTHO05D003674 2.2e-10 68.9 83 54.2
RcHm_v2.0_Chr3g0479771 Rosa chinensis HOM05D003436 ORTHO05D003674 2.2e-10 68.9 85 56.5
VMungo1383G0252 Vigna mungo HOM05D003436 ORTHO05D003674 2.2e-10 68.9 63 65.1
AT5G06760 Arabidopsis thaliana HOM05D003436 ORTHO05D003674 2.8e-10 68.6 63 60.3
Medtr7g093140 Medicago truncatula HOM05D003436 ORTHO05D003674 2.8e-10 68.6 90 54.4
Carub.0006s0565 Capsella rubella HOM05D003436 ORTHO05D003674 3.7e-10 68.2 63 61.9
Ca_08518_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 3.7e-10 68.2 91 50.5
Lalb_Chr15g0078981 Lupinus albus HOM05D003436 ORTHO05D003674 3.7e-10 68.2 75 57.3
Prupe.7G076400 Prunus persica HOM05D003436 ORTHO05D003674 3.7e-10 68.2 86 54.7
CARHR206420 Cardamine hirsuta HOM05D003436 ORTHO05D003674 4.9e-10 67.8 63 63.5
FAN02G3232 Fragaria x ananassa HOM05D003436 ORTHO05D003674 4.9e-10 67.8 92 54.3
Phvul.001G142000 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 4.9e-10 67.8 98 50.0
AL6G16870 Arabidopsis lyrata HOM05D003436 ORTHO05D003674 6.3e-10 67.4 63 60.3
arahy.Tifrunner.gnm1.ann1.00VVAL Arachis hypogaea HOM05D003436 ORTHO05D003674 8.3e-10 67.0 85 51.8
FvH4_6g22410 Fragaria vesca HOM05D003436 ORTHO05D003674 8.3e-10 67.0 72 59.7
FAN14G5712 Fragaria x ananassa HOM05D003436 ORTHO05D003674 8.3e-10 67.0 72 59.7
Nitab4.5_0001538g0030 Nicotiana tabacum HOM05D003436 ORTHO05D003674 8.3e-10 67.0 80 55.0
TWI77G0090 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 8.3e-10 67.0 86 53.5
Ca_05483_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 1.1e-09 66.6 91 52.7
Psat3g068920 Pisum sativum HOM05D003436 ORTHO05D003674 1.1e-09 66.6 86 53.5
Atru.chr8.1096 Acer truncatum HOM05D003436 ORTHO05D003674 1.4e-09 66.2 91 49.5
MSTRG.19903 Avicennia marina HOM05D003436 ORTHO05D003674 1.4e-09 66.2 86 51.2
Dinv14294 Davidia involucrata HOM05D003436 ORTHO05D003674 1.4e-09 66.2 84 56.0
Peaxi162Scf00003g04347 Petunia axillaris HOM05D003436 ORTHO05D003674 1.4e-09 66.2 80 53.8
arahy.Tifrunner.gnm1.ann1.95S5ZX Arachis hypogaea HOM05D003436 ORTHO05D003674 1.8e-09 65.9 88 51.1
CsaV3_4G030630 Cucumis sativus L. HOM05D003436 ORTHO05D003674 1.8e-09 65.9 86 54.7
Peaxi162Scf00003g04336 Petunia axillaris HOM05D003436 ORTHO05D003674 1.8e-09 65.9 92 56.5
Rhsim03G0006400 Rhododendron simsii HOM05D003436 ORTHO05D003674 1.8e-09 65.9 93 47.3
VMungo1383G0066 Vigna mungo HOM05D003436 ORTHO05D003674 1.8e-09 65.9 84 53.6
BcaB01g06022 Brassica carinata HOM05D003436 ORTHO05D003674 2.4e-09 65.5 85 52.9
BcaB01g06026 Brassica carinata HOM05D003436 ORTHO05D003674 2.4e-09 65.5 85 52.9
Thhalv10014897m.g Eutrema salsugineum HOM05D003436 ORTHO05D003674 2.4e-09 65.5 63 58.7
CAN.G1161.31 Capsicum annuum HOM05D003436 ORTHO05D003674 4.1e-09 64.7 96 47.9
MELO3C008930.2 Cucumis melo HOM05D003436 ORTHO05D003674 4.1e-09 64.7 86 53.5
DCAR_013554 Daucus carota HOM05D003436 ORTHO05D003674 4.1e-09 64.7 98 53.1
Peaxi162Scf00258g00520 Petunia axillaris HOM05D003436 ORTHO05D003674 4.1e-09 64.7 83 51.8
Nitab4.5_0000105g0110 Nicotiana tabacum HOM05D003436 ORTHO05D003674 5.4e-09 64.3 96 49.0
Sabra16G0050300 Salix brachista HOM05D003436 ORTHO05D003674 5.4e-09 64.3 69 59.4
Cc06_g15980 Coffea canephora HOM05D003436 ORTHO05D003674 7.0e-09 63.9 89 49.4
Nitab4.5_0000105g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 7.0e-09 63.9 91 49.5
Psat6g120960 Pisum sativum HOM05D003436 ORTHO05D003674 7.0e-09 63.9 93 49.5
unitig_736.g22300 Utricularia gibba HOM05D000267 ORTHO05D000298 7.0e-09 63.9 91 53.8
unitig_899.g15079 Utricularia gibba HOM05D003436 ORTHO05D003674 7.0e-09 63.9 88 54.5
C03p03280 Brassica napus HOM05D003436 ORTHO05D003674 9.2e-09 63.5 93 50.5
Lj1g0001300 Lotus japonicus HOM05D003436 ORTHO05D003674 9.2e-09 63.5 129 41.1
PSO339G4457 Papaver somniferum HOM05D003436 ORTHO05D003674 9.2e-09 63.5 87 54.0
Sc19g0007020 Simmondsia chinensis HOM05D003436 ORTHO05D003674 9.2e-09 63.5 82 52.4
Thecc.05G170800 Theobroma cacao HOM05D003436 ORTHO05D003674 9.2e-09 63.5 80 53.8
TWI74G0976 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 9.2e-09 63.5 89 53.9
Sopen10g029400 Solanum pennellii HOM05D003436 ORTHO05D003674 1.2e-08 63.2 94 52.1
ATR0605G384 Amborella trichopoda HOM05D003436 ORTHO05D003674 1.6e-08 62.8 85 50.6
CDE06G2670 Ceratophyllum demersum HOM05D003436 ORTHO05D003674 1.6e-08 62.8 104 45.2
COL.COLO4_33990 Corchorus olitorius HOM05D011887 ORTHO05D003674 1.6e-08 62.8 82 53.7
PGSC0003DMG400011439 Solanum tuberosum HOM05D003436 ORTHO05D003674 1.6e-08 62.8 92 46.7
ClCG04G002110 Citrullus lanatus HOM05D003436 ORTHO05D003674 2.0e-08 62.4 98 50.0
Sed0019071 Sechium edule HOM05D003436 ORTHO05D003674 2.0e-08 62.4 80 51.2
GSVIVG01033505001 Vitis vinifera HOM05D003436 ORTHO05D003674 2.0e-08 62.4 84 53.6
MBI04_g14513_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 3.5e-08 61.6 96 47.9
Sed0015125 Sechium edule HOM05D003436 ORTHO05D003674 3.5e-08 61.6 85 49.4
Lalb_Chr04g0261031 Lupinus albus HOM05D003436 ORTHO05D003674 4.5e-08 61.2 95 47.4
MD12G1057800 Malus domestica HOM05D003436 ORTHO05D003674 4.5e-08 61.2 85 51.8
arahy.Tifrunner.gnm1.ann1.BAUA8N Arachis hypogaea HOM05D003436 ORTHO05D003674 5.9e-08 60.8 106 47.2
Lj5g0013312 Lotus japonicus HOM05D003436 ORTHO05D003674 5.9e-08 60.8 86 48.8
Nitab4.5_0000324g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 5.9e-08 60.8 87 50.6
Nitab4.5_0002343g0050 Nicotiana tabacum HOM05D003436 ORTHO05D003674 5.9e-08 60.8 91 50.5
PGSC0003DMG400011437 Solanum tuberosum HOM05D003436 ORTHO05D003674 7.8e-08 60.5 80 50.0
Oeu007767.1 Olea europaea HOM05D003436 ORTHO05D003674 1.0e-07 60.1 102 47.1
A03p02880 Brassica napus HOM05D003436 ORTHO05D003674 1.7e-07 59.3 86 51.2
BraA03t09652Z Brassica rapa HOM05D003436 ORTHO05D003674 1.7e-07 59.3 86 51.2
Nitab4.5_0008334g0020 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.7e-07 59.3 91 48.4
Solyc10g078780.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 1.7e-07 59.3 86 47.7
Actinidia32390 Actinidia chinensis HOM05D003436 ORTHO05D003674 2.3e-07 58.9 88 47.7
Oeu033740.1 Olea europaea HOM05D003436 ORTHO05D003674 2.9e-07 58.5 84 50.0
MBI04_g39831_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 3.9e-07 58.2 96 45.8
Cc06_g15970 Coffea canephora HOM05D003436 ORTHO05D003674 5.0e-07 57.8 80 56.2
DCAR_019788 Daucus carota HOM05D003436 ORTHO05D003674 5.0e-07 57.8 84 47.6
PSO017G1578 Papaver somniferum HOM05D003436 ORTHO05D003674 5.0e-07 57.8 94 42.6
vmacro07911 Vaccinium macrocarpon HOM05D003436 ORTHO05D003674 6.6e-07 57.4 85 48.2
ECA236G0537 Erigeron canadensis HOM05D003436 ORTHO05D003674 8.6e-07 57.0 64 54.7
Sopen10g029380 Solanum pennellii HOM05D003436 ORTHO05D003674 8.6e-07 57.0 80 47.5
ClCG10G017480 Citrullus lanatus HOM05D003436 ORTHO05D003674 1.1e-06 56.6 79 48.1
Solyc10g078760.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 1.1e-06 56.6 80 47.5
VMungo0720G0768 Vigna mungo HOM05D003436 ORTHO05D003674 1.1e-06 56.6 64 51.6
Eucgr.K01836 Eucalyptus grandis HOM05D003436 ORTHO05D003674 1.5e-06 56.2 85 50.6
HanXRQChr05g0132881 Helianthus annuus HOM05D003436 ORTHO05D003674 1.5e-06 56.2 97 47.4
Lsat_1_v5_gn_8_75321 Lactuca sativa HOM05D003436 ORTHO05D003674 1.5e-06 56.2 67 52.2
Ah.13g075890 Amaranthus hybridus HOM05D003436 ORTHO05D003674 2.5e-06 55.5 63 55.6
CAN.G1161.29 Capsicum annuum HOM05D003436 ORTHO05D003674 2.5e-06 55.5 111 36.9
Nn7g36015 Nelumbo nucifera HOM05D003436 ORTHO05D003674 2.5e-06 55.5 94 47.9
Aqoxy2G03681 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 3.3e-06 55.1 55 60.0
Aqoxy7G02037 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 3.3e-06 55.1 55 60.0
Gohir.D01G178300 Gossypium hirsutum HOM05D003436 ORTHO05D003674 3.3e-06 55.1 82 46.3
Gorai.002G224800 Gossypium raimondii HOM05D003436 ORTHO05D003674 3.3e-06 55.1 82 46.3
EL10Ac3g06923 Beta vulgaris HOM05D003436 ORTHO05D003674 5.6e-06 54.3 84 48.8
Gohir.A01G191700 Gossypium hirsutum HOM05D003436 ORTHO05D003674 5.6e-06 54.3 80 46.2
CsaV3_3G038880 Cucumis sativus L. HOM05D003436 ORTHO05D003674 7.3e-06 53.9 83 44.6
PSO170G2585 Papaver somniferum HOM05D003436 ORTHO05D003674 7.3e-06 53.9 94 40.4


User provided reference genes

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