Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 6.1e-302 1040.0 530 100.0
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 9.5e-279 963.0 585 87.4
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 3.1e-221 771.9 562 75.4
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 2.0e-212 742.7 561 73.6
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 1.7e-211 739.6 561 73.4
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 4.1e-173 612.1 581 59.4
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 5.4e-173 611.7 570 60.9
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 5.9e-172 608.2 513 65.7
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 7.8e-172 607.8 469 69.9
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 1.0e-171 607.4 537 62.8
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.3e-171 607.1 493 67.7
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 1.7e-171 606.7 513 65.5
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 8.6e-171 604.4 533 62.3
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 3.3e-170 602.4 573 60.6
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 1.6e-169 600.1 586 57.8
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 2.3e-168 596.3 522 63.0
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 2.3e-168 596.3 575 59.5
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 2.6e-167 592.8 547 61.4
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 7.5e-167 591.3 575 59.0
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 2.9e-166 589.3 562 58.7
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 3.7e-166 589.0 559 60.1
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 3.7e-166 589.0 559 59.9
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 4.9e-166 588.6 492 64.4
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 2.4e-165 586.3 558 59.9
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 7.0e-165 584.7 545 60.0
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 9.2e-165 584.3 560 61.2
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 4.6e-164 582.0 450 68.0
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 6.0e-164 581.6 563 57.2
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 7.8e-164 581.3 569 57.8
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 7.8e-164 581.3 539 59.6
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 7.8e-164 581.3 497 62.2
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 1.0e-163 580.9 559 58.9
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 1.3e-163 580.5 463 70.4
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 3.0e-163 579.3 543 59.7
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 3.9e-163 578.9 554 59.6
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 5.0e-163 578.6 534 61.8
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 1.1e-162 577.4 529 60.7
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 1.5e-162 577.0 565 57.9
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 3.3e-162 575.9 570 58.2
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 3.3e-162 575.9 522 60.9
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 3.3e-162 575.9 568 57.7
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 7.3e-162 574.7 565 58.2
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 9.5e-162 574.3 457 66.3
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 1.6e-161 573.5 548 59.5
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 2.8e-161 572.8 514 61.9
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 2.8e-161 572.8 507 61.7
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 3.6e-161 572.4 539 57.7
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 6.2e-161 571.6 560 57.7
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 8.1e-161 571.2 560 57.7
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 1.4e-160 570.5 574 57.7
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 1.8e-160 570.1 561 56.9
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 2.3e-160 569.7 566 58.1
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 2.3e-160 569.7 561 57.2
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 4.0e-160 568.9 515 59.8
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 8.9e-160 567.8 560 57.5
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 1.2e-159 567.4 523 60.6
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 2.0e-159 566.6 560 57.7
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 9.8e-159 564.3 564 56.7
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 2.2e-158 563.1 550 60.2
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 4.9e-158 562.0 449 65.7
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 6.4e-158 561.6 593 55.5
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 1.4e-157 560.5 469 64.6
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 1.9e-157 560.1 469 64.0
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 1.2e-156 557.4 556 56.5
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 1.2e-156 557.4 560 58.4
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 1.2e-156 557.4 453 64.7
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 1.6e-156 557.0 499 60.9
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 1.6e-156 557.0 555 56.4
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.1e-156 556.6 487 62.8
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 2.7e-156 556.2 490 63.1
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 3.5e-156 555.8 498 59.4
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 6.0e-156 555.1 489 61.8
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 6.0e-156 555.1 527 59.6
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 1.7e-155 553.5 520 60.6
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 1.7e-155 553.5 489 61.8
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 3.9e-155 552.4 479 62.2
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 3.9e-155 552.4 499 59.9
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 6.6e-155 551.6 489 61.3
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 6.6e-155 551.6 556 56.7
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 8.6e-155 551.2 519 59.9
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 8.6e-155 551.2 519 59.9
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 1.1e-154 550.8 519 59.9
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 1.5e-154 550.4 566 56.9
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 1.5e-154 550.4 473 63.4
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 1.9e-154 550.1 502 62.5
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 9.5e-154 547.7 495 59.6
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 1.2e-153 547.4 560 57.1
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 1.6e-153 547.0 537 58.5
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 1.6e-153 547.0 537 58.5
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 3.6e-153 545.8 563 55.8
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 3.6e-153 545.8 561 56.7
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 4.7e-153 545.4 484 61.8
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 4.7e-153 545.4 553 57.1
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 4.7e-153 545.4 553 57.1
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 4.7e-153 545.4 545 57.4
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 4.7e-153 545.4 555 56.0
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 6.2e-153 545.0 553 57.0
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 6.2e-153 545.0 553 57.0
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 6.2e-153 545.0 553 57.9
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 8.1e-153 544.7 500 60.2
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 3.1e-152 542.7 560 56.2
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 8.9e-152 541.2 555 56.2
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 1.2e-151 540.8 541 57.1
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 1.5e-151 540.4 606 52.0
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 2.0e-151 540.0 530 59.1
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 4.4e-151 538.9 547 58.0
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 5.8e-151 538.5 602 52.3
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 8.4e-150 534.6 448 62.5
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 2.4e-149 533.1 561 55.1
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 5.4e-149 531.9 535 59.4
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 2.3e-147 526.6 449 62.4
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 4.3e-146 522.3 445 65.8
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 1.6e-145 520.4 525 56.2
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.8e-144 516.9 453 60.9
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 3.1e-144 516.2 588 53.9
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 4.0e-144 515.8 550 54.0
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 1.5e-143 513.8 533 56.5
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 2.0e-143 513.5 396 67.9
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 1.7e-142 510.4 569 55.5
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 2.9e-142 509.6 473 59.6
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 1.0e-139 501.1 522 55.6
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 2.5e-138 496.5 549 54.5
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 1.4e-136 490.7 380 67.6
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 1.2e-135 487.6 554 53.1
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 3.4e-135 486.1 507 56.6
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 6.4e-134 481.9 526 51.9
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 5.4e-133 478.8 371 65.0
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 1.8e-131 473.8 503 54.5
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 5.1e-131 472.2 445 57.8
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 1.6e-129 467.2 524 48.7
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 3.7e-129 466.1 500 52.0
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 1.1e-128 464.5 408 64.0
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 1.5e-127 460.7 463 55.9
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 7.6e-127 458.4 452 53.8
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.9e-125 453.8 366 66.1
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.2e-124 451.1 437 60.2
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 1.0e-123 448.0 449 58.6
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 1.9e-122 443.7 382 62.3
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 2.1e-121 440.3 419 60.9
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 1.0e-118 431.4 354 65.8
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 6.5e-118 428.7 573 47.6
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 1.9e-117 427.2 373 61.9
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 1.0e-115 421.4 517 50.3
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 2.3e-115 420.2 302 79.1
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 2.9e-110 403.3 384 59.9
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 2.5e-109 400.2 504 49.4
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 2.7e-108 396.7 268 74.3
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 5.5e-101 372.5 382 53.1
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 3.0e-99 366.7 404 54.2
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 1.2e-82 311.6 237 67.9
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 1.8e-72 277.7 462 38.7
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 2.4e-72 277.3 279 58.1
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 2.0e-63 247.7 311 49.5
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 1.5e-61 241.5 279 54.8
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 6.4e-57 226.1 146 77.4
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 3.7e-49 200.3 213 49.8
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 9.2e-48 195.7 178 58.4
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 3.6e-44 183.7 235 51.5
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.7e-44 183.3 465 33.1
Haze_27058 Corylus avellana HOM05D004042 ORTHO05D004552 3.9e-38 163.7 426 30.8
PGSC0003DMG400032789 Solanum tuberosum HOM05D004042 ORTHO05D004552 8.1e-36 156.0 106 74.5
Cfa021676 Carpinus fangiana HOM05D004042 ORTHO05D004552 3.1e-35 154.1 523 28.1
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 3.2e-32 144.1 188 42.6
Lalb_Chr11g0074531 Lupinus albus HOM05D004042 ORTHO05D004552 6.0e-15 86.7 53 69.8
PSO765G0232 Papaver somniferum HOM05D004042 ORTHO05D004552 7.9e-15 86.3 123 45.5
Glyma.15G171700 Glycine max HOM05D004042 ORTHO05D004552 1.8e-14 85.1 49 73.5
Peaxi162Scf00126g01028 Petunia axillaris HOM05D004042 ORTHO05D004552 2.3e-14 84.7 48 83.3
Cfa025900 Carpinus fangiana HOM05D004042 ORTHO05D123407 2.5e-13 81.3 219 27.4
Cfa024924 Carpinus fangiana HOM05D004042 ORTHO05D004552 5.8e-10 70.1 222 24.3
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 1.4e-08 65.5 63 49.2
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 6.7e-06 56.6 165 29.7
Peaxi162Scf00126g01016 Petunia axillaris HOM05D004042 ORTHO05D306396 6.7e-06 56.6 26 88.5


User provided reference genes

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