Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001515g0100 Nicotiana tabacum HOM05D002030 ORTHO05D007413 1.5e-59 232.6 115 100.0
Nitab4.5_0001515g0060 Nicotiana tabacum HOM05D002030 ORTHO05D007413 1.3e-28 129.8 64 92.2
Nitab4.5_0002358g0010 Nicotiana tabacum HOM05D002030 ORTHO05D007413 1.3e-28 129.8 64 92.2
CAN.G993.31 Capsicum annuum HOM05D002030 ORTHO05D007413 6.7e-28 127.5 93 69.9
PGSC0003DMG401026992 Solanum tuberosum HOM05D002030 ORTHO05D007413 5.7e-27 124.4 64 85.9
Solyc06g071630.2 Solanum lycopersicum HOM05D002030 ORTHO05D007413 1.3e-26 123.2 86 70.9
Sopen06g027940 Solanum pennellii HOM05D002030 ORTHO05D007413 1.6e-26 122.9 86 69.8
Peaxi162Scf00177g00919 Petunia axillaris HOM05D002030 ORTHO05D007413 3.7e-26 121.7 77 74.0
GSVIVG01037252001 Vitis vinifera HOM05D002030 ORTHO05D007413 5.9e-24 114.4 62 77.4
Peaxi162Scf00108g00034 Petunia axillaris HOM05D002030 ORTHO05D007413 7.6e-24 114.0 62 80.6
Cpa.g.sc529.1 Carica papaya HOM05D002030 ORTHO05D007413 3.8e-23 111.7 75 68.0
Potri.001G277200 Populus trichocarpa HOM05D002030 ORTHO05D007413 3.8e-23 111.7 75 68.0
TAR628G0894 Trochodendron aralioides HOM05D002030 ORTHO05D007413 5.0e-23 111.3 62 74.2
Sabra16G0171300 Salix brachista HOM05D002030 ORTHO05D007413 6.5e-23 110.9 62 77.4
Actinidia06954 Actinidia chinensis HOM05D002030 ORTHO05D007413 8.4e-23 110.5 62 75.8
arahy.Tifrunner.gnm1.ann1.59T0PU Arachis hypogaea HOM05D002030 ORTHO05D007413 8.4e-23 110.5 75 68.0
arahy.Tifrunner.gnm1.ann1.DSBP33 Arachis hypogaea HOM05D002030 ORTHO05D007413 8.4e-23 110.5 75 68.0
Atru.chr3.2803 Acer truncatum HOM05D002030 ORTHO05D007413 1.9e-22 109.4 62 72.6
Hma1.2p1_0872F.1_g231160 Hydrangea macrophylla HOM05D002030 ORTHO05D007413 4.2e-22 108.2 62 74.2
Lalb_Chr02g0151181 Lupinus albus HOM05D002030 ORTHO05D007413 4.2e-22 108.2 62 72.6
TWI09G0205 Tripterygium wilfordii HOM05D002030 ORTHO05D007413 4.2e-22 108.2 75 62.7
CSS0014605 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 5.5e-22 107.8 62 75.8
CSS0026005 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 5.5e-22 107.8 62 75.8
AUR62039829 Chenopodium quinoa HOM05D002030 ORTHO05D004391 5.5e-22 107.8 62 74.2
ClCG03G012710 Citrullus lanatus HOM05D002030 ORTHO05D007413 5.5e-22 107.8 62 72.6
CsaV3_1G043250 Cucumis sativus L. HOM05D002030 ORTHO05D007413 5.5e-22 107.8 62 72.6
arahy.Tifrunner.gnm1.ann1.G6N61A Arachis hypogaea HOM05D002030 ORTHO05D007413 7.2e-22 107.5 75 66.7
COL.COLO4_33273 Corchorus olitorius HOM05D002030 ORTHO05D007413 7.2e-22 107.5 75 66.7
MELO3C015133.2 Cucumis melo HOM05D002030 ORTHO05D007413 7.2e-22 107.5 62 72.6
THA.LOC104800445 Tarenaya hassleriana HOM05D002030 ORTHO05D007413 7.2e-22 107.5 62 72.6
Eucgr.B03727 Eucalyptus grandis HOM05D002030 ORTHO05D007413 9.3e-22 107.1 62 74.2
QL04p021544 Quercus lobata HOM05D002030 ORTHO05D007413 9.3e-22 107.1 62 71.0
Thecc.09G250300 Theobroma cacao HOM05D002030 ORTHO05D007413 9.3e-22 107.1 61 77.0
Ca_21049_v3 Cicer arietinum L. HOM05D002030 ORTHO05D007413 1.2e-21 106.7 63 74.6
Cc01_g00100 Coffea canephora HOM05D002030 ORTHO05D007413 1.2e-21 106.7 62 72.6
Cc04_g16190 Coffea canephora HOM05D002030 ORTHO05D007413 1.2e-21 106.7 62 72.6
Sed0013906 Sechium edule HOM05D002030 ORTHO05D007413 1.2e-21 106.7 62 72.6
Dinv05065 Davidia involucrata HOM05D002030 ORTHO05D007413 1.6e-21 106.3 75 61.3
PSO384G3354 Papaver somniferum HOM05D002030 ORTHO05D007413 1.6e-21 106.3 62 75.8
Phvul.007G141800 Phaseolus vulgaris HOM05D002030 ORTHO05D007413 1.6e-21 106.3 62 71.0
Psat4g003440 Pisum sativum HOM05D002030 ORTHO05D007413 1.6e-21 106.3 63 74.6
CDE02G3397 Ceratophyllum demersum HOM05D002030 ORTHO05D007413 2.1e-21 105.9 62 69.4
Ciclev10018312m.g Citrus clementina HOM05D002030 ORTHO05D007413 2.1e-21 105.9 62 72.6
Manes.02G141000 Manihot esculenta HOM05D002030 ORTHO05D007413 2.1e-21 105.9 75 62.7
CANSAT25G2826 Cannabis sativa HOM05D002030 ORTHO05D007413 2.7e-21 105.5 62 69.4
Duzib168G1726 Durio zibethinus HOM05D002030 ORTHO05D007413 2.7e-21 105.5 62 74.2
PSO339G1606 Papaver somniferum HOM05D002030 ORTHO05D007413 2.7e-21 105.5 62 74.2
PGR102G2312 Punica granatum HOM05D002030 ORTHO05D007413 2.7e-21 105.5 62 72.6
Prupe.1G578000 Prunus persica HOM05D002030 ORTHO05D007413 3.5e-21 105.1 62 71.0
MD15G1397300 Malus domestica HOM05D002030 ORTHO05D007413 4.6e-21 104.8 62 67.7
RcHm_v2.0_Chr6g0267091 Rosa chinensis HOM05D002030 ORTHO05D007413 4.6e-21 104.8 75 61.3
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 6.1e-21 104.4 62 69.4
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 6.1e-21 104.4 62 69.4
HPP92_008257 Vanilla planifolia HOM05D002030 ORTHO05D007413 6.1e-21 104.4 63 68.3
Ah.04g162000 Amaranthus hybridus HOM05D002030 ORTHO05D007413 1.0e-20 103.6 62 67.7
RcHm_v2.0_Chr2g0127281 Rosa chinensis HOM05D002030 ORTHO05D007413 1.3e-20 103.2 75 60.0
SHI24995 Sapria himalayana HOM05D002030 ORTHO05D007413 1.3e-20 103.2 61 68.9
AUR62000179 Chenopodium quinoa HOM05D002030 ORTHO05D007413 1.8e-20 102.8 62 71.0
FvH4_3g28960 Fragaria vesca HOM05D002030 ORTHO05D007413 1.8e-20 102.8 61 72.1
Glyma.20G191000 Glycine max HOM05D002030 ORTHO05D007413 1.8e-20 102.8 62 71.0
MBI03_g13094_MAGBIO Magnolia biondii HOM05D002030 ORTHO05D007413 1.8e-20 102.8 62 71.0
Haze_02982 Corylus avellana HOM05D002030 ORTHO05D007413 3.0e-20 102.1 62 69.4
Gohir.D05G074500 Gossypium hirsutum HOM05D002030 ORTHO05D007413 3.0e-20 102.1 62 71.0
Lj5g0021026 Lotus japonicus HOM05D002030 ORTHO05D007413 3.0e-20 102.1 62 69.4
Rhsim13G0212600 Rhododendron simsii HOM05D002030 ORTHO05D007413 3.0e-20 102.1 75 61.3
VMungo0720G1521 Vigna mungo HOM05D002030 ORTHO05D007413 3.0e-20 102.1 62 71.0
MD11G1194100 Malus domestica HOM05D002030 ORTHO05D007413 5.1e-20 101.3 62 64.5
HanXRQChr10g0319281 Helianthus annuus HOM05D002030 ORTHO05D007413 6.7e-20 100.9 62 64.5
ECA248G2873 Erigeron canadensis HOM05D002030 ORTHO05D007413 8.7e-20 100.5 62 67.7
Gohir.A05G071600 Gossypium hirsutum HOM05D002030 ORTHO05D007413 8.7e-20 100.5 62 69.4
Nn7g36615 Nelumbo nucifera HOM05D002030 ORTHO05D007413 8.7e-20 100.5 62 67.7
SEGI_26527 Sequoiadendron giganteum HOM05D002030 ORTHO05D007413 8.7e-20 100.5 62 69.4
MSTRG.19666 Avicennia marina HOM05D002030 ORTHO05D007413 1.1e-19 100.1 75 62.7
Cfa010958 Carpinus fangiana HOM05D002030 ORTHO05D007413 1.1e-19 100.1 62 69.4
Cfa019819 Carpinus fangiana HOM05D002030 ORTHO05D007413 1.1e-19 100.1 62 69.4
Lj4P151T58 Lonicera japonica HOM05D002030 ORTHO05D007413 1.1e-19 100.1 62 67.7
Mapoly0033s0111 Marchantia polymorpha HOM05D002030 ORTHO05D007413 1.1e-19 100.1 62 64.5
TPR.G37056 Trifolium pratense HOM05D002030 ORTHO05D007413 1.1e-19 100.1 63 73.0
AagrBONN_evm.TU.Sc2ySwM_368.2374 Anthoceros agrestis HOM05D002030 ORTHO05D007413 1.5e-19 99.8 63 65.1
Sc19g0005890 Simmondsia chinensis HOM05D002030 ORTHO05D007413 1.5e-19 99.8 62 64.5
Gorai.009G075600 Gossypium raimondii HOM05D002030 ORTHO05D007413 1.9e-19 99.4 62 69.4
Aqoxy1G00344 Aquilegia oxysepala HOM05D002030 ORTHO05D007413 2.5e-19 99.0 62 64.5
BcaC01g05781 Brassica carinata HOM05D002030 ORTHO05D007413 2.5e-19 99.0 65 63.1
C03p22450 Brassica napus HOM05D002030 ORTHO05D007413 2.5e-19 99.0 65 63.1
BolC3t14628H Brassica oleracea HOM05D002030 ORTHO05D007413 2.5e-19 99.0 65 63.1
CiPaw.06G055000 Carya illinoinensis HOM05D002030 ORTHO05D007413 2.5e-19 99.0 71 59.2
Oeu024896.1 Olea europaea HOM05D002030 ORTHO05D007413 4.3e-19 98.2 62 66.1
SGA_v2.0_scaffold45G17005 Striga asiatica HOM05D002030 ORTHO05D007413 4.3e-19 98.2 63 68.3
Medtr4g132910 Medicago truncatula HOM05D002030 ORTHO05D007413 5.7e-19 97.8 63 73.0
SMO141G0167 Selaginella moellendorffii HOM05D002030 ORTHO05D007413 5.7e-19 97.8 61 67.2
Migut.J01395 Erythranthe guttata HOM05D002030 ORTHO05D007413 9.7e-19 97.1 60 70.0
Aa31LG9G2740 Aethionema arabicum HOM05D002030 ORTHO05D007413 1.3e-18 96.7 64 57.8
Carub.0007s2761 Capsella rubella HOM05D002030 ORTHO05D007413 1.6e-18 96.3 65 63.1
Os11g0171400 Oryza sativa ssp. japonica HOM05D002030 ORTHO05D007413 1.6e-18 96.3 62 64.5
Pp3c16_4000 Physcomitrium patens HOM05D002030 ORTHO05D007413 1.6e-18 96.3 64 64.1
ATR0693G336 Amborella trichopoda HOM05D002030 ORTHO05D007413 2.2e-18 95.9 62 62.9
AL7G41540 Arabidopsis lyrata HOM05D002030 ORTHO05D007413 4.8e-18 94.7 65 61.5
Zm00001eb091720 Zea mays HOM05D002030 ORTHO05D007413 4.8e-18 94.7 62 62.9
A03p19250 Brassica napus HOM05D002030 ORTHO05D007413 1.1e-17 93.6 65 60.0
BraA03t11180Z Brassica rapa HOM05D002030 ORTHO05D007413 1.1e-17 93.6 65 60.0
AT4G14590 Arabidopsis thaliana HOM05D002030 ORTHO05D007413 1.8e-17 92.8 65 60.0
CARHR220820 Cardamine hirsuta HOM05D002030 ORTHO05D007413 2.4e-17 92.4 65 60.0
Thhalv10027440m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 5.3e-17 91.3 64 62.5
unitig_0.g561 Utricularia gibba HOM05D002030 ORTHO05D007413 5.3e-17 91.3 62 64.5
Sp7g12690 Schrenkiella parvula HOM05D002030 ORTHO05D007413 1.5e-16 89.7 65 58.5
Lsat_1_v5_gn_5_164660 Lactuca sativa HOM05D002030 ORTHO05D007413 3.4e-16 88.6 62 58.1
CBR_g18996 Chara braunii HOM05D002030 ORTHO05D007413 4.5e-16 88.2 55 65.5
Rhsim13G0218500 Rhododendron simsii HOM05D002030 ORTHO05D007413 7.7e-16 87.4 66 57.6
Thhalv10017599m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 1.9e-14 82.8 65 55.4
BcaC08g44279 Brassica carinata HOM05D002030 ORTHO05D007413 5.5e-14 81.3 65 56.9
C06p16980 Brassica napus HOM05D002030 ORTHO05D007413 5.5e-14 81.3 65 56.9
BolC6t36898H Brassica oleracea HOM05D002030 ORTHO05D007413 1.4e-12 76.6 62 54.8
MD00G1154100 Malus domestica HOM05D002030 ORTHO05D007413 6.7e-12 74.3 46 65.2
Solyc12g010650.1 Solanum lycopersicum HOM05D000161 ORTHO05D000111 8.2e-10 67.4 42 66.7


User provided reference genes

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