Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 3.0e-128 461.8 228 100.0
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 4.2e-114 414.8 229 90.0
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 3.1e-109 398.7 229 85.2
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 7.6e-108 394.0 229 85.2
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 2.2e-107 392.5 235 81.3
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 2.1e-105 386.0 235 80.0
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 1.9e-82 309.7 236 62.3
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 9.3e-82 307.4 236 61.9
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 1.0e-80 303.9 238 58.4
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 5.1e-80 301.6 237 59.1
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 8.7e-80 300.8 238 60.5
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 1.6e-78 296.6 229 62.0
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 3.7e-78 295.4 238 59.2
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 3.7e-78 295.4 232 63.4
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 4.8e-78 295.0 240 60.4
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 6.3e-78 294.7 238 60.5
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 8.2e-78 294.3 238 59.2
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 3.1e-77 292.4 228 58.8
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 4.1e-77 292.0 232 60.8
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 5.3e-77 291.6 238 58.4
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 9.0e-77 290.8 230 59.1
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 1.0e-75 287.3 230 58.7
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.3e-75 287.0 228 57.9
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 1.7e-75 286.6 240 54.6
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.8e-75 285.4 228 57.9
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 5.0e-75 285.0 238 57.6
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 1.4e-74 283.5 228 58.8
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 4.2e-74 282.0 228 59.6
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 5.5e-74 281.6 228 57.5
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.6e-73 278.9 224 57.6
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 6.1e-73 278.1 233 59.2
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 6.1e-73 278.1 241 56.4
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 7.9e-73 277.7 234 56.0
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 1.8e-72 276.6 235 57.9
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 3.0e-72 275.8 230 60.0
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 3.9e-72 275.4 238 55.0
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 1.1e-71 273.9 238 55.9
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 2.5e-71 272.7 239 56.1
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 2.5e-71 272.7 233 55.4
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 3.3e-71 272.3 232 57.3
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 5.7e-71 271.6 238 57.1
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 5.7e-71 271.6 227 60.4
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 1.3e-70 270.4 239 54.8
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 1.7e-70 270.0 238 54.2
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 2.2e-70 269.6 234 56.8
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 3.7e-70 268.9 234 56.0
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 3.7e-70 268.9 228 56.1
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 3.7e-70 268.9 237 55.3
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 4.8e-70 268.5 228 56.1
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 4.8e-70 268.5 228 55.7
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 4.8e-70 268.5 239 56.5
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 8.2e-70 267.7 229 55.9
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 1.1e-69 267.3 235 56.2
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 1.1e-69 267.3 228 55.7
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 1.1e-69 267.3 228 55.7
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 1.4e-69 266.9 231 55.8
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 2.4e-69 266.2 228 56.1
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 2.4e-69 266.2 228 56.1
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 2.4e-69 266.2 228 56.1
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 4.1e-69 265.4 234 56.8
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 4.1e-69 265.4 234 53.0
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 4.1e-69 265.4 228 53.5
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 9.1e-69 264.2 233 55.8
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 1.2e-68 263.8 233 53.6
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 4.5e-68 261.9 188 66.5
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 4.5e-68 261.9 234 56.0
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 1.3e-67 260.4 235 51.1
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 1.7e-67 260.0 237 51.9
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 1.7e-67 260.0 238 51.3
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 2.7e-65 252.7 226 56.2
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 7.9e-65 251.1 194 62.4
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 1.0e-64 250.8 228 56.6
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 3.9e-64 248.8 224 55.8
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 8.8e-64 247.7 188 63.3
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.1e-63 247.3 197 57.4
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 1.1e-63 247.3 229 55.9
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 2.2e-62 243.0 233 51.1
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 6.3e-62 241.5 179 65.9
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 7.0e-61 238.0 198 58.6
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 3.5e-60 235.7 207 56.5
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 1.1e-58 230.7 236 49.6
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 2.3e-56 223.0 240 47.5
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 2.0e-55 219.9 183 53.6
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.7e-54 216.9 169 59.2
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 2.8e-54 216.1 169 58.6
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 7.7e-52 208.0 223 50.2
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 2.2e-51 206.5 170 58.8
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 1.5e-50 203.8 145 67.6
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 2.0e-44 183.3 203 47.8
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 2.1e-41 173.3 337 32.0
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 3.6e-41 172.6 172 52.3
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 2.5e-34 149.8 129 58.1
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 5.5e-34 148.7 186 41.4
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 6.1e-33 145.2 71 97.2
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.0e-32 144.4 230 34.3
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 7.5e-31 138.3 228 38.6
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 2.2e-30 136.7 274 31.4
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 2.0e-28 130.2 117 53.0
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 1.3e-27 127.5 226 36.3
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 5.6e-26 122.1 198 39.9
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 2.8e-25 119.8 180 37.2
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 8.0e-25 118.2 271 29.9
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 2.0e-20 103.6 89 48.3
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 6.2e-17 92.0 96 45.8
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 2.2e-14 83.6 121 38.0
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 8.3e-14 81.6 64 64.1
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 4.6e-12 75.9 131 33.6
VMungo0331G1316 Vigna mungo HOM05D006594 ORTHO05D008383 8.4e-06 55.1 91 35.2


User provided reference genes

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