Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001504g0060 Nicotiana tabacum HOM05D000007 ORTHO05D007252 8.1e-122 440.3 199 100.0
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 9.6e-91 337.0 192 80.7
Nitab4.5_0000157g0100 Nicotiana tabacum HOM05D000007 ORTHO05D007252 4.5e-80 301.6 191 71.7
PGSC0003DMG400008507 Solanum tuberosum HOM05D000007 ORTHO05D007252 1.2e-64 250.4 192 61.5
Nitab4.5_0000157g0110 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.9e-55 219.2 175 64.6
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 1.1e-54 217.2 136 77.2
Nitab4.5_0003898g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 3.2e-54 215.7 166 63.3
Nitab4.5_0007469g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 9.4e-54 214.2 192 56.2
Actinidia38511 Actinidia chinensis HOM05D000007 ORTHO05D007252 2.3e-44 183.0 193 45.6
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 7.5e-43 177.9 197 46.2
Rhsim03G0268000 Rhododendron simsii HOM05D000007 ORTHO05D007252 9.7e-43 177.6 197 45.7
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 8.2e-42 174.5 193 46.1
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 3.5e-40 169.1 192 44.3
Migut.J00822 Erythranthe guttata HOM05D000007 ORTHO05D007252 4.5e-40 168.7 193 46.6
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 1.1e-38 164.1 194 43.3
Nitab4.5_0007469g0030 Nicotiana tabacum HOM05D000007 ORTHO05D007252 9.4e-38 161.0 189 48.1
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 4.0e-36 155.6 193 42.0
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 1.6e-21 107.1 193 31.1
Ciclev10033438m.g Citrus clementina HOM05D000007 ORTHO05D007252 1.0e-20 104.4 196 31.1
Nitab4.5_0000053g0200 Nicotiana tabacum HOM05D000007 ORTHO05D007252 3.4e-19 99.4 124 44.4
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 8.3e-18 94.7 182 35.7
PGSC0003DMG400021626 Solanum tuberosum HOM05D009844 ORTHO05D007252 1.1e-17 94.4 201 31.3
Oeu028485.1 Olea europaea HOM05D000007 ORTHO05D007252 7.0e-17 91.7 87 52.9
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 5.9e-16 88.6 170 34.1
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 5.9e-16 88.6 170 34.1
Dinv21217 Davidia involucrata HOM05D000007 ORTHO05D007252 1.3e-15 87.4 185 33.0
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.1e-14 84.3 205 30.7
Peaxi162Scf00618g10023 Petunia axillaris HOM05D009844 ORTHO05D007252 5.6e-14 82.0 183 30.1
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 7.3e-14 81.6 204 30.4
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.6e-13 80.5 122 36.1
Sopen09g036270 Solanum pennellii HOM05D009844 ORTHO05D007252 8.0e-13 78.2 194 30.4
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.1e-12 77.8 198 28.3
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.8e-12 77.0 196 32.1
Oeu051380.1 Olea europaea HOM05D000007 ORTHO05D007252 8.9e-12 74.7 186 28.5
Oeu039143.1 Olea europaea HOM05D000007 ORTHO05D007252 4.4e-11 72.4 124 32.3
Sopen09g035440 Solanum pennellii HOM05D009844 ORTHO05D007252 4.4e-11 72.4 133 31.6
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 7.5e-11 71.6 196 30.1
Solyc09g092540.1 Solanum lycopersicum HOM05D009844 ORTHO05D007252 9.8e-11 71.2 128 32.8
Oeu002086.1 Olea europaea HOM05D000007 ORTHO05D007252 1.7e-10 70.5 124 31.5
Oeu056889.1 Olea europaea HOM05D000007 ORTHO05D007252 2.2e-10 70.1 172 27.3
Ah.10g035830 Amaranthus hybridus HOM05D031416 ORTHO05D007252 2.9e-10 69.7 183 27.9
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.9e-10 68.9 171 32.2
Sc16g0011260 Simmondsia chinensis HOM05D038559 ORTHO05D007252 6.4e-10 68.6 169 29.6
COL.COLO4_04270 Corchorus olitorius HOM05D000007 ORTHO05D007252 1.1e-09 67.8 161 31.7
Dinv36193 Davidia involucrata HOM05D003981 ORTHO05D003666 2.4e-09 66.6 111 34.2
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 2.4e-09 66.6 201 26.4
Solyc09g098350.4 Solanum lycopersicum HOM05D009844 ORTHO05D007252 3.2e-09 66.2 132 31.8
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.2e-09 66.2 117 35.9
TAR371G0432 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.4e-09 65.5 216 28.2
TAR371G1225 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.4e-09 65.5 101 36.6
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.6e-08 63.9 125 34.4
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.7e-08 63.2 208 27.4
DCAR_004306 Daucus carota HOM05D000007 ORTHO05D000017 3.5e-08 62.8 165 28.5
Migut.J01047 Erythranthe guttata HOM05D000007 ORTHO05D007252 3.5e-08 62.8 177 27.1
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.5e-08 62.8 125 33.6
MBI19_g26733_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 4.6e-08 62.4 202 28.7
Sc16g0011270 Simmondsia chinensis HOM05D038559 ORTHO05D007252 4.6e-08 62.4 133 30.8
TAR371G1227 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.6e-08 62.4 142 28.9
QL08p033970 Quercus lobata HOM05D000007 ORTHO05D003666 7.8e-08 61.6 109 31.2
COL.COLO4_10484 Corchorus olitorius HOM05D013022 ORTHO05D007252 1.3e-07 60.8 120 33.3
COL.COLO4_36676 Corchorus olitorius HOM05D000007 ORTHO05D007252 1.3e-07 60.8 160 29.4
PSO339G2376 Papaver somniferum HOM05D000007 ORTHO05D000017 1.3e-07 60.8 161 27.3
TAR371G0362 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.3e-07 60.1 140 28.6
Nitab4.5_0000762g0110 Nicotiana tabacum HOM05D013374 ORTHO05D013933 3.0e-07 59.7 128 32.0
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 3.0e-07 59.7 105 34.3
TAR375G0750 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.0e-07 59.7 159 30.2
Dinv43422 Davidia involucrata HOM05D000007 ORTHO05D007252 5.0e-07 58.9 136 31.6
SGA_v2.0_scaffold13G06731 Striga asiatica HOM05D000007 ORTHO05D007252 5.0e-07 58.9 178 25.8
AL7G31190 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 8.6e-07 58.2 171 26.3
TAR624G0631 Trochodendron aralioides HOM05D000007 ORTHO05D003666 8.6e-07 58.2 117 33.3
Lj4A649T29 Lonicera japonica HOM05D013022 ORTHO05D007252 1.9e-06 57.0 154 26.6
AL1G62500 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-06 56.6 133 27.1
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.5e-06 56.6 136 32.4
CAN.G229.18 Capsicum annuum HOM05D000007 ORTHO05D000017 3.3e-06 56.2 166 27.1
Lj4A650T22 Lonicera japonica HOM05D013022 ORTHO05D007252 3.3e-06 56.2 154 26.6
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.3e-06 56.2 130 31.5
CAN.G64.26 Capsicum annuum HOM05D000007 ORTHO05D000017 4.3e-06 55.8 164 28.7
Gohir.D08G025866 Gossypium hirsutum HOM05D000007 ORTHO05D000017 4.3e-06 55.8 111 31.5
Gorai.004G021900 Gossypium raimondii HOM05D000007 ORTHO05D000017 4.3e-06 55.8 111 31.5
Lj4A648G14 Lonicera japonica HOM05D013022 ORTHO05D007252 4.3e-06 55.8 154 26.6
TWI34G0359 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 4.3e-06 55.8 173 27.2
HanXRQChr13g0397281 Helianthus annuus HOM05D000007 ORTHO05D000039 5.6e-06 55.5 129 31.0
Lj4C650T12 Lonicera japonica HOM05D013022 ORTHO05D007252 5.6e-06 55.5 112 31.2
Aqoxy5G00679 Aquilegia oxysepala HOM05D000171 ORTHO05D000101 7.3e-06 55.1 161 26.1


User provided reference genes

Program Settings