Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001501g0030 Nicotiana tabacum HOM05D006988 ORTHO05D008731 8.4e-111 403.7 201 100.0
Nitab4.5_0000882g0050 Nicotiana tabacum HOM05D006988 ORTHO05D008731 1.8e-100 369.4 210 91.0
Peaxi162Scf00350g00014 Petunia axillaris HOM05D006988 ORTHO05D008731 2.0e-88 329.3 208 81.7
Solyc10g018590.2 Solanum lycopersicum HOM05D006988 ORTHO05D008731 1.4e-84 316.6 204 83.3
Sopen10g008330 Solanum pennellii HOM05D006988 ORTHO05D008731 1.1e-83 313.5 203 81.8
PGSC0003DMG400011763 Solanum tuberosum HOM05D006988 ORTHO05D008731 1.1e-83 313.5 204 81.9
CAN.G160.69 Capsicum annuum HOM05D006988 ORTHO05D008731 2.4e-81 305.8 206 78.6
MELO3C021141.2 Cucumis melo HOM05D006988 ORTHO05D008731 2.6e-75 285.8 209 72.2
Migut.B01575 Erythranthe guttata HOM05D006988 ORTHO05D008731 3.3e-75 285.4 203 73.4
Haze_02728 Corylus avellana HOM05D006988 ORTHO05D008731 4.4e-75 285.0 201 71.6
Gohir.D07G153600 Gossypium hirsutum HOM05D006988 ORTHO05D008731 4.4e-75 285.0 184 79.3
Gorai.001G175700 Gossypium raimondii HOM05D006988 ORTHO05D008731 7.5e-75 284.3 184 78.8
CsaV3_6G009120 Cucumis sativus L. HOM05D006988 ORTHO05D008731 1.3e-74 283.5 206 72.8
CSS0011747 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 2.8e-74 282.3 211 71.6
Potri.014G058400 Populus trichocarpa HOM05D006988 ORTHO05D008731 2.8e-74 282.3 205 73.7
CSS0001978 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 8.2e-74 280.8 211 71.6
Sabra14G0042600 Salix brachista HOM05D006988 ORTHO05D008731 8.2e-74 280.8 203 73.9
COL.COLO4_12466 Corchorus olitorius HOM05D006988 ORTHO05D008731 1.4e-73 280.0 176 80.1
FvH4_7g10720 Fragaria vesca HOM05D006988 ORTHO05D008731 2.4e-73 279.3 201 70.6
Prupe.2G135300 Prunus persica HOM05D006988 ORTHO05D008731 3.1e-73 278.9 201 72.1
SalBow5G4855 Salvia bowleyana HOM05D006988 ORTHO05D008731 3.1e-73 278.9 203 73.9
ClCG06G003000 Citrullus lanatus HOM05D006988 ORTHO05D008731 4.1e-73 278.5 177 79.1
Duzib133G0505 Durio zibethinus HOM05D006988 ORTHO05D008731 4.1e-73 278.5 190 74.7
FAN06G3033 Fragaria x ananassa HOM05D006988 ORTHO05D008731 1.6e-72 276.6 209 70.3
Gohir.A07G147500 Gossypium hirsutum HOM05D006988 ORTHO05D008731 2.0e-72 276.2 203 72.4
Manes.01G270400 Manihot esculenta HOM05D006988 ORTHO05D008731 2.0e-72 276.2 206 70.9
FAN06G2548 Fragaria x ananassa HOM05D006988 ORTHO05D008731 2.7e-72 275.8 203 70.0
HanXRQChr06g0168881 Helianthus annuus HOM05D006988 ORTHO05D008731 2.7e-72 275.8 209 70.3
Dinv43657 Davidia involucrata HOM05D006988 ORTHO05D008731 3.5e-72 275.4 214 67.8
VMungo1383G3408 Vigna mungo HOM05D006988 ORTHO05D008731 4.5e-72 275.0 174 77.6
Lsat_1_v5_gn_7_10320 Lactuca sativa HOM05D006988 ORTHO05D008731 5.9e-72 274.6 204 72.1
Sed0016586 Sechium edule HOM05D006988 ORTHO05D008731 1.3e-71 273.5 196 73.0
Thecc.01G386200 Theobroma cacao HOM05D006988 ORTHO05D008731 2.2e-71 272.7 177 78.0
Ca_27093_v3 Cicer arietinum L. HOM05D006988 ORTHO05D008731 6.5e-71 271.2 203 70.4
Lj9A563T51 Lonicera japonica HOM05D006988 ORTHO05D008731 1.1e-70 270.4 206 68.9
Lj1g0025695 Lotus japonicus HOM05D006988 ORTHO05D008731 1.1e-70 270.4 203 69.0
MBI04_g09512_MAGBIO Magnolia biondii HOM05D006988 ORTHO05D008731 1.1e-70 270.4 171 80.1
Phvul.008G157000 Phaseolus vulgaris HOM05D006988 ORTHO05D008731 1.1e-70 270.4 195 70.8
Cc02_g24580 Coffea canephora HOM05D006988 ORTHO05D008731 2.5e-70 269.2 175 78.9
Nn6g33931 Nelumbo nucifera HOM05D006988 ORTHO05D008731 4.2e-70 268.5 215 66.0
FAN03G1007 Fragaria x ananassa HOM05D006988 ORTHO05D008731 5.5e-70 268.1 204 67.6
MD07G1111900 Malus domestica HOM05D006988 ORTHO05D008731 7.2e-70 267.7 201 70.1
QL04p035766 Quercus lobata HOM05D006988 ORTHO05D008731 7.2e-70 267.7 208 67.8
Hma1.2p1_0341F.1_g130300 Hydrangea macrophylla HOM05D006988 ORTHO05D008731 9.4e-70 267.3 187 72.7
CiPaw.13G030900 Carya illinoinensis HOM05D006988 ORTHO05D008731 3.6e-69 265.4 206 67.5
Atru.chr5.214 Acer truncatum HOM05D006988 ORTHO05D008731 4.7e-69 265.0 184 73.4
EL10Ac1g00818 Beta vulgaris HOM05D006988 ORTHO05D008731 1.0e-68 263.8 216 63.9
Hund17063 Selenicereus undatus HOM05D006988 ORTHO05D008731 1.8e-68 263.1 199 68.8
arahy.Tifrunner.gnm1.ann1.EWF75K Arachis hypogaea HOM05D006988 ORTHO05D008731 2.3e-68 262.7 194 67.5
arahy.Tifrunner.gnm1.ann1.I2GGUW Arachis hypogaea HOM05D006988 ORTHO05D008731 2.3e-68 262.7 194 67.5
Rhsim07G0032500 Rhododendron simsii HOM05D006988 ORTHO05D008731 2.3e-68 262.7 176 75.6
TAR636G1375 Trochodendron aralioides HOM05D006988 ORTHO05D008731 2.3e-68 262.7 176 72.7
AUR62004148 Chenopodium quinoa HOM05D006988 ORTHO05D008731 5.2e-68 261.5 216 63.9
AUR62013709 Chenopodium quinoa HOM05D006988 ORTHO05D008731 6.8e-68 261.2 214 64.5
Glyma.11G164037 Glycine max HOM05D006988 ORTHO05D008731 1.2e-67 260.4 195 68.7
Glyma.01G076100 Glycine max HOM05D006988 ORTHO05D008731 2.0e-67 259.6 174 73.0
Sp6g00080 Schrenkiella parvula HOM05D006988 ORTHO05D008731 1.3e-66 256.9 183 71.0
THA.LOC104814078 Tarenaya hassleriana HOM05D006988 ORTHO05D008731 1.3e-66 256.9 177 72.3
CANSAT01G0747 Cannabis sativa HOM05D006988 ORTHO05D008731 3.7e-66 255.4 185 71.9
ECA236G3211 Erigeron canadensis HOM05D006988 ORTHO05D008731 3.7e-66 255.4 177 74.0
Medtr7g444820 Medicago truncatula HOM05D006988 ORTHO05D008731 3.7e-66 255.4 192 68.8
Aqoxy7G00790 Aquilegia oxysepala HOM05D006988 ORTHO05D008731 3.1e-65 252.3 211 63.0
SGA_v2.0_scaffold153G36954 Striga asiatica HOM05D006988 ORTHO05D008731 4.1e-65 251.9 211 65.4
DCAR_031865 Daucus carota HOM05D006988 ORTHO05D008731 9.1e-65 250.8 194 68.6
AT4G00030 Arabidopsis thaliana HOM05D006988 ORTHO05D008731 2.7e-64 249.2 178 68.5
CARHR248070 Cardamine hirsuta HOM05D006988 ORTHO05D008731 6.6e-63 244.6 180 67.2
SEGI_39512 Sequoiadendron giganteum HOM05D006988 ORTHO05D008731 6.6e-63 244.6 170 70.0
BcaB01g02207 Brassica carinata HOM05D006988 ORTHO05D008731 1.1e-62 243.8 178 69.1
C09p00070 Brassica napus HOM05D006988 ORTHO05D008731 1.5e-62 243.4 180 68.3
BraA09t35681Z Brassica rapa HOM05D006988 ORTHO05D008731 1.5e-62 243.4 180 68.3
COL.COLO4_37993 Corchorus olitorius HOM05D006988 ORTHO05D008731 1.5e-62 243.4 191 67.5
PSO170G6265 Papaver somniferum HOM05D006988 ORTHO05D008731 2.5e-62 242.7 169 69.2
RcHm_v2.0_Chr1g0348671 Rosa chinensis HOM05D006988 ORTHO05D008731 3.3e-62 242.3 184 70.1
BcaC04g24207 Brassica carinata HOM05D006988 ORTHO05D008731 5.5e-62 241.5 180 67.8
BolC9t52942H Brassica oleracea HOM05D006988 ORTHO05D008731 5.5e-62 241.5 180 67.8
Carub.0006s3719 Capsella rubella HOM05D006988 ORTHO05D008731 9.5e-62 240.7 179 65.9
ATR0317G076 Amborella trichopoda HOM05D006988 ORTHO05D008731 2.8e-61 239.2 194 64.4
MSTRG.20719 Avicennia marina HOM05D006988 ORTHO05D008731 1.8e-60 236.5 185 71.9
AL6G53480 Arabidopsis lyrata HOM05D006988 ORTHO05D008731 4.0e-60 235.3 178 65.2
FAN01G2452 Fragaria x ananassa HOM05D006988 ORTHO05D008731 7.5e-59 231.1 179 67.6
Aa31LG5G100 Aethionema arabicum HOM05D006988 ORTHO05D008731 1.7e-58 229.9 219 57.5
Eucgr.D02502 Eucalyptus grandis HOM05D006988 ORTHO05D008731 1.1e-57 227.3 173 69.9
Zm00001eb257570 Zea mays HOM05D006988 ORTHO05D008731 2.7e-56 222.6 165 67.3
Ah.16g110010 Amaranthus hybridus HOM05D006988 ORTHO05D008731 5.9e-56 221.5 152 72.4
Os04g0551700 Oryza sativa ssp. japonica HOM05D006988 ORTHO05D008731 1.0e-55 220.7 165 66.1
GSVIVG01018209001 Vitis vinifera HOM05D006988 ORTHO05D008731 3.8e-55 218.8 130 80.8
TWI59G0585 Tripterygium wilfordii HOM05D006988 ORTHO05D008731 8.6e-55 217.6 206 61.2
TPR.G39083 Trifolium pratense HOM05D006988 ORTHO05D008731 1.1e-54 217.2 133 81.2
Pp3c14_7270 Physcomitrium patens HOM05D006988 ORTHO05D008731 2.5e-54 216.1 187 56.1
Cpa.g.sc620.2 Carica papaya HOM05D006988 ORTHO05D008731 2.8e-53 212.6 189 61.9
Ciclev10022767m.g Citrus clementina HOM05D006988 ORTHO05D008731 3.6e-53 212.2 130 80.0
Mapoly0004s0296 Marchantia polymorpha HOM05D006988 ORTHO05D008731 1.0e-52 210.7 163 62.6
SMO367G0814 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 3.7e-50 202.2 165 58.8
SMO367G0459 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 1.9e-49 199.9 165 58.2
vmacro13459 Vaccinium macrocarpon HOM05D006988 ORTHO05D008731 1.1e-46 190.7 167 64.7
Sc23g0003890 Simmondsia chinensis HOM05D006988 ORTHO05D008731 1.6e-45 186.8 153 60.8
Psat3g157120 Pisum sativum HOM05D006988 ORTHO05D008731 4.7e-45 185.3 146 68.5
Thhalv10028565m.g Eutrema salsugineum HOM05D000447 ORTHO05D000315 3.0e-39 166.0 131 67.2
SMO367G0117 Selaginella moellendorffii HOM05D012767 ORTHO05D008731 1.1e-38 164.1 164 51.8
AagrBONN_evm.TU.Sc2ySwM_362.1347 Anthoceros agrestis HOM05D006988 ORTHO05D008731 5.2e-36 155.2 121 64.5
C02p10970 Brassica napus HOM05D006988 ORTHO05D008731 6.4e-34 148.3 91 72.5
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 1.1e-33 147.5 202 43.6
BolC2t07167H Brassica oleracea HOM05D006988 ORTHO05D008731 2.4e-33 146.4 84 76.2
BcaC03g13893 Brassica carinata HOM05D006988 ORTHO05D008731 3.9e-31 139.0 195 43.1
C03p91270 Brassica napus HOM05D006988 ORTHO05D008731 7.3e-30 134.8 112 62.5
PRCOL_00005443 Prasinoderma coloniale HOM05D006988 ORTHO05D008731 8.1e-29 131.3 230 37.0
unitig_26.g9723 Utricularia gibba HOM05D000502 ORTHO05D000356 6.6e-23 111.7 82 72.0
MCO12G266 Micromonas commoda HOM05D006988 ORTHO05D008731 1.1e-22 110.9 174 40.2
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 1.2e-21 107.5 88 67.0
BcaC01g03084 Brassica carinata HOM05D006988 ORTHO05D008731 2.2e-18 96.7 157 38.2
Lalb_Chr19g0127481 Lupinus albus HOM05D006988 ORTHO05D008731 6.0e-16 88.6 43 88.4
A09p00790 Brassica napus HOM05D006988 ORTHO05D008731 7.8e-16 88.2 84 57.1
Dinv13821 Davidia involucrata HOM05D006988 ORTHO05D008731 3.6e-13 79.3 63 65.1
BolC3t17906H Brassica oleracea HOM05D001199 ORTHO05D001013 4.0e-12 75.9 76 53.9
Actinidia12175 Actinidia chinensis HOM05D006988 ORTHO05D008731 4.5e-11 72.4 69 52.2
C03p56160 Brassica napus HOM05D001199 ORTHO05D001013 1.3e-10 70.9 78 52.6
Lalb_Chr19g0127491 Lupinus albus HOM05D006988 ORTHO05D008731 6.0e-08 62.0 54 57.4
PRCOL_00002581 Prasinoderma coloniale HOM05D005663 ORTHO05D002254 4.3e-06 55.8 179 29.1
Haze_25195 Corylus avellana HOM05D005663 ORTHO05D007258 5.6e-06 55.5 219 26.9
SEGI_39378 Sequoiadendron giganteum HOM05D005663 ORTHO05D007258 9.6e-06 54.7 143 28.7


User provided reference genes

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