Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 9.4e-255 883.6 678 100.0
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 2.9e-86 323.9 478 82.6
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 2.5e-45 188.0 176 55.1
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 3.2e-45 187.6 175 55.4
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 5.5e-45 186.8 176 54.5
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 1.0e-43 182.6 176 54.0
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 7.4e-42 176.4 175 52.0
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 4.1e-32 144.1 177 41.8
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 2.6e-31 141.4 146 47.3
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 7.7e-31 139.8 164 45.1
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 3.8e-30 137.5 143 47.6
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 1.9e-29 135.2 148 45.9
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 1.0e-27 129.4 141 44.0
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 1.4e-27 129.0 142 40.8
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 6.7e-27 126.7 142 43.0
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 1.1e-26 125.9 142 41.5
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 2.0e-26 125.2 190 40.5
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 4.4e-26 124.0 152 44.7
HanXRQChr14g0447481 Helianthus annuus HOM05D006694 ORTHO05D008240 9.7e-26 122.9 129 45.0
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.2e-25 121.7 182 34.6
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 4.8e-25 120.6 144 40.3
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 4.8e-25 120.6 144 40.3
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 6.3e-25 120.2 144 39.6
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.8e-24 118.6 148 40.5
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 3.1e-24 117.9 142 42.3
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 4.1e-24 117.5 148 40.5
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 9.1e-24 116.3 133 44.4
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.5e-23 115.5 148 39.9
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 5.9e-23 113.6 162 35.8
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 5.9e-23 113.6 128 43.8
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 1.3e-22 112.5 143 42.7
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.9e-22 111.3 144 37.5
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 3.8e-22 110.9 154 40.9
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 1.1e-21 109.4 144 37.5
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.9e-21 108.6 144 37.5
Nitab4.5_0000718g0300 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.9e-21 108.6 87 64.4
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 2.5e-21 108.2 144 37.5
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 3.2e-21 107.8 125 44.0
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 4.2e-21 107.5 146 39.0
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 5.5e-21 107.1 146 38.4
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 9.4e-21 106.3 147 37.4
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 9.4e-21 106.3 143 39.2
MSTRG.18464 Avicennia marina HOM05D006694 ORTHO05D008240 1.2e-20 105.9 155 36.8
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 1.2e-20 105.9 143 40.6
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 2.7e-20 104.8 159 35.8
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 1.4e-19 102.4 138 42.0
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 3.0e-19 101.3 146 37.7
Ah.06g194610 Amaranthus hybridus HOM05D006694 ORTHO05D008240 1.3e-17 95.9 111 45.0
EL10Ac4g10114 Beta vulgaris HOM05D006694 ORTHO05D008240 4.5e-15 87.4 93 47.3
VMungo1383G3557 Vigna mungo HOM05D006694 ORTHO05D008240 5.9e-15 87.0 112 38.4
AL7G24620 Arabidopsis lyrata HOM05D006694 ORTHO05D008240 7.7e-15 86.7 117 41.0
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 7.7e-15 86.7 111 40.5
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 1.0e-14 86.3 171 32.7
CARHR235710 Cardamine hirsuta HOM05D006694 ORTHO05D008240 1.3e-14 85.9 134 37.3
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 1.7e-14 85.5 112 42.0
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 5.0e-14 84.0 151 33.8
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 1.1e-13 82.8 147 35.4
Sp1g10540 Schrenkiella parvula HOM05D006694 ORTHO05D008240 1.5e-13 82.4 140 37.1
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.2e-13 80.9 191 32.5
ATR0737G153 Amborella trichopoda HOM05D006694 ORTHO05D008240 5.5e-13 80.5 135 31.9
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 5.5e-13 80.5 112 40.2
Aa31LG5G9000 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.2e-13 80.1 134 38.1
BolC5t29875H Brassica oleracea HOM05D006694 ORTHO05D008240 1.2e-12 79.3 132 34.1
ECA238G0309 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.2e-12 79.3 82 50.0
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.6e-12 79.0 139 36.7
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.6e-12 79.0 139 36.7
C05p11260 Brassica napus HOM05D006694 ORTHO05D008240 1.6e-12 79.0 132 34.1
Phvul.008G105900 Phaseolus vulgaris HOM05D006694 ORTHO05D008240 1.6e-12 79.0 128 35.9
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 2.7e-12 78.2 82 46.3
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 3.6e-12 77.8 112 39.3
Aa31sc233G30 Aethionema arabicum HOM05D006694 ORTHO05D008240 8.0e-12 76.6 174 32.8
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 8.0e-12 76.6 132 33.3
Aa31LG2G18100 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.0e-11 76.3 135 36.3
Cfa009864 Carpinus fangiana HOM05D006694 ORTHO05D008240 1.0e-11 76.3 160 31.9
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 1.4e-11 75.9 101 39.6
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 1.8e-11 75.5 97 40.2
AT4G28010 Arabidopsis thaliana HOM05D006694 ORTHO05D008240 2.3e-11 75.1 117 36.8
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.0e-11 74.7 187 32.6
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.0e-11 74.7 135 34.8
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.0e-11 74.7 135 34.8
A06p09550 Brassica napus HOM05D006694 ORTHO05D008240 3.0e-11 74.7 132 32.6
Aa31sc233G50 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.0e-11 74.3 138 36.2
MD15G1400000 Malus domestica HOM05D006694 ORTHO05D008240 8.8e-11 73.2 82 43.9
Dinv15034 Davidia involucrata HOM05D006694 ORTHO05D008240 1.2e-10 72.8 65 50.8
Glyma.07G147400 Glycine max HOM05D006694 ORTHO05D008240 1.2e-10 72.8 113 36.3
Lj1g0001110 Lotus japonicus HOM05D006694 ORTHO05D010126 2.0e-10 72.0 110 41.8
DCAR_024407 Daucus carota HOM05D006694 ORTHO05D008240 3.3e-10 71.2 76 50.0
Aa31LG2G18070 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.7e-10 70.5 135 35.6
Aa31LG2G18090 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.7e-10 70.5 135 35.6
Potri.009G069600 Populus trichocarpa HOM05D006694 ORTHO05D008240 2.2e-09 68.6 75 45.3
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.8e-09 68.2 130 32.3
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.8e-09 68.2 130 32.3
ATR0681G086 Amborella trichopoda HOM05D006694 ORTHO05D008240 4.8e-09 67.4 123 31.7
ATR1128G092 Amborella trichopoda HOM05D006694 ORTHO05D008240 8.2e-09 66.6 110 35.5
THA.LOC104809083 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.1e-08 66.2 127 29.9
Carub.0007s1279 Capsella rubella HOM05D006694 ORTHO05D008240 1.8e-08 65.5 85 37.6
Sabra09G0052500 Salix brachista HOM05D006694 ORTHO05D008240 3.1e-08 64.7 74 41.9
ATR0737G136 Amborella trichopoda HOM05D006694 ORTHO05D008240 4.1e-08 64.3 102 29.4
CANSAT78G1122 Cannabis sativa HOM05D000162 ORTHO05D000090 7.0e-08 63.5 141 25.5
Migut.N00244 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.2e-07 62.8 118 26.3
Lsat_1_v5_gn_2_63881 Lactuca sativa HOM05D006694 ORTHO05D008240 1.6e-07 62.4 58 44.8
Manes.01G178400 Manihot esculenta HOM05D006694 ORTHO05D008240 2.0e-07 62.0 61 39.3
Atru.chr3.2947 Acer truncatum HOM05D006694 ORTHO05D008240 3.5e-07 61.2 73 39.7
Atru.chr3.2963 Acer truncatum HOM05D006694 ORTHO05D008240 3.5e-07 61.2 73 39.7
Actinidia24456 Actinidia chinensis HOM05D006694 ORTHO05D008240 5.9e-07 60.5 56 42.9
Manes.09G016633 Manihot esculenta HOM05D000162 ORTHO05D000090 1.0e-06 59.7 188 23.9
arahy.Tifrunner.gnm1.ann1.B0BY4Q Arachis hypogaea HOM05D000891 ORTHO05D000761 1.3e-06 59.3 192 24.5
arahy.Tifrunner.gnm1.ann1.LDS0KH Arachis hypogaea HOM05D000891 ORTHO05D000761 1.3e-06 59.3 192 24.5
Ciclev10014456m.g Citrus clementina HOM05D006694 ORTHO05D008240 1.3e-06 59.3 56 57.1
THA.LOC104809084 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.3e-06 59.3 127 26.0
BolC8t52228H Brassica oleracea HOM05D000162 ORTHO05D000090 1.7e-06 58.9 118 27.1
HPP92_025503 Vanilla planifolia HOM05D062792 ORTHO05D008240 2.2e-06 58.5 104 28.8
HPP92_025533 Vanilla planifolia HOM05D062792 ORTHO05D008240 2.2e-06 58.5 104 28.8
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 2.9e-06 58.2 121 26.4
RcHm_v2.0_Chr7g0231581 Rosa chinensis HOM05D006694 ORTHO05D008240 3.8e-06 57.8 63 39.7
EL10Ac5g10449 Beta vulgaris HOM05D000162 ORTHO05D000090 6.5e-06 57.0 125 27.2
MD15G1399800 Malus domestica HOM05D006694 ORTHO05D008240 8.5e-06 56.6 56 55.4
TWI75G1134 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 8.5e-06 56.6 159 27.7


User provided reference genes

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