Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.6e-116 421.4 239 100.0
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.2e-67 258.5 232 71.6
Nitab4.5_0000062g0040 Nicotiana tabacum HOM05D004064 ORTHO05D284748 1.6e-39 167.2 165 64.2
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-31 141.0 143 58.0
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.9e-29 133.7 82 84.1
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-27 127.9 247 43.3
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.8e-27 127.1 135 58.5
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.6e-26 123.2 144 54.2
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 4.9e-25 119.0 168 47.6
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 4.9e-25 119.0 171 46.2
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 6.4e-25 118.6 229 43.2
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 1.1e-24 117.9 118 56.8
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 1.1e-24 117.9 118 56.8
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 1.1e-24 117.9 118 56.8
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 1.1e-24 117.9 118 56.8
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 4.2e-24 115.9 118 55.9
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 5.5e-24 115.5 118 55.1
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.1e-24 115.2 134 60.4
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.1e-24 115.2 234 41.5
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 9.3e-24 114.8 243 42.8
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 9.3e-24 114.8 118 55.1
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-23 114.4 118 57.6
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 3.5e-23 112.8 118 54.2
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 1.8e-22 110.5 118 54.2
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 5.1e-22 109.0 118 51.7
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 6.7e-22 108.6 244 38.5
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.4e-21 105.1 67 79.1
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 1.6e-20 104.0 118 52.5
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 2.8e-20 103.2 118 51.7
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.2e-20 102.1 243 33.7
Nitab4.5_0001547g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.6e-18 96.7 84 63.1
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 5.8e-18 95.5 107 49.5
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.7e-17 94.0 75 69.3
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.2e-17 93.6 79 65.8
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 6.5e-17 92.0 79 65.8
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 1.9e-16 90.5 220 34.5
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.6e-15 87.4 153 40.5
Solyc10g054675.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 2.1e-15 87.0 173 39.3
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.1e-15 87.0 74 60.8
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 3.5e-15 86.3 91 51.6
CAN.G1279.4 Capsicum annuum HOM05D004064 ORTHO05D009561 1.8e-14 84.0 101 47.5
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.8e-14 84.0 110 42.7
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 3.9e-14 82.8 90 47.8
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.1e-14 82.4 71 57.7
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 5.1e-14 82.4 201 33.3
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 5.1e-14 82.4 113 41.6
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.7e-14 82.0 112 41.1
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 8.7e-14 81.6 113 41.6
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 1.9e-13 80.5 110 41.8
Nitab4.5_0003194g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.5e-13 80.1 92 55.4
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.5e-13 80.1 113 40.7
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-13 80.1 113 40.7
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 2.5e-13 80.1 113 40.7
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 2.5e-13 80.1 113 40.7
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-13 80.1 113 40.7
Sopen12g025840 Solanum pennellii HOM05D000014 ORTHO05D011910 2.5e-13 80.1 83 53.0
CAN.G83.8 Capsicum annuum HOM05D004064 ORTHO05D009561 3.3e-13 79.7 101 45.5
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.3e-13 79.3 75 54.7
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 5.7e-13 79.0 110 41.8
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-13 79.0 113 40.7
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 5.7e-13 79.0 113 42.5
Nitab4.5_0000804g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.4e-13 78.6 110 44.5
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 7.4e-13 78.6 114 41.2
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 7.4e-13 78.6 113 40.7
CAN.G53.40 Capsicum annuum HOM05D004064 ORTHO05D009561 9.7e-13 78.2 71 52.1
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.3e-12 77.8 108 41.7
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.6e-12 77.4 89 50.6
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 1.6e-12 77.4 148 33.8
Sopen05g008970 Solanum pennellii HOM05D004064 ORTHO05D011910 1.6e-12 77.4 73 58.9
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 1.6e-12 77.4 114 40.4
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 2.2e-12 77.0 114 39.5
Nitab4.5_0007593g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.7e-12 76.3 76 48.7
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 3.7e-12 76.3 89 51.7
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 3.7e-12 76.3 89 51.7
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 3.7e-12 76.3 89 51.7
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 3.7e-12 76.3 89 51.7
Sopen09g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 3.7e-12 76.3 89 51.7
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 3.7e-12 76.3 89 51.7
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.7e-12 76.3 82 46.3
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 3.7e-12 76.3 71 60.6
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.7e-12 76.3 84 52.4
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 4.8e-12 75.9 96 42.7
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 4.8e-12 75.9 91 44.0
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 4.8e-12 75.9 91 45.1
Solyc07g032784.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 4.8e-12 75.9 89 52.8
Sopen02g003610 Solanum pennellii HOM05D000017 ORTHO05D000013 4.8e-12 75.9 89 51.7
Sopen06g016100 Solanum pennellii HOM05D004064 ORTHO05D009561 4.8e-12 75.9 101 40.6
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 4.8e-12 75.9 190 36.3
Sopen12g016630 Solanum pennellii HOM05D000017 ORTHO05D000013 4.8e-12 75.9 89 51.7
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 4.8e-12 75.9 89 51.7
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.3e-12 75.5 78 48.7
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.1e-11 74.7 71 53.5
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 1.1e-11 74.7 113 39.8
Sopen11g024290 Solanum pennellii HOM05D004064 ORTHO05D009909 1.1e-11 74.7 105 40.0
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.4e-11 74.3 119 42.9
Sopen01g026090 Solanum pennellii HOM05D006921 ORTHO05D009185 1.4e-11 74.3 89 49.4
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-11 74.3 89 50.6
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-11 74.3 89 50.6
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 1.4e-11 74.3 89 50.6
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-11 74.3 89 50.6
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-11 74.3 89 50.6
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-11 74.3 89 50.6
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-11 74.3 89 50.6
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-11 73.9 89 50.6
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-11 73.9 89 50.6
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-11 73.6 115 43.5
Sopen12g012540 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-11 73.6 89 50.6
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-11 73.6 89 49.4
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.1e-11 73.2 101 42.6
CAN.G257.9 Capsicum annuum HOM05D004064 ORTHO05D009561 4.1e-11 72.8 107 38.3
Peaxi162Scf00268g00039 Petunia axillaris HOM05D006921 ORTHO05D009185 4.1e-11 72.8 82 48.8
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.1e-11 72.8 83 48.2
CAN.G362.17 Capsicum annuum HOM05D004064 ORTHO05D009561 5.3e-11 72.4 71 50.7
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 5.3e-11 72.4 80 48.8
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 5.3e-11 72.4 89 50.6
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 5.3e-11 72.4 99 43.4
CAN.G391.3 Capsicum annuum HOM05D004064 ORTHO05D009561 6.9e-11 72.0 98 45.9
CAN.G4596.1 Capsicum annuum HOM05D004064 ORTHO05D009561 6.9e-11 72.0 104 40.4
Sopen03g014420 Solanum pennellii HOM05D004064 ORTHO05D011910 6.9e-11 72.0 60 61.7
PGSC0003DMG400046845 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.9e-11 72.0 95 44.2
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 9.0e-11 71.6 90 45.6
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 9.0e-11 71.6 103 40.8
Solyc03g044355.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 1.2e-10 71.2 89 49.4
Sopen01g011730 Solanum pennellii HOM05D004064 ORTHO05D009561 1.5e-10 70.9 111 40.5
Sopen10g027790 Solanum pennellii HOM05D006921 ORTHO05D009185 1.5e-10 70.9 113 43.4
PGSC0003DMG400011366 Solanum tuberosum HOM05D022869 ORTHO05D023010 1.5e-10 70.9 104 38.5
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.5e-10 70.9 66 60.6
Nitab4.5_0001547g0050 Nicotiana tabacum HOM05D004064 ORTHO05D284835 2.6e-10 70.1 147 42.9
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 2.6e-10 70.1 91 41.8
Sopen10g006650 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-10 70.1 89 48.3
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-10 70.1 70 52.9
Sopen05g013990 Solanum pennellii HOM05D000017 ORTHO05D009185 3.4e-10 69.7 91 49.5
Sopen07g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 4.5e-10 69.3 91 48.4
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 5.9e-10 68.9 80 43.8
CAN.G2.10 Capsicum annuum HOM05D004064 ORTHO05D009561 7.7e-10 68.6 72 50.0
Nitab4.5_0004688g0070 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.7e-10 68.6 112 40.2
Nitab4.5_0009324g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009561 7.7e-10 68.6 61 63.9
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 1.0e-09 68.2 68 47.1
Nitab4.5_0001977g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.3e-09 67.8 71 46.5
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 1.7e-09 67.4 101 39.6
Sopen07g022410 Solanum pennellii HOM05D004064 ORTHO05D011910 1.7e-09 67.4 76 50.0
PGSC0003DMG400029070 Solanum tuberosum HOM05D006921 ORTHO05D009185 1.7e-09 67.4 91 47.3
Nitab4.5_0001107g0130 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.9e-09 66.6 42 78.6
Peaxi162Scf00691g00312 Petunia axillaris HOM05D006921 ORTHO05D009185 2.9e-09 66.6 72 45.8
Solyc11g010817.1 Solanum lycopersicum HOM05D022869 ORTHO05D023010 2.9e-09 66.6 108 36.1
CAN.G630.48 Capsicum annuum HOM05D004064 ORTHO05D009561 3.8e-09 66.2 83 48.2
Nitab4.5_0002244g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.8e-09 66.2 83 47.0
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 3.8e-09 66.2 88 39.8
Peaxi162Scf00848g00013 Petunia axillaris HOM05D006921 ORTHO05D009185 3.8e-09 66.2 110 34.5
Nitab4.5_0000555g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.0e-09 65.9 65 55.4
Sopen10g021400 Solanum pennellii HOM05D000017 ORTHO05D009561 5.0e-09 65.9 88 38.6
Solyc07g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 6.5e-09 65.5 88 45.5
Sopen08g013500 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-09 65.5 72 48.6
Nitab4.5_0000268g0070 Nicotiana tabacum HOM05D006921 ORTHO05D023010 8.5e-09 65.1 74 45.9
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.4e-08 64.3 86 45.3
Peaxi162Scf00145g01531 Petunia axillaris HOM05D006921 ORTHO05D009185 1.4e-08 64.3 110 34.5
CAN.G548.9 Capsicum annuum HOM05D004064 ORTHO05D009561 2.5e-08 63.5 77 48.1
Nitab4.5_0000113g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.2e-08 63.2 88 45.5
Peaxi162Scf00579g00618 Petunia axillaris HOM05D006921 ORTHO05D009185 4.2e-08 62.8 89 43.8
Nitab4.5_0000021g0530 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.5e-08 62.4 63 57.1
Sopen12g028900 Solanum pennellii HOM05D037232 ORTHO05D009561 5.5e-08 62.4 96 40.6
Peaxi162Scf00270g00413 Petunia axillaris HOM05D004064 ORTHO05D009561 7.2e-08 62.0 114 36.8
Peaxi162Scf00022g00611 Petunia axillaris HOM05D004064 ORTHO05D009561 1.2e-07 61.2 115 34.8
PGSC0003DMG400034895 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.2e-07 61.2 69 47.8
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.1e-07 60.5 92 42.4
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 2.1e-07 60.5 77 44.2
PGSC0003DMG400006499 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.6e-07 59.3 67 46.3
Sopen07g007160 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.9 62 53.2
Peaxi162Scf00296g00035 Petunia axillaris HOM05D004064 ORTHO05D009561 7.9e-07 58.5 78 39.7
CAN.G1740.2 Capsicum annuum HOM05D004064 ORTHO05D009561 1.0e-06 58.2 54 55.6
Peaxi162Scf00033g00082 Petunia axillaris HOM05D004064 ORTHO05D009561 1.0e-06 58.2 77 42.9
CAN.G321.28 Capsicum annuum HOM05D004064 ORTHO05D009909 1.4e-06 57.8 76 42.1
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 1.4e-06 57.8 105 39.0
PGSC0003DMG400001253 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.8e-06 57.4 62 51.6
Solyc12g041930.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 5.1e-06 55.8 72 44.4
Nitab4.5_0000025g0440 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.8e-06 55.1 79 44.3


User provided reference genes

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