Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001495g0120 Nicotiana tabacum HOM05D000371 ORTHO05D008019 9.1e-111 403.7 216 100.0
Nitab4.5_0001002g0040 Nicotiana tabacum HOM05D000371 ORTHO05D008019 8.9e-42 174.5 126 77.8
Nitab4.5_0012064g0010 Nicotiana tabacum HOM05D000371 ORTHO05D008019 8.9e-42 174.5 126 77.8
Peaxi162Scf00440g00111 Petunia axillaris HOM05D000371 ORTHO05D008019 1.5e-41 173.7 126 77.0
PGSC0003DMG400006351 Solanum tuberosum HOM05D000371 ORTHO05D008019 2.2e-40 169.9 126 74.6
CAN.G1826.1 Capsicum annuum HOM05D000371 ORTHO05D008019 1.1e-39 167.5 126 73.8
Solyc04g011620.3 Solanum lycopersicum HOM05D000371 ORTHO05D008019 3.2e-39 166.0 124 74.2
Sopen04g005800 Solanum pennellii HOM05D000371 ORTHO05D008019 3.2e-39 166.0 124 74.2
SGA_v2.0_scaffold221G42682 Striga asiatica HOM05D000371 ORTHO05D008019 2.3e-37 159.8 126 67.5
MSTRG.8260 Avicennia marina HOM05D000371 ORTHO05D008019 8.7e-37 157.9 126 66.7
HanXRQChr10g0312861 Helianthus annuus HOM05D000371 ORTHO05D008019 8.7e-37 157.9 126 69.8
GSVIVG01016514001 Vitis vinifera HOM05D000371 ORTHO05D008019 1.9e-36 156.8 126 67.5
Dinv26032 Davidia involucrata HOM05D000371 ORTHO05D008019 3.3e-36 156.0 126 66.7
Zm00001eb289600 Zea mays HOM05D000371 ORTHO05D008019 3.3e-36 156.0 125 69.6
Cc02_g07590 Coffea canephora HOM05D000371 ORTHO05D008019 4.3e-36 155.6 126 66.7
Cpa.g.sc1.428 Carica papaya HOM05D000371 ORTHO05D008019 7.3e-36 154.8 125 65.6
Os05g0458100 Oryza sativa ssp. japonica HOM05D000371 ORTHO05D008019 7.3e-36 154.8 125 68.0
Sc11g0007880 Simmondsia chinensis HOM05D000371 ORTHO05D008019 9.6e-36 154.5 126 66.7
TAR636G0788 Trochodendron aralioides HOM05D000371 ORTHO05D008019 1.6e-35 153.7 125 66.4
TAR636G0917 Trochodendron aralioides HOM05D000371 ORTHO05D008019 1.6e-35 153.7 125 66.4
Ciclev10032851m.g Citrus clementina HOM05D000371 ORTHO05D008019 2.8e-35 152.9 126 63.5
LjContig00141g0009492 Lotus japonicus HOM05D000371 ORTHO05D008019 2.8e-35 152.9 126 65.1
Lalb_Chr04g0251111 Lupinus albus HOM05D000371 ORTHO05D008019 2.8e-35 152.9 126 63.5
PGR142G1272 Punica granatum HOM05D000371 ORTHO05D008019 3.6e-35 152.5 126 63.5
ECA238G3066 Erigeron canadensis HOM05D000371 ORTHO05D008019 4.8e-35 152.1 126 65.9
Manes.07G117900 Manihot esculenta HOM05D000371 ORTHO05D008019 6.2e-35 151.8 126 64.3
Lsat_1_v5_gn_2_118301 Lactuca sativa HOM05D000371 ORTHO05D008019 8.1e-35 151.4 126 66.7
Os01g0844300 Oryza sativa ssp. japonica HOM05D000371 ORTHO05D008019 8.1e-35 151.4 125 65.6
arahy.Tifrunner.gnm1.ann1.JFIJ48 Arachis hypogaea HOM05D000371 ORTHO05D008019 1.1e-34 151.0 125 64.8
vmacro05072 Vaccinium macrocarpon HOM05D000371 ORTHO05D008019 1.1e-34 151.0 152 57.2
Dinv06770 Davidia involucrata HOM05D000371 ORTHO05D008019 1.4e-34 150.6 126 64.3
Glyma.18G037300 Glycine max HOM05D000371 ORTHO05D008019 1.8e-34 150.2 125 64.8
Potri.008G057900 Populus trichocarpa HOM05D000371 ORTHO05D008019 1.8e-34 150.2 123 65.9
Cfa001451 Carpinus fangiana HOM05D000371 ORTHO05D008019 2.4e-34 149.8 125 64.0
Psat2g040520 Pisum sativum HOM05D000371 ORTHO05D008019 2.4e-34 149.8 143 59.4
AL5G36690 Arabidopsis lyrata HOM05D000371 ORTHO05D008019 4.0e-34 149.1 126 62.7
AT3G55520 Arabidopsis thaliana HOM05D000371 ORTHO05D008019 5.3e-34 148.7 126 62.7
BcaB01g00086 Brassica carinata HOM05D000371 ORTHO05D008019 5.3e-34 148.7 126 61.9
Haze_17090 Corylus avellana HOM05D000371 ORTHO05D008019 5.3e-34 148.7 125 64.0
Medtr5g080300 Medicago truncatula HOM05D000371 ORTHO05D008019 5.3e-34 148.7 143 58.0
RcHm_v2.0_Chr1g0367961 Rosa chinensis HOM05D000371 ORTHO05D008019 5.3e-34 148.7 126 64.3
Sp5g06960 Schrenkiella parvula HOM05D000371 ORTHO05D008019 5.3e-34 148.7 126 61.9
TWI38G0343 Tripterygium wilfordii HOM05D000371 ORTHO05D008019 5.3e-34 148.7 125 64.8
Atru.chr12.417 Acer truncatum HOM05D000371 ORTHO05D008019 6.9e-34 148.3 125 63.2
ATR0559G040 Amborella trichopoda HOM05D000371 ORTHO05D008019 6.9e-34 148.3 125 64.8
CiPaw.01G289600 Carya illinoinensis HOM05D000371 ORTHO05D008019 6.9e-34 148.3 125 62.4
DCAR_010468 Daucus carota HOM05D000371 ORTHO05D008019 6.9e-34 148.3 125 63.2
FAN01G1452 Fragaria x ananassa HOM05D000371 ORTHO05D008019 6.9e-34 148.3 126 65.1
FAN01G2167 Fragaria x ananassa HOM05D000371 ORTHO05D008019 6.9e-34 148.3 126 65.1
FAN03G2093 Fragaria x ananassa HOM05D000371 ORTHO05D008019 6.9e-34 148.3 126 64.3
THA.LOC104810039 Tarenaya hassleriana HOM05D000371 ORTHO05D008019 6.9e-34 148.3 126 61.1
TPR.G3468 Trifolium pratense HOM05D000371 ORTHO05D008019 6.9e-34 148.3 143 58.0
BcaB02g07683 Brassica carinata HOM05D000371 ORTHO05D008019 9.0e-34 147.9 126 61.1
BcaC07g39878 Brassica carinata HOM05D000371 ORTHO05D008019 9.0e-34 147.9 126 61.1
BolC8t50709H Brassica oleracea HOM05D000371 ORTHO05D008019 9.0e-34 147.9 126 61.1
Duzib114G0336 Durio zibethinus HOM05D000371 ORTHO05D008019 9.0e-34 147.9 124 64.5
Glyma.11G220100 Glycine max HOM05D000371 ORTHO05D008019 9.0e-34 147.9 125 64.0
Carub.0005s2225 Capsella rubella HOM05D000371 ORTHO05D008019 1.2e-33 147.5 126 61.9
MBI14_g04656_MAGBIO Magnolia biondii HOM05D000371 ORTHO05D008019 1.2e-33 147.5 125 62.4
Sabra08G0042500 Salix brachista HOM05D000371 ORTHO05D008019 1.2e-33 147.5 125 63.2
arahy.Tifrunner.gnm1.ann1.1L6ASM Arachis hypogaea HOM05D000371 ORTHO05D008019 1.5e-33 147.1 125 62.4
C08p30830 Brassica napus HOM05D000371 ORTHO05D008019 1.5e-33 147.1 126 60.3
FAN10G2093 Fragaria x ananassa HOM05D000371 ORTHO05D008019 1.5e-33 147.1 126 63.5
MD01G1136400 Malus domestica HOM05D000371 ORTHO05D008019 1.5e-33 147.1 126 62.7
Potri.010G201600 Populus trichocarpa HOM05D000371 ORTHO05D008019 1.5e-33 147.1 125 62.4
Aa31LG10G10550 Aethionema arabicum HOM05D000371 ORTHO05D008019 2.0e-33 146.7 126 61.1
FvH4_7g22820 Fragaria vesca HOM05D000371 ORTHO05D008019 2.0e-33 146.7 126 64.3
FAN06G1941 Fragaria x ananassa HOM05D000371 ORTHO05D008019 2.0e-33 146.7 126 64.3
FAN06G2012 Fragaria x ananassa HOM05D000371 ORTHO05D008019 2.0e-33 146.7 126 64.3
PSO339G5068 Papaver somniferum HOM05D000371 ORTHO05D008019 2.0e-33 146.7 126 62.7
PSO513G0068 Papaver somniferum HOM05D000371 ORTHO05D008019 2.0e-33 146.7 126 62.7
Phvul.001G233400 Phaseolus vulgaris HOM05D000371 ORTHO05D008019 2.0e-33 146.7 125 62.4
Prupe.2G238000 Prunus persica HOM05D000371 ORTHO05D008019 2.0e-33 146.7 126 61.9
Thecc.10G036900 Theobroma cacao HOM05D000371 ORTHO05D008019 2.6e-33 146.4 124 62.9
A09p48530 Brassica napus HOM05D000371 ORTHO05D008019 3.4e-33 146.0 126 60.3
BraA09t40305Z Brassica rapa HOM05D000371 ORTHO05D008019 3.4e-33 146.0 126 60.3
QL08p060252 Quercus lobata HOM05D000371 ORTHO05D008019 3.4e-33 146.0 125 62.4
QL08p060477 Quercus lobata HOM05D000371 ORTHO05D008019 3.4e-33 146.0 125 62.4
Sabra10G0155600 Salix brachista HOM05D000371 ORTHO05D008019 5.8e-33 145.2 123 63.4
MD07G1201400 Malus domestica HOM05D000371 ORTHO05D008019 7.6e-33 144.8 125 63.2
Migut.F01460 Erythranthe guttata HOM05D000371 ORTHO05D008019 9.9e-33 144.4 126 60.3
Gohir.A06G166600 Gossypium hirsutum HOM05D000371 ORTHO05D008019 9.9e-33 144.4 124 62.9
Gohir.D06G172100 Gossypium hirsutum HOM05D000371 ORTHO05D008019 9.9e-33 144.4 124 62.9
Gorai.010G201100 Gossypium raimondii HOM05D000371 ORTHO05D008019 9.9e-33 144.4 124 62.9
CANSAT56G3583 Cannabis sativa HOM05D000371 ORTHO05D008019 1.3e-32 144.1 125 58.4
Hund13781 Selenicereus undatus HOM05D000371 ORTHO05D008019 1.3e-32 144.1 125 62.4
CARHR165580 Cardamine hirsuta HOM05D000371 ORTHO05D008019 1.7e-32 143.7 126 60.3
Thhalv10010745m.g Eutrema salsugineum HOM05D000371 ORTHO05D008019 2.9e-32 142.9 126 59.5
Aqoxy2G02270 Aquilegia oxysepala HOM05D000371 ORTHO05D008019 4.9e-32 142.1 124 58.9
VMungo1383G3505 Vigna mungo HOM05D000371 ORTHO05D008019 4.9e-32 142.1 106 70.8
CsaV3_6G001250 Cucumis sativus L. HOM05D000371 ORTHO05D008019 1.4e-31 140.6 123 61.0
Lj8A82T52 Lonicera japonica HOM05D000371 ORTHO05D008019 1.4e-31 140.6 117 64.1
HPP92_019450 Vanilla planifolia HOM05D000371 ORTHO05D008019 1.9e-31 140.2 104 66.3
Actinidia02935 Actinidia chinensis HOM05D000371 ORTHO05D008019 2.4e-31 139.8 126 59.5
EL10Ac2g04725 Beta vulgaris HOM05D000371 ORTHO05D008019 7.1e-31 138.3 125 60.0
vmacro07056 Vaccinium macrocarpon HOM05D000371 ORTHO05D008019 7.1e-31 138.3 185 46.5
SEGI_15620 Sequoiadendron giganteum HOM05D000371 ORTHO05D008019 1.2e-30 137.5 106 61.3
SEGI_39657 Sequoiadendron giganteum HOM05D000371 ORTHO05D008019 1.2e-30 137.5 106 61.3
Ca_05882_v3 Cicer arietinum L. HOM05D000371 ORTHO05D008019 2.1e-30 136.7 134 58.2
MELO3C008222.2 Cucumis melo HOM05D000371 ORTHO05D008019 2.1e-30 136.7 123 59.3
Ah.16g102470 Amaranthus hybridus HOM05D003811 ORTHO05D008019 3.5e-30 136.0 106 67.0
Sed0007769 Sechium edule HOM05D000371 ORTHO05D008019 6.0e-30 135.2 123 57.7
CDE04G1493 Ceratophyllum demersum HOM05D000371 ORTHO05D008019 2.3e-29 133.3 126 57.9
COL.COLO4_15088 Corchorus olitorius HOM05D000371 ORTHO05D008019 3.6e-27 125.9 115 57.4
AUR62040720 Chenopodium quinoa HOM05D000371 ORTHO05D008019 1.1e-26 124.4 116 56.9
AUR62012115 Chenopodium quinoa HOM05D000371 ORTHO05D008019 1.4e-26 124.0 116 56.9
Pp3c15_21140 Physcomitrium patens HOM05D000371 ORTHO05D008019 5.3e-26 122.1 126 48.4
SMO143G0281 Selaginella moellendorffii HOM05D000371 ORTHO05D008019 5.3e-26 122.1 124 50.8
CSS0017369 Camellia sinensis var. sinensis HOM05D000371 ORTHO05D008019 6.9e-26 121.7 114 58.8
CBR_g11111 Chara braunii HOM05D000371 ORTHO05D008019 1.5e-25 120.6 126 48.4
ClCG11G006790 Citrullus lanatus HOM05D000371 ORTHO05D008019 3.4e-25 119.4 142 49.3
AagrBONN_evm.TU.Sc2ySwM_117.2045 Anthoceros agrestis HOM05D000371 ORTHO05D008019 2.9e-24 116.3 126 49.2
Rhsim03G0135800 Rhododendron simsii HOM05D000371 ORTHO05D008019 8.4e-24 114.8 139 50.4
Pp3c9_23060 Physcomitrium patens HOM05D000371 ORTHO05D008019 1.0e-21 107.8 123 46.3
Nn2g11167 Nelumbo nucifera HOM05D000371 ORTHO05D008019 2.1e-19 100.1 72 68.1
unitig_70.g32541 Utricularia gibba HOM05D000371 ORTHO05D008019 8.1e-19 98.2 72 66.7
EL10As1g23098 Beta vulgaris HOM05D000371 ORTHO05D008019 1.6e-14 84.0 57 66.7
HanXRQChr04g0123541 Helianthus annuus HOM05D000371 ORTHO05D008019 3.5e-14 82.8 71 59.2
HanXRQChr06g0164201 Helianthus annuus HOM05D000371 ORTHO05D008019 3.3e-12 76.3 86 53.5
EL10Ac5g11814 Beta vulgaris HOM05D000371 ORTHO05D026989 8.2e-11 71.6 69 55.1
HanXRQChr14g0433881 Helianthus annuus HOM05D000371 ORTHO05D008019 8.2e-11 71.6 67 58.2
HanXRQChr08g0222821 Helianthus annuus HOM05D000371 ORTHO05D008019 2.6e-09 66.6 39 79.5
SGA_v2.0_scaffold240G44133 Striga asiatica HOM05D000371 ORTHO05D001484 1.1e-07 61.2 107 39.3
AagrBONN_evm.TU.Sc2ySwM_344.3862 Anthoceros agrestis HOM05D000371 ORTHO05D001484 1.4e-07 60.8 100 36.0
Cre09.g398067 Chlamydomonas reinhardtii HOM05D000371 ORTHO05D001484 1.4e-07 60.8 101 39.6
CBR_g29656 Chara braunii HOM05D000371 ORTHO05D001484 9.3e-07 58.2 106 36.8
CBR_g29659 Chara braunii HOM05D000371 ORTHO05D001484 9.3e-07 58.2 106 36.8
Haze_26828 Corylus avellana HOM05D000371 ORTHO05D004982 1.2e-06 57.8 72 43.1
Zm00001eb241230 Zea mays HOM05D000371 ORTHO05D001484 1.2e-06 57.8 73 43.8
HanXRQChr02g0050401 Helianthus annuus HOM05D000371 ORTHO05D008019 1.6e-06 57.4 40 72.5
Mapoly0001s0304 Marchantia polymorpha HOM05D000371 ORTHO05D001484 3.6e-06 56.2 100 35.0
AT5G48570 Arabidopsis thaliana HOM05D000371 ORTHO05D001484 4.6e-06 55.8 78 41.0
MD10G1156300 Malus domestica HOM05D000371 ORTHO05D001484 4.6e-06 55.8 100 36.0
BraA06t26822Z Brassica rapa HOM05D000371 ORTHO05D001484 6.1e-06 55.5 78 41.0
Sc17g0001910 Simmondsia chinensis HOM05D000371 ORTHO05D001484 6.1e-06 55.5 73 41.1
Ah.08g218900 Amaranthus hybridus HOM05D000371 ORTHO05D001484 7.9e-06 55.1 73 39.7
Glyma.08G346700 Glycine max HOM05D000371 ORTHO05D001484 7.9e-06 55.1 73 42.5
Glyma.18G158100 Glycine max HOM05D000371 ORTHO05D001484 7.9e-06 55.1 73 42.5
Prupe.8G194100 Prunus persica HOM05D000371 ORTHO05D001484 7.9e-06 55.1 100 35.0


User provided reference genes

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