Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.7e-129 466.1 240 100.0
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.5e-122 443.0 240 94.2
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 4.5e-103 378.3 243 79.8
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 2.9e-102 375.6 231 84.0
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 1.9e-101 372.9 231 83.5
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 1.0e-99 367.1 231 82.7
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 1.1e-96 357.1 229 81.2
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.3e-73 280.4 240 65.4
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 1.2e-71 273.9 241 62.2
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 2.3e-70 269.6 238 62.6
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 1.1e-69 267.3 233 62.2
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 2.5e-69 266.2 235 59.6
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 9.5e-69 264.2 238 62.2
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 2.8e-68 262.7 235 59.6
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 1.4e-67 260.4 287 53.0
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 8.9e-67 257.7 237 58.6
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 8.9e-67 257.7 266 56.0
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 1.5e-66 256.9 241 60.6
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 9.9e-66 254.2 235 59.6
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 2.9e-65 252.7 241 56.0
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 6.4e-65 251.5 233 58.4
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 8.4e-65 251.1 241 60.2
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 1.1e-64 250.8 225 60.9
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 1.9e-64 250.0 236 56.8
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 1.9e-64 250.0 242 57.9
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 3.2e-64 249.2 234 56.8
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 4.1e-64 248.8 234 57.3
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 7.1e-64 248.1 241 59.3
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 7.1e-64 248.1 233 55.8
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 9.2e-64 247.7 239 56.5
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 4.6e-63 245.4 241 55.6
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 1.3e-62 243.8 238 57.6
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 1.3e-62 243.8 235 56.2
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 3.9e-62 242.3 241 56.4
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 5.1e-62 241.9 241 58.9
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 1.1e-61 240.7 241 54.4
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 4.3e-61 238.8 241 54.4
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 3.6e-60 235.7 241 53.9
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 4.0e-59 232.3 240 58.8
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 4.0e-59 232.3 242 53.7
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 5.2e-59 231.9 215 58.1
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 6.9e-59 231.5 243 56.8
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 6.9e-59 231.5 239 53.1
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 3.4e-58 229.2 235 53.2
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 7.6e-58 228.0 233 53.6
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 9.9e-58 227.6 231 56.7
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 2.2e-57 226.5 230 53.5
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 2.9e-57 226.1 227 53.3
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 2.9e-57 226.1 226 54.9
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 1.4e-56 223.8 228 52.2
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 1.9e-56 223.4 237 53.2
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 4.2e-56 222.2 258 49.2
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 7.1e-56 221.5 257 50.2
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 2.1e-55 219.9 220 55.0
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 2.7e-55 219.5 202 56.4
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 3.5e-55 219.2 238 52.9
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 6.0e-55 218.4 224 51.8
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 6.0e-55 218.4 221 54.3
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 6.0e-55 218.4 224 51.8
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 7.8e-55 218.0 201 54.2
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 1.3e-54 217.2 244 51.2
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.1e-53 214.2 224 51.3
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 1.5e-53 213.8 220 52.7
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 1.5e-53 213.8 179 58.7
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.9e-53 213.4 221 52.0
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.9e-53 213.4 221 52.0
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 1.9e-53 213.4 240 52.5
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 2.5e-53 213.0 241 53.5
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 5.6e-53 211.8 237 52.3
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 7.3e-53 211.5 237 54.0
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 9.6e-53 211.1 219 52.5
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 1.3e-52 210.7 240 51.7
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.6e-52 210.3 225 51.6
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 2.8e-52 209.5 201 52.7
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 2.8e-52 209.5 233 51.9
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 3.6e-52 209.1 200 63.0
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 1.8e-51 206.8 228 53.1
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 1.8e-51 206.8 235 52.3
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 9.0e-51 204.5 237 52.3
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 4.5e-50 202.2 238 49.2
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.7e-49 200.3 226 50.0
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 2.2e-49 199.9 237 50.6
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 2.9e-49 199.5 226 50.0
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 2.9e-49 199.5 236 51.7
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 6.4e-49 198.4 235 49.4
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 1.1e-48 197.6 237 50.6
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 2.4e-48 196.4 203 51.7
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 7.1e-48 194.9 214 54.7
MBI04_g31212_MAGBIO Magnolia biondii HOM05D004487 ORTHO05D005483 9.3e-48 194.5 226 50.9
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 2.1e-47 193.4 231 46.8
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 4.3e-45 185.7 234 47.9
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 1.6e-44 183.7 233 47.6
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 1.6e-44 183.7 240 51.2
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 8.1e-44 181.4 239 46.9
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 1.1e-43 181.0 232 47.0
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 3.1e-43 179.5 241 51.0
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 4.0e-43 179.1 226 47.3
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 2.0e-42 176.8 235 44.7
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 2.6e-42 176.4 234 45.7
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 1.7e-41 173.7 235 47.7
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 6.4e-41 171.8 121 68.6
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 1.4e-40 170.6 234 44.9
Dinv13358 Davidia involucrata HOM05D004487 ORTHO05D005483 3.2e-40 169.5 174 54.6
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 1.2e-39 167.5 202 48.5
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 1.6e-39 167.2 231 45.9
HanXRQChr07g0202331 Helianthus annuus HOM05D004487 ORTHO05D005483 2.1e-39 166.8 168 48.8
Lj4A903G12 Lonicera japonica HOM05D004487 ORTHO05D005483 1.3e-38 164.1 185 53.5
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.0e-38 162.9 173 49.7
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 5.1e-38 162.2 233 45.1
Actinidia33369 Actinidia chinensis HOM05D004487 ORTHO05D005483 1.1e-37 161.0 244 45.1
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 1.5e-37 160.6 237 43.9
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 4.3e-37 159.1 243 43.2
Dinv05687 Davidia involucrata HOM05D004487 ORTHO05D005483 1.3e-36 157.5 172 53.5
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 2.8e-36 156.4 230 44.8
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 3.7e-36 156.0 235 42.6
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 8.2e-36 154.8 233 42.9
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 8.2e-36 154.8 191 46.1
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 2.4e-35 153.3 231 44.6
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 5.3e-35 152.1 231 44.2
Os08g0290400 Oryza sativa ssp. japonica HOM05D004487 ORTHO05D005483 1.5e-34 150.6 238 40.3
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 1.0e-33 147.9 234 43.2
ATR0210G008 Amborella trichopoda HOM05D004487 ORTHO05D005483 6.5e-33 145.2 244 41.0
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 6.5e-33 145.2 217 41.9
Lj6g0018564 Lotus japonicus HOM05D004487 ORTHO05D005483 4.2e-32 142.5 106 63.2
Sabra05G0067500 Salix brachista HOM05D004487 ORTHO05D005483 5.5e-32 142.1 231 43.7
CSS0002847 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 2.1e-31 140.2 100 75.0
SHI54251 Sapria himalayana HOM05D004487 ORTHO05D005483 1.0e-30 137.9 243 42.0
HPP92_005242 Vanilla planifolia HOM05D004487 ORTHO05D005483 5.1e-30 135.6 201 42.3
CARHR247100 Cardamine hirsuta HOM05D004487 ORTHO05D005483 5.7e-29 132.1 236 41.5
Zm00001eb192330 Zea mays HOM05D004487 ORTHO05D005483 1.3e-28 131.0 199 40.2
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea HOM05D004487 ORTHO05D005483 2.2e-28 130.2 179 43.6
Sed0026038 Sechium edule HOM05D004487 ORTHO05D005483 9.0e-27 124.8 168 45.8
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 1.2e-26 124.4 204 37.3
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 2.0e-26 123.6 230 40.0
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 5.0e-25 119.0 172 43.6
CDE04G3300 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 4.2e-24 115.9 169 40.2
TWI53G0384 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 1.3e-22 110.9 240 35.4
FAN26G0673 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.4e-19 100.1 137 45.3
CDE06G2627 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 3.2e-16 89.7 173 34.7
Psat4g139880 Pisum sativum HOM05D004487 ORTHO05D005483 3.9e-14 82.8 147 38.8
arahy.Tifrunner.gnm1.ann1.PFH739 Arachis hypogaea HOM05D004487 ORTHO05D005483 6.7e-14 82.0 93 44.1
SGA_v2.0_scaffold83G26423 Striga asiatica HOM05D004487 ORTHO05D005483 8.8e-14 81.6 91 47.3
arahy.Tifrunner.gnm1.ann1.02EUR6 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.5e-13 80.9 120 36.7
Oeu043116.1 Olea europaea HOM05D004487 ORTHO05D005483 7.4e-13 78.6 159 34.0
Psat4g139920 Pisum sativum HOM05D004487 ORTHO05D005483 7.4e-13 78.6 147 38.1
arahy.Tifrunner.gnm1.ann1.PL6VNF Arachis hypogaea HOM05D004487 ORTHO05D005483 4.8e-12 75.9 93 41.9
CSS0015836 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 5.3e-11 72.4 39 94.9
CSS0022213 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 5.3e-11 72.4 39 94.9
Lalb_Chr12g0203581 Lupinus albus HOM05D004487 ORTHO05D005483 5.3e-11 72.4 227 32.6
arahy.Tifrunner.gnm1.ann1.3C43J1 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.2e-10 71.2 112 41.1
arahy.Tifrunner.gnm1.ann1.E9WDF1 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.4e-10 69.7 98 43.9
ATR0730G218 Amborella trichopoda HOM05D004487 ORTHO05D005483 5.9e-10 68.9 149 35.6
arahy.Tifrunner.gnm1.ann1.RJV3W7 Arachis hypogaea HOM05D004487 ORTHO05D005483 7.7e-10 68.6 112 40.2
BcaNung00884 Brassica carinata HOM05D004487 ORTHO05D032747 1.0e-06 58.2 68 48.5
arahy.Tifrunner.gnm1.ann1.94164M Arachis hypogaea HOM05D004487 ORTHO05D005483 2.3e-06 57.0 89 40.4
arahy.Tifrunner.gnm1.ann1.FJ4QJG Arachis hypogaea HOM05D004487 ORTHO05D005483 3.9e-06 56.2 89 40.4


User provided reference genes

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