Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001490g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-116 421.4 211 100.0
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-54 215.7 221 55.7
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-53 213.4 230 53.0
Nitab4.5_0006718g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-46 188.3 228 49.1
Nitab4.5_0008316g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-45 187.6 204 56.4
Nitab4.5_0000580g0310 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-43 179.9 182 58.8
Nitab4.5_0001523g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-43 178.7 241 45.6
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-42 176.0 288 42.4
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.7e-42 174.5 179 55.9
Nitab4.5_0000049g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-41 172.9 209 49.8
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.3e-41 172.6 170 60.0
Nitab4.5_0001282g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.7e-41 171.0 211 50.2
Nitab4.5_0001556g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-39 166.4 160 59.4
Nitab4.5_0003622g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.7e-38 161.4 105 74.3
Nitab4.5_0000009g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-37 159.8 136 63.2
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-36 156.0 184 53.3
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.2e-36 154.8 184 52.2
Nitab4.5_0000415g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.4e-36 154.5 173 52.0
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.4e-36 154.5 136 59.6
Nitab4.5_0007229g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-35 154.1 123 65.0
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-35 152.5 192 49.0
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-35 152.1 187 49.2
Nitab4.5_0003433g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-33 147.1 229 42.8
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-33 146.4 186 50.5
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.3e-33 145.6 180 51.7
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.7e-33 145.2 226 42.0
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.4e-33 144.8 135 58.5
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-31 139.8 208 44.2
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-31 139.0 171 50.9
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-30 136.7 264 38.6
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-30 136.3 171 50.3
Nitab4.5_0000151g0380 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-29 133.3 208 41.8
Nitab4.5_0000774g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-29 133.3 173 46.8
Nitab4.5_0000285g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-29 132.1 106 64.2
Nitab4.5_0000220g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.5e-29 131.7 123 59.3
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.5e-29 131.3 177 45.2
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.5e-29 131.3 120 59.2
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.5e-28 128.6 106 63.2
Nitab4.5_0002496g0090 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.2e-28 128.3 229 40.2
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.2e-28 128.3 212 41.5
Nitab4.5_0000931g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-27 127.5 129 57.4
Nitab4.5_0000007g0330 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-27 127.1 163 46.0
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 4.7e-27 125.6 135 47.4
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-27 125.6 177 45.2
Nitab4.5_0002232g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.9e-27 124.8 101 62.4
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-26 123.2 106 61.3
Nitab4.5_0006915g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-26 122.9 183 45.4
Nitab4.5_0004353g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.1e-26 122.1 193 43.5
Nitab4.5_0008724g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.1e-26 122.1 120 58.3
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 8.8e-26 121.3 137 47.4
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.8e-26 121.3 206 40.3
Nitab4.5_0002925g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-24 117.5 97 67.0
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-24 117.1 106 58.5
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 3.7e-24 115.9 142 42.3
Nitab4.5_0000644g0170 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.8e-24 115.5 115 56.5
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.3e-24 115.2 203 41.4
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-23 114.0 107 57.9
Nitab4.5_0000524g0120 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-23 112.8 108 60.2
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 7.0e-23 111.7 168 42.9
PGSC0003DMG400042577 Solanum tuberosum HOM05D001309 ORTHO05D000385 9.1e-23 111.3 135 48.9
Nitab4.5_0003690g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.5e-22 109.0 60 86.7
Nitab4.5_0002385g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.7e-22 108.2 120 55.0
Nitab4.5_0002530g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-21 107.5 105 56.2
Nitab4.5_0001369g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-21 106.3 72 72.2
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-21 105.9 242 37.2
Nitab4.5_0014570g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-21 105.5 179 39.1
Nitab4.5_0001132g0060 Nicotiana tabacum HOM05D001309 ORTHO05D009935 6.5e-21 105.1 165 43.6
Nitab4.5_0000318g0200 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.5e-21 104.8 175 41.7
Nitab4.5_0000740g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.5e-21 104.8 66 75.8
Nitab4.5_0000522g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-20 103.6 118 48.3
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.5e-20 102.1 217 36.9
Nitab4.5_0003703g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.5e-20 102.1 201 39.8
Nitab4.5_0007152g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.5e-20 102.1 135 47.4
Nitab4.5_0001388g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.2e-20 101.7 106 52.8
Nitab4.5_0002263g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-18 97.8 73 68.5
Nitab4.5_0008635g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-18 97.4 143 45.5
Solyc04g150151.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 5.2e-18 95.5 104 46.2
Nitab4.5_0007969g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-17 94.0 69 68.1
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-17 93.6 78 60.3
Nitab4.5_0002419g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.7e-17 92.0 101 55.4
PGSC0003DMG400039811 Solanum tuberosum HOM05D001309 ORTHO05D000385 7.5e-17 91.7 66 63.6
Nitab4.5_0000866g0110 Nicotiana tabacum HOM05D001309 ORTHO05D009935 1.7e-16 90.5 185 35.1
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 1.7e-16 90.5 102 43.1
Nitab4.5_0003611g0020 Nicotiana tabacum HOM05D001309 ORTHO05D009935 2.8e-16 89.7 123 43.9
Nitab4.5_0003082g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-15 86.7 57 70.2
Nitab4.5_0006065g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-14 83.2 68 54.4
Nitab4.5_0014949g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-14 83.2 176 40.3
Solyc04g150152.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 1.3e-13 80.9 101 41.6
Nitab4.5_0001481g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-13 80.5 121 47.9
Nitab4.5_0002263g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-13 79.7 97 50.5
Nitab4.5_0003283g0020 Nicotiana tabacum HOM05D001309 ORTHO05D009935 5.0e-13 79.0 164 37.8
Nitab4.5_0010441g0020 Nicotiana tabacum HOM05D001309 ORTHO05D009935 8.5e-13 78.2 65 60.0
Nitab4.5_0003970g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-12 77.8 134 41.8
Nitab4.5_0016483g0020 Nicotiana tabacum HOM05D001309 ORTHO05D009935 1.9e-12 77.0 65 60.0
Nitab4.5_0002263g0080 Nicotiana tabacum HOM05D001309 ORTHO05D009935 1.8e-10 70.5 49 67.3
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.0e-10 69.7 143 35.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 8.8e-10 68.2 107 41.1
Nitab4.5_0001903g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-09 67.4 151 35.1
Nitab4.5_0003082g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-09 67.0 94 45.7
MBI10_g17725_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.6e-09 66.6 124 33.1
TWI34G1252 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.6e-09 66.6 121 32.2
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 9.8e-09 64.7 130 32.3
Nitab4.5_0003836g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.8e-09 64.7 46 69.6
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.8e-09 64.7 116 37.1
TAR623G0534 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.8e-09 64.7 129 31.8
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.3e-08 64.3 117 34.2
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.3e-08 64.3 117 34.2
Nitab4.5_0001086g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-08 63.9 49 63.3
Nitab4.5_0017010g0010 Nicotiana tabacum HOM05D001309 ORTHO05D009935 1.7e-08 63.9 41 75.6
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.7e-08 63.9 123 35.8
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.8e-08 63.2 115 36.5
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 6.3e-08 62.0 114 33.3
TAR472G0003 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.3e-08 62.0 124 33.9
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.1e-07 61.2 116 31.0
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 61.2 133 30.8
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 61.2 134 29.9
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-07 60.8 127 30.7
Sopen04g022360 Solanum pennellii HOM05D001309 ORTHO05D000385 1.4e-07 60.8 72 43.1
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-07 60.8 140 30.7
Nitab4.5_0001128g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-07 60.5 52 55.8
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.8e-07 60.5 112 33.9
TAR633G2694 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.4e-07 60.1 140 29.3
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.1e-07 59.7 154 27.9
Nitab4.5_0002768g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-07 59.7 56 58.9
COL.COLO4_33862 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.1e-07 59.3 117 36.8
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.1e-07 59.3 115 33.0
TAR374G1143 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.1e-07 59.3 109 34.9
MBI15_g14066_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.0e-07 58.5 116 31.0
Nitab4.5_0008623g0010 Nicotiana tabacum HOM05D001309 ORTHO05D009935 7.0e-07 58.5 36 72.2
TWI53G0470 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 7.0e-07 58.5 114 32.5
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 9.1e-07 58.2 114 32.5
Nitab4.5_0010582g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-06 57.8 73 50.7
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 1.2e-06 57.8 105 31.4
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.6e-06 57.4 113 31.0
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 2.0e-06 57.0 122 32.8
Nitab4.5_0000440g0120 Nicotiana tabacum HOM05D001309 ORTHO05D009935 2.7e-06 56.6 59 47.5
Nitab4.5_0003970g0040 Nicotiana tabacum HOM05D001309 ORTHO05D009935 2.7e-06 56.6 39 69.2
Nitab4.5_0001313g0030 Nicotiana tabacum HOM05D001309 ORTHO05D009935 3.5e-06 56.2 55 58.2
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.5e-06 56.2 122 32.8
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 3.5e-06 56.2 122 32.8
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.5e-06 56.2 122 32.8
Nitab4.5_0014949g0020 Nicotiana tabacum HOM05D001309 ORTHO05D009935 4.5e-06 55.8 57 54.4


User provided reference genes

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