Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 3.6e-98 362.1 260 100.0
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 2.7e-69 266.2 252 61.1
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 4.5e-64 248.8 251 79.7
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 5.9e-64 248.4 252 58.7
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 2.5e-62 243.0 235 60.0
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.0e-52 211.1 251 76.1
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 6.8e-36 155.2 261 39.8
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 1.1e-33 147.9 259 40.9
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 2.4e-33 146.7 268 49.3
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 3.1e-33 146.4 262 38.9
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 9.1e-33 144.8 262 49.2
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 2.9e-31 139.8 250 36.8
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 2.5e-30 136.7 262 35.5
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 5.5e-30 135.6 250 36.8
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.6e-29 134.0 263 35.4
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 4.7e-29 132.5 264 58.0
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 1.0e-28 131.3 267 43.8
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 5.2e-28 129.0 262 35.5
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 5.2e-28 129.0 254 34.6
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 6.8e-28 128.6 260 35.0
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 1.2e-27 127.9 252 33.3
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 1.5e-27 127.5 262 34.0
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 2.0e-27 127.1 250 34.8
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 2.6e-27 126.7 262 36.3
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 5.7e-27 125.6 255 34.1
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 9.8e-27 124.8 262 35.5
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 1.3e-26 124.4 252 32.9
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 1.3e-26 124.4 272 34.6
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 1.7e-26 124.0 262 35.5
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 1.7e-26 124.0 258 33.7
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 1.7e-26 124.0 261 34.9
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 2.8e-26 123.2 250 32.8
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 2.8e-26 123.2 255 36.1
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 8.3e-26 121.7 298 31.2
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 1.4e-25 120.9 268 33.2
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 1.8e-25 120.6 250 36.0
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 2.4e-25 120.2 265 32.1
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 2.4e-25 120.2 268 32.5
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 3.1e-25 119.8 263 35.0
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 4.1e-25 119.4 271 33.2
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 5.4e-25 119.0 250 34.0
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 5.4e-25 119.0 250 34.0
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 9.2e-25 118.2 269 31.6
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 9.2e-25 118.2 258 34.9
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 1.2e-24 117.9 263 32.7
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 1.2e-24 117.9 263 35.0
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 1.2e-24 117.9 250 32.8
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 1.6e-24 117.5 250 33.2
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 1.6e-24 117.5 247 33.2
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 4.5e-24 115.9 270 43.3
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 4.5e-24 115.9 263 32.3
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 1.3e-23 114.4 261 31.4
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 3.8e-23 112.8 263 33.8
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 5.0e-23 112.5 250 32.0
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 6.6e-23 112.1 262 30.9
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.5e-22 110.9 256 32.4
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 7.3e-22 108.6 267 31.8
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.6e-21 107.5 267 30.7
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 3.6e-21 106.3 240 32.1
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 5.2e-20 102.4 278 38.5
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 5.2e-20 102.4 278 38.5
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 8.9e-20 101.7 244 32.4
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 2.2e-18 97.1 282 29.1
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 8.3e-18 95.1 310 27.7
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 1.1e-17 94.7 273 40.7
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 1.8e-17 94.0 251 39.8
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 2.4e-17 93.6 141 41.8
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 3.2e-17 93.2 313 28.8
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 2.0e-16 90.5 249 28.9
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 2.7e-16 90.1 196 31.6
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 4.6e-16 89.4 236 29.7
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.0e-15 88.2 254 29.5
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 1.1e-14 84.7 138 39.1
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 5.6e-14 82.4 158 34.8
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 2.8e-13 80.1 235 28.1
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 4.7e-13 79.3 334 26.3
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 6.2e-13 79.0 220 29.1
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 1.4e-12 77.8 155 36.1
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 3.1e-12 76.6 220 28.6
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 8.9e-12 75.1 148 31.8
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 1.2e-11 74.7 53 67.9
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.2e-11 74.7 254 27.2
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.0e-11 73.9 93 48.4
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 3.4e-11 73.2 53 69.8
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 3.4e-11 73.2 264 25.8
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 4.4e-11 72.8 83 53.0
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 5.8e-11 72.4 287 26.1
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 5.8e-11 72.4 85 45.9
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 7.5e-11 72.0 250 26.4
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 9.8e-11 71.6 79 48.1
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 6.4e-10 68.9 71 53.5
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.1e-09 68.2 215 27.9
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 3.2e-09 66.6 93 40.9
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 5.4e-09 65.9 111 36.9
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 7.0e-09 65.5 49 65.3
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 9.2e-09 65.1 210 25.7
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.2e-08 64.7 347 23.3
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 1.6e-08 64.3 144 30.6
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 1.6e-08 64.3 45 71.1
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 1.6e-08 64.3 63 58.7
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 1.6e-08 64.3 53 62.3
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 4.6e-08 62.8 128 32.0
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 7.8e-08 62.0 86 43.0
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 1.0e-07 61.6 143 32.2
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 3.0e-07 60.1 45 66.7
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 6.6e-07 58.9 62 51.6
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 1.9e-06 57.4 254 26.8
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 2.5e-06 57.0 79 46.8
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 7.3e-06 55.5 79 39.2


User provided reference genes

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